| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is bglA [H]
Identifier: 16124635
GI number: 16124635
Start: 400574
End: 401479
Strand: Direct
Name: bglA [H]
Synonym: CC_0380
Alternate gene names: 16124635
Gene position: 400574-401479 (Clockwise)
Preceding gene: 16124632
Following gene: 16124636
Centisome position: 9.97
GC content: 69.21
Gene sequence:
>906_bases ATGTCACGCCCTCTCGCCGTCCTTGCCGTATGCTCGGCCCTACTGGCCGCCGGACCCGTCCATGCCCGGGACGATTGGAA GCTGGTCTGGTCCGACGAGTTCAATGGGACCGCGCTGGACGAGACCAAATGGACGCCCGCAATCGACTGCGGCGGCGGTG GCAATGACGAGCGGCAATGCTACGCCGACAGTCCCGAGACCCTGTCGGTCCAGGACGGCGCGCTGCGCCTGACAGCGATC AAGCGCAAGACGTGGGGGGTAGTCAATCCCTGGGCCGGACCGACGGGGCCGCTGAAGGCCGGCGACTACGCCTCGGGCAA GATCGTCACCCAGGGCAAGTTCAGCTGGCGCTATGGCCGCGTCGAAGCCCGCGCGCGTGTTCCGGGCGGGCAGGGCGCCT GGCCGGCGATCTGGATGATGCCGGAGCTGTCGACCTATGGCGGTTGGCCAAGGTCCGGCGAGATCGACATCCTGGAGACG GTGAATCTCGGCGCGCCTTGCCCGCCGGTGGGCGAGGCGTGCGCGGACGGACGCGAGAACCGCGTGTTCGGCACGATCCA CTTCGCGGGCGACGCGACCGGCGCCCACAAGCAGGTCAGCGCCAGCACGCCCTTGCCGGCCTCGCCCGACGGCTTCCATG TCTATGCGGTCGAATGGTCGCCCGAGGCGATCGTCTGGTTCCTGGATGGCCGGGAGTACGCCCGCGCCAAGCCGCAAGAC TGGAAGCGGGACGACCAGCCGGCCAGCGCCGCGCCGTTCGACCAGCCCTTCCACCTGATCATCAACCTCGCCTTCGGTGG CCGCTGGCCCGAGAGCGTCAACGCCAAGGGGATCGACGAGGCCGCGCTGCCGGCGACGATGGAGGTGGACTGGGTGCGGG TCAGCCAACTGGCGTCGCAAGACTAG
Upstream 100 bases:
>100_bases GGTCCGGGCGGCATGGCGGCTGTTTAGGCCGGTTCGGCGCCAATGGGAATCAGCAAGGGCGCGGCTGGAGCGGTCCGGCT GATGCCGTTAGGGTTCTCCT
Downstream 100 bases:
>100_bases CGCTCGTTGCCTCCGGCGCCