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The map label for this gene is nudL [H]

Identifier: 16124662

GI number: 16124662

Start: 425636

End: 426286

Strand: Direct

Name: nudL [H]

Synonym: CC_0407

Alternate gene names: 16124662

Gene position: 425636-426286 (Clockwise)

Preceding gene: 16124661

Following gene: 16124663

Centisome position: 10.6

GC content: 69.59

Gene sequence:

>651_bases
ATGACTCGCGAAGAGCGCCGCGCCTGGATCACCAGCCGCCTGCATCCGATCGCGGGTTATGATCCGAGCCTGGCCAACCC
GCTGCGTTCGGACTTCGATCTCAATCCGGGCCTGAAGGTCGACAATCCCCACGCCCTGCGTCCCGCCGCCGTGCTGGTGG
GACTGGTCGAGCACGACGACGGCCCGACCATTCTGCTGACCCGCCGGGCGGACACCCTGCGCAGCCACACCGGCCAGATC
GCCTTCCCGGGCGGCCGCTGCGATCCGGGCGAGACGCCCTGGGGCACGGCCCTGCGCGAGGCGCAGGAGGAGGTCGGGCT
GGACCCGGCCCTCGTCACGGTGGCGGGACTGCTGCACGGCTACCAGACCGTGACCGGCTTCCACGTGACCCCGGTCGTGG
GCTTCATCGATCCCAAGGCGACCTTCACGCCCAGCCCCGAGGAGGTCGCCGACGTCTTCGAGACGCCGTTCGATTTCCTG
ATGGATCCGGCCAACCACCAGCGCCAGCACCGCGAGGTTCCGGGCGGGCCGCGCCGCCATTTCTACGCCATGCCGTGGAA
TGATCGGTTCATCTGGGGCGCGACGGCGGGCATGTTGCGGTCGCTCTACGAGGCCCTCCACGACGAAACCGGACTGGCCC
CCTCCGAATAG

Upstream 100 bases:

>100_bases
TCTATGAGCTGGCCGAGACGGCGGTGGAAGAGGACGGTGTCTGGGGCGTGCGCTCGGGCGGGGCCTTCTTCCCGATCGCC
GCGCCCGGCAAGGGTCTGGC

Downstream 100 bases:

>100_bases
GGCGTTTCTTGTCTGGCGAAGCCGGGGTCTAGTGGCCTAACAATGTCGCCCCTTCGTTGGAGGGGATCGGACGCGTGAGT
GGGAGTCAGGCGTTGAGCAG

Product: MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTREERRAWITSRLHPIAGYDPSLANPLRSDFDLNPGLKVDNPHALRPAAVLVGLVEHDDGPTILLTRRADTLRSHTGQI
AFPGGRCDPGETPWGTALREAQEEVGLDPALVTVAGLLHGYQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFL
MDPANHQRQHREVPGGPRRHFYAMPWNDRFIWGATAGMLRSLYEALHDETGLAPSE

Sequences:

>Translated_216_residues
MTREERRAWITSRLHPIAGYDPSLANPLRSDFDLNPGLKVDNPHALRPAAVLVGLVEHDDGPTILLTRRADTLRSHTGQI
AFPGGRCDPGETPWGTALREAQEEVGLDPALVTVAGLLHGYQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFL
MDPANHQRQHREVPGGPRRHFYAMPWNDRFIWGATAGMLRSLYEALHDETGLAPSE
>Mature_215_residues
TREERRAWITSRLHPIAGYDPSLANPLRSDFDLNPGLKVDNPHALRPAAVLVGLVEHDDGPTILLTRRADTLRSHTGQIA
FPGGRCDPGETPWGTALREAQEEVGLDPALVTVAGLLHGYQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFLM
DPANHQRQHREVPGGPRRHFYAMPWNDRFIWGATAGMLRSLYEALHDETGLAPSE

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=122, Percent_Identity=40.1639344262295, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1788115, Length=159, Percent_Identity=41.5094339622642, Blast_Score=82, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17536993, Length=119, Percent_Identity=42.0168067226891, Blast_Score=87, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23860; Mature: 23729

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00893 NUDIX ; PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREERRAWITSRLHPIAGYDPSLANPLRSDFDLNPGLKVDNPHALRPAAVLVGLVEHDD
CCHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHEEHEECCC
GPTILLTRRADTLRSHTGQIAFPGGRCDPGETPWGTALREAQEEVGLDPALVTVAGLLHG
CCEEEEEECHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
YQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFLMDPANHQRQHREVPGGPRRH
HHHHCCEEHHHEEEEECCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCC
FYAMPWNDRFIWGATAGMLRSLYEALHDETGLAPSE
EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TREERRAWITSRLHPIAGYDPSLANPLRSDFDLNPGLKVDNPHALRPAAVLVGLVEHDD
CHHHHHHHHHHHCCCCCCCCCHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHEEHEECCC
GPTILLTRRADTLRSHTGQIAFPGGRCDPGETPWGTALREAQEEVGLDPALVTVAGLLHG
CCEEEEEECHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
YQTVTGFHVTPVVGFIDPKATFTPSPEEVADVFETPFDFLMDPANHQRQHREVPGGPRRH
HHHHCCEEHHHEEEEECCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCC
FYAMPWNDRFIWGATAGMLRSLYEALHDETGLAPSE
EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA