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The map label for this gene is 16125680

Identifier: 16125680

GI number: 16125680

Start: 1582081

End: 1583547

Strand: Direct

Name: 16125680

Synonym: CC_1431

Alternate gene names: NA

Gene position: 1582081-1583547 (Clockwise)

Preceding gene: 16125679

Following gene: 16125681

Centisome position: 39.39

GC content: 67.35

Gene sequence:

>1467_bases
ATGGTCGGCATCGCCGCCTGGGGCGCGTATGCGCCGCGATTGCGTTTGAGCCGCAAGGCCGTCACCGAGGCCAACGCCTG
GGTTGCGCCGAACCTCAAGGCCAAGGGCAAGGGCGAGCGGTCCATGGCCAACTGGGACGAGGACGCCCTGACCATGGCGG
TCGAGGCGGCGCGCGACGCGCTCGGGCCCGACGATGATCGCTCGCACATCGCCAGCCTCTATTTCGCCTCGACGACGGCG
CCGTTCGCCGACCGCCTGAACGCCGGGATAGTGTCGGCGGCGCTCACCTTGGAAAAGTCGATCACGGCCAGCGACGTGAC
GGGCTCGCAGCGTTGTGGGCTGACGGCGCTGGGGCAGGCGCTCGCCGCCGGCGGAACCGCGCTGGTCGCGGTGGGCGAGC
GCCGCAAGGCCCGCGCGGTCTCGGCCCAGGAGCTGGACTTCGGCGACGGCGCGGCCGCCTTCGTGATCTCTGATGGTCCC
GGCGCGGCCGAGTTCCTGGGGCGTGGCAGTGTCACCGACGACTTCGTCGACCACTTCCGGGGCGATGACGGCGGCTTTGA
CTACTACTGGGAAGAGCGGTGGATCCGCGACGAGGGCATCGTCAAGCTGGTCCCGCCGGCGATCCGCAAGGCGCTTGAGG
TTTCGGGGTTAAGCGCCTCGGATGTCGATCATTTCTGCTTCCCGTCAACATTCTCCGGCATGGCCGCCACCGTGGCGAAG
TCGGTCGGGATCAAGCCTGAGGCGGTCCGCGACAACCTCGCCGCCTTGATGGGCGAGGCGGGCTGCGCGCATGGCCCGAT
CATGCTGGCCCACGCGCTGGAGCAGGCCAAGGCCGGCGAGATCATCCTCGTCGCCCAATTCGGCCAAGGCGCAGAGGCCC
TGGTGTTCCGGGCCACGGGCGAAGGAACGCGCCCGGCGCGCGGCGTGACGGGGTCGCTCGCCGATCGAGAAGTCGAGACC
AACTATCTGAAATTCCTGACCTTCAACGGCCTTGTTGACTGGGAAAAGGGGATGCGGGCCGAGAAGGACAACAAGACGGC
CCTGACCACCCTTTATCGCAACGAGGACATGATCCTGGGCCTGGTCGGCGGCCGCTGCCGCGAGACGGGCGTCATCCAGT
TCCCGCGCACCCGCATCTCGGTGGCGCCGAACAATCCCGCCGTCGACACCCAGGAGCCGTACAAGTTCGCCGAGCGACGT
GCGAGCATTCTCAGCTATTCCGCTGATTACCTGACCTTTTCCATGGCGCCGCCGAACCACTACGGCATGGTCGTCTTCGA
GGGCGGTGGTCGGATCATGATGGACATCACCGACGTGTCTCCAGGCGACGTCGAGACCGGCCTACCGGTGCGGATGGTGT
TCCGTATCAAGGAAGTCGACGAGAAGCGCGGCTTCGTCCGCTACTTCTGGAAGGCGACGCCCGACCGCGCCGCCATCGCC
GCGCAAACCGCTCAAGCCGCCGAATAG

Upstream 100 bases:

>100_bases
CCGCGCCCCGCTAACGTCGGGGCACGATTGCCGTCCGTTTCCGCGAGCGTAAGCTGACCGTCGATAAGTCGGGAAGAGCC
CGACGGTCAGGGAGCGAGAC

Downstream 100 bases:

>100_bases
GGAGACCGACATGCCTCAAGGTATCCGCGACAAGGTCGCCATTCTCGGGATGGGCTGTTCGAAGTTCGGCGAGCGCTGGG
ACGCCGGCCCCGACGACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MVGIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDALGPDDDRSHIASLYFASTTA
PFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQALAAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGP
GAAEFLGRGSVTDDFVDHFRGDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVAK
SVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRATGEGTRPARGVTGSLADREVET
NYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNEDMILGLVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERR
ASILSYSADYLTFSMAPPNHYGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDRAAIA
AQTAQAAE

Sequences:

>Translated_488_residues
MVGIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDALGPDDDRSHIASLYFASTTA
PFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQALAAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGP
GAAEFLGRGSVTDDFVDHFRGDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVAK
SVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRATGEGTRPARGVTGSLADREVET
NYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNEDMILGLVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERR
ASILSYSADYLTFSMAPPNHYGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDRAAIA
AQTAQAAE
>Mature_488_residues
MVGIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDALGPDDDRSHIASLYFASTTA
PFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQALAAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGP
GAAEFLGRGSVTDDFVDHFRGDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVAK
SVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRATGEGTRPARGVTGSLADREVET
NYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNEDMILGLVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERR
ASILSYSADYLTFSMAPPNHYGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDRAAIA
AQTAQAAE

Specific function: Unknown

COG id: COG3425

COG function: function code I; 3-hydroxy-3-methylglutaryl CoA synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0219 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013751
- InterPro:   IPR013747
- InterPro:   IPR004656
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]

EC number: NA

Molecular weight: Translated: 52275; Mature: 52275

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDA
CCEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LGPDDDRSHIASLYFASTTAPFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQA
CCCCCCHHHHHHEEEECCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LAAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGPGAAEFLGRGSVTDDFVDHFR
HHCCCEEEEEECCCHHHHCCCHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHC
GDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVAK
CCCCCCCEEECCCEECCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
SVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRATG
HCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC
EGTRPARGVTGSLADREVETNYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNEDMILG
CCCCCCCCCCCCCCCCHHHCCEEEEEEECCEEEHHHCCCCCCCCCEEEEEEEECCCEEEE
LVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERRASILSYSADYLTFSMAPPNH
ECCCCCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
YGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDRAAIA
EEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEHHHHHCCCEEEEEEECCCCHHHHH
AQTAQAAE
HHHHHCCC
>Mature Secondary Structure
MVGIAAWGAYAPRLRLSRKAVTEANAWVAPNLKAKGKGERSMANWDEDALTMAVEAARDA
CCEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LGPDDDRSHIASLYFASTTAPFADRLNAGIVSAALTLEKSITASDVTGSQRCGLTALGQA
CCCCCCHHHHHHEEEECCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LAAGGTALVAVGERRKARAVSAQELDFGDGAAAFVISDGPGAAEFLGRGSVTDDFVDHFR
HHCCCEEEEEECCCHHHHCCCHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHC
GDDGGFDYYWEERWIRDEGIVKLVPPAIRKALEVSGLSASDVDHFCFPSTFSGMAATVAK
CCCCCCCEEECCCEECCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
SVGIKPEAVRDNLAALMGEAGCAHGPIMLAHALEQAKAGEIILVAQFGQGAEALVFRATG
HCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC
EGTRPARGVTGSLADREVETNYLKFLTFNGLVDWEKGMRAEKDNKTALTTLYRNEDMILG
CCCCCCCCCCCCCCCCHHHCCEEEEEEECCEEEHHHCCCCCCCCCEEEEEEEECCCEEEE
LVGGRCRETGVIQFPRTRISVAPNNPAVDTQEPYKFAERRASILSYSADYLTFSMAPPNH
ECCCCCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
YGMVVFEGGGRIMMDITDVSPGDVETGLPVRMVFRIKEVDEKRGFVRYFWKATPDRAAIA
EEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEHHHHHCCCEEEEEEECCCCHHHHH
AQTAQAAE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA