| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is iolC [H]
Identifier: 16125547
GI number: 16125547
Start: 1444394
End: 1446322
Strand: Direct
Name: iolC [H]
Synonym: CC_1298
Alternate gene names: 16125547
Gene position: 1444394-1446322 (Clockwise)
Preceding gene: 16125546
Following gene: 16125548
Centisome position: 35.96
GC content: 66.36
Gene sequence:
>1929_bases ATGGCCCAGGACGCAAAGACCCTTGATCTGATCGCGGTGGGCCGTTCGAGCGTCGATCTCTACGGCCAACAGGTCGGCGG ACGTCTTGAGGACATGGGGTCGTTCGCCAAGTACCTGGGCGGGAGCCCCACCAACACCGCCGCCGGCGGCGCACGGTTGG GCTTGAAGACCGGTCTTCTGACCCGGGTCGGCGCCGATCACATGGGACGTTTCATCCGCGAGCAACTGGAACGCGAGGGC GTCGACGTTGCGGGCGTGCTCTCTGATCCCGATCGTCTGACCGCTCTGGTGATCCTGGGCATTCGCGACCGCGTGAACTT CCCGCTGATCTTCTATCGCGAGAACTGCGCCGACATGGCGCTTGAGCCGTCGGATGTCGACGAGGCCTGGTTTGCTCAGG CAGGCGCAGTTCTGATCAACGGCACCCACCTCTCGCAGCCCAACGTCTACGAGACCAGCCTCAAGGCGGCTCGCGCCGTG AAGGCTGCGGGGGGGCGTGTCGCCTTCGACATCGACTATCGCCCCGTGCTGTGGGGCCTGACCGGCAAGGACGCCGGCGA GAACCGGTTCGTCGAGAACCAGCAGGTCACCGCAAAGCTGCAGGAAGTGGTGGCGCTGTGCGATCTGATCGTCGGCACCG AAGAAGAGATTCACATCCTGGGCGGTTCCACCGACACGATCGCCGCGCTCCGGGCGATCCGGAGGGCCTCTGACGCCCTG CTGGTCTGCAAGCGTGGCCCCGAAGGCTGTGTCGCGTTCCCAGGCGCGATTCCGGACGCCCTGGACGAAGGGGTCAGCGC GCGCGGGTTCAAGGTCGAGGTGTTCAACGTGCTGGGCGCGGGCGACGCCTTCATGGCCGGTTTCCTGCGGGGCTGGCTGC GGCATGAGAGCGTCGAGACCTGTTGCGAGTGGGGCAACGCCTGTGGCGCTATCGTGGTCTCGCGCCACGGCTGTACGCCG GCCATGCCGACCTGGATCGAGCTGCAGGCCTTCCTCTCCGAGCGGGAGCGTCCCTTCCGTCTGCGCGAGGACGCCGAGCT TGAGCACATCCACTGGGCCACGACCCGCGAGCGCGTCTATGACGAGCTGACCGTCCTGGCGATCGATCATCGCAGTCAGT TCGAGGATCTGATCGCCGAGACCGGCGGCGACGCAGAGCGCATTCCAGACTTCAAGCGCCTTGCCTTGCGCGCCGTCCAG ATGGTTGCAGGGCGAGATGAAACGCGGTTTGGCATGCTGCTGGACGGCCGCTTCGGGTTCGAGGCGTTGGCCGAGGCCGC CGACCACGACTACTGGATCGCGCGCCCCATCGAGTTGCCCAAGTCGAGGCCCCTGGAGTTCGAGTGCTCCGCCGACGTGG CGACCGAGCTTTTGGAATGGCCTTTGAACCAGGTGGTCAAGTGCCTGGCCTTCTATCACCCTGACGACGAGAGCGACCTG CGCGAGCGCCAGGAGCGGCAACTGCTGCGCTTGGCCGACGCCTGCCGCAAGACCCGTCATGAACTGTTGCTTGAGCTGAT CCTGCCGCGCGGCATGTCCAGCGACAGCAGGACTGTGGCGCGTGCGATCCGCCGGCTCTACGCCCTGGGCATTCGTCCAG ACTGGTGGAAGCTGGAGCCGCTGACCGATCCCGACGCTTGGCGCGAGATCGAGATCGCCATAGCCGAGAATGATCCGCTT TGCCGGGGCGTGGTCCTGCTGGGGCTGTCGGCGCCCGAGGCCGAGCTGGTGGCCTCGTTCGAGGTGGTCGCGCCGTTCCC GATCGTGAAGGGCTTCGCGGTCGGCCGGACGATTTTCTACGATGTCGCCCGCGCCTGGCTGTCCAACCAGATCGACGATG ACGCGGCCGTGACGGCGCTGGCCGCGAAGTTCAAGGTGCTGGTCGACGCCTGGCGTCGCCTCCGAGGCTCCGTGGAAAAG GCCGCTTAG
Upstream 100 bases:
>100_bases CTGCTGGAAAATGAAATGCATATTGCAAGCATTTCAGGCCTGGAATATGCGTTACATTATCGCCGGTGGGGAGCCGGTCG CAGAGTGACGTGGAACCGGA
Downstream 100 bases:
>100_bases AATGGCTCTGGTTCGTCTCACCGCCGCCCAGGCGACCGTACGCTGGCTCGCGGCGCAGCACGTCGAGACGTCGGACGGCG AGGTTCCGTACTTCGCCGGC
