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The map label for this gene is 16125620

Identifier: 16125620

GI number: 16125620

Start: 1522902

End: 1523327

Strand: Direct

Name: 16125620

Synonym: CC_1371

Alternate gene names: NA

Gene position: 1522902-1523327 (Clockwise)

Preceding gene: 16125619

Following gene: 16125622

Centisome position: 37.91

GC content: 63.62

Gene sequence:

>426_bases
GTGGCGAAGGGGCCAAACGCCTTCCGCACGATCTCCGAAGCCGCCGAGGAGCTTGGCGTGCCGCAGCACGTGCTTCGCTT
CTGGGAAACAAAATTCTCTTTCATCCGCCCGATGAAACGCGCCGGTGGGCGCCGATTCTATCGTCCACAGGACATCGCTG
TTCTGAATGGCGTCCGCACCCTGCTGCACAGCGAAGGGCTGACCATCAAGGGCGTCCAGAAGCTGCATCGCGATCATGGG
CTGGCGCACGTGATCGCCGCCGGGCTGGGATCCAACGGTTCGGCGAGTCTGGAAGCTGAATATGACTATGCGCCGCGGGG
CAAAGAGCGCCCTGTCGGCGAGGAGACGCGGGACCGACTGGCGTTCGCGCTCGCCGATCTTACCGCGATCAAATCCCGCC
TCGACGGACTTTTGGCGCGCGGTTGA

Upstream 100 bases:

>100_bases
GCCCGCTGAGATCGAGCCGCGGCGCGTGATCGGCTTCCGCGCTTCGCAGGTCATGAAGGCGCGCATCGATCGCGCTCTGG
GCGGCTAAGGATCGATTGCG

Downstream 100 bases:

>100_bases
TTTCTGTCCAAATCGGTGTTGCCCAAGGGCAGGGCGGCGCCTATAAGGGCGCTCCTTCCGCGTCGGAGCGTGGCGCAGCC
TGGTAGCGCACTTGACTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAKGPNAFRTISEAAEELGVPQHVLRFWETKFSFIRPMKRAGGRRFYRPQDIAVLNGVRTLLHSEGLTIKGVQKLHRDHG
LAHVIAAGLGSNGSASLEAEYDYAPRGKERPVGEETRDRLAFALADLTAIKSRLDGLLARG

Sequences:

>Translated_141_residues
MAKGPNAFRTISEAAEELGVPQHVLRFWETKFSFIRPMKRAGGRRFYRPQDIAVLNGVRTLLHSEGLTIKGVQKLHRDHG
LAHVIAAGLGSNGSASLEAEYDYAPRGKERPVGEETRDRLAFALADLTAIKSRLDGLLARG
>Mature_140_residues
AKGPNAFRTISEAAEELGVPQHVLRFWETKFSFIRPMKRAGGRRFYRPQDIAVLNGVRTLLHSEGLTIKGVQKLHRDHGL
AHVIAAGLGSNGSASLEAEYDYAPRGKERPVGEETRDRLAFALADLTAIKSRLDGLLARG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15520; Mature: 15389

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGPNAFRTISEAAEELGVPQHVLRFWETKFSFIRPMKRAGGRRFYRPQDIAVLNGVRT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LLHSEGLTIKGVQKLHRDHGLAHVIAAGLGSNGSASLEAEYDYAPRGKERPVGEETRDRL
HHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
AFALADLTAIKSRLDGLLARG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKGPNAFRTISEAAEELGVPQHVLRFWETKFSFIRPMKRAGGRRFYRPQDIAVLNGVRT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LLHSEGLTIKGVQKLHRDHGLAHVIAAGLGSNGSASLEAEYDYAPRGKERPVGEETRDRL
HHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
AFALADLTAIKSRLDGLLARG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]