Product: iolC protein
Products: NA
Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase; DKG kinase [H]
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MAQDAKTLDLIAVGRSSVDLYGQQVGGRLEDMGSFAKYLGGSPTNTAAGGARLGLKTGLLTRVGADHMGRFIREQLEREG VDVAGVLSDPDRLTALVILGIRDRVNFPLIFYRENCADMALEPSDVDEAWFAQAGAVLINGTHLSQPNVYETSLKAARAV KAAGGRVAFDIDYRPVLWGLTGKDAGENRFVENQQVTAKLQEVVALCDLIVGTEEEIHILGGSTDTIAALRAIRRASDAL LVCKRGPEGCVAFPGAIPDALDEGVSARGFKVEVFNVLGAGDAFMAGFLRGWLRHESVETCCEWGNACGAIVVSRHGCTP AMPTWIELQAFLSERERPFRLREDAELEHIHWATTRERVYDELTVLAIDHRSQFEDLIAETGGDAERIPDFKRLALRAVQ MVAGRDETRFGMLLDGRFGFEALAEAADHDYWIARPIELPKSRPLEFECSADVATELLEWPLNQVVKCLAFYHPDDESDL RERQERQLLRLADACRKTRHELLLELILPRGMSSDSRTVARAIRRLYALGIRPDWWKLEPLTDPDAWREIEIAIAENDPL CRGVVLLGLSAPEAELVASFEVVAPFPIVKGFAVGRTIFYDVARAWLSNQIDDDAAVTALAAKFKVLVDAWRRLRGSVEK AA
Sequences:
>Translated_642_residues MAQDAKTLDLIAVGRSSVDLYGQQVGGRLEDMGSFAKYLGGSPTNTAAGGARLGLKTGLLTRVGADHMGRFIREQLEREG VDVAGVLSDPDRLTALVILGIRDRVNFPLIFYRENCADMALEPSDVDEAWFAQAGAVLINGTHLSQPNVYETSLKAARAV KAAGGRVAFDIDYRPVLWGLTGKDAGENRFVENQQVTAKLQEVVALCDLIVGTEEEIHILGGSTDTIAALRAIRRASDAL LVCKRGPEGCVAFPGAIPDALDEGVSARGFKVEVFNVLGAGDAFMAGFLRGWLRHESVETCCEWGNACGAIVVSRHGCTP AMPTWIELQAFLSERERPFRLREDAELEHIHWATTRERVYDELTVLAIDHRSQFEDLIAETGGDAERIPDFKRLALRAVQ MVAGRDETRFGMLLDGRFGFEALAEAADHDYWIARPIELPKSRPLEFECSADVATELLEWPLNQVVKCLAFYHPDDESDL RERQERQLLRLADACRKTRHELLLELILPRGMSSDSRTVARAIRRLYALGIRPDWWKLEPLTDPDAWREIEIAIAENDPL CRGVVLLGLSAPEAELVASFEVVAPFPIVKGFAVGRTIFYDVARAWLSNQIDDDAAVTALAAKFKVLVDAWRRLRGSVEK AA >Mature_641_residues AQDAKTLDLIAVGRSSVDLYGQQVGGRLEDMGSFAKYLGGSPTNTAAGGARLGLKTGLLTRVGADHMGRFIREQLEREGV DVAGVLSDPDRLTALVILGIRDRVNFPLIFYRENCADMALEPSDVDEAWFAQAGAVLINGTHLSQPNVYETSLKAARAVK AAGGRVAFDIDYRPVLWGLTGKDAGENRFVENQQVTAKLQEVVALCDLIVGTEEEIHILGGSTDTIAALRAIRRASDALL VCKRGPEGCVAFPGAIPDALDEGVSARGFKVEVFNVLGAGDAFMAGFLRGWLRHESVETCCEWGNACGAIVVSRHGCTPA MPTWIELQAFLSERERPFRLREDAELEHIHWATTRERVYDELTVLAIDHRSQFEDLIAETGGDAERIPDFKRLALRAVQM VAGRDETRFGMLLDGRFGFEALAEAADHDYWIARPIELPKSRPLEFECSADVATELLEWPLNQVVKCLAFYHPDDESDLR ERQERQLLRLADACRKTRHELLLELILPRGMSSDSRTVARAIRRLYALGIRPDWWKLEPLTDPDAWREIEIAIAENDPLC RGVVLLGLSAPEAELVASFEVVAPFPIVKGFAVGRTIFYDVARAWLSNQIDDDAAVTALAAKFKVLVDAWRRLRGSVEKA A
Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR022841 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.92 [H]
Molecular weight: Translated: 70890; Mature: 70758
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDAKTLDLIAVGRSSVDLYGQQVGGRLEDMGSFAKYLGGSPTNTAAGGARLGLKTGLL CCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TRVGADHMGRFIREQLEREGVDVAGVLSDPDRLTALVILGIRDRVNFPLIFYRENCADMA HHHCHHHHHHHHHHHHHHCCCCEEEECCCCHHEEEEEEEECCCCCCCCEEEEECCCHHCC LEPSDVDEAWFAQAGAVLINGTHLSQPNVYETSLKAARAVKAAGGRVAFDIDYRPVLWGL CCCCCCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEC TGKDAGENRFVENQQVTAKLQEVVALCDLIVGTEEEIHILGGSTDTIAALRAIRRASDAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEE LVCKRGPEGCVAFPGAIPDALDEGVSARGFKVEVFNVLGAGDAFMAGFLRGWLRHESVET EEEECCCCCCEECCCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH CCEWGNACGAIVVSRHGCTPAMPTWIELQAFLSERERPFRLREDAELEHIHWATTRERVY HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHH DELTVLAIDHRSQFEDLIAETGGDAERIPDFKRLALRAVQMVAGRDETRFGMLLDGRFGF HCEEEEEECCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH EALAEAADHDYWIARPIELPKSRPLEFECSADVATELLEWPLNQVVKCLAFYHPDDESDL HHHHHHCCCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RERQERQLLRLADACRKTRHELLLELILPRGMSSDSRTVARAIRRLYALGIRPDWWKLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECC LTDPDAWREIEIAIAENDPLCRGVVLLGLSAPEAELVASFEVVAPFPIVKGFAVGRTIFY CCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHEEHHHCCCHHHHHHHHHHHHHH DVARAWLSNQIDDDAAVTALAAKFKVLVDAWRRLRGSVEKAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCC >Mature Secondary Structure AQDAKTLDLIAVGRSSVDLYGQQVGGRLEDMGSFAKYLGGSPTNTAAGGARLGLKTGLL CCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TRVGADHMGRFIREQLEREGVDVAGVLSDPDRLTALVILGIRDRVNFPLIFYRENCADMA HHHCHHHHHHHHHHHHHHCCCCEEEECCCCHHEEEEEEEECCCCCCCCEEEEECCCHHCC LEPSDVDEAWFAQAGAVLINGTHLSQPNVYETSLKAARAVKAAGGRVAFDIDYRPVLWGL CCCCCCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEC TGKDAGENRFVENQQVTAKLQEVVALCDLIVGTEEEIHILGGSTDTIAALRAIRRASDAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEE LVCKRGPEGCVAFPGAIPDALDEGVSARGFKVEVFNVLGAGDAFMAGFLRGWLRHESVET EEEECCCCCCEECCCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH CCEWGNACGAIVVSRHGCTPAMPTWIELQAFLSERERPFRLREDAELEHIHWATTRERVY HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHH DELTVLAIDHRSQFEDLIAETGGDAERIPDFKRLALRAVQMVAGRDETRFGMLLDGRFGF HCEEEEEECCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH EALAEAADHDYWIARPIELPKSRPLEFECSADVATELLEWPLNQVVKCLAFYHPDDESDL HHHHHHCCCCEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RERQERQLLRLADACRKTRHELLLELILPRGMSSDSRTVARAIRRLYALGIRPDWWKLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECC LTDPDAWREIEIAIAENDPLCRGVVLLGLSAPEAELVASFEVVAPFPIVKGFAVGRTIFY CCCCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHEEHHHCCCHHHHHHHHHHHHHH DVARAWLSNQIDDDAAVTALAAKFKVLVDAWRRLRGSVEKAA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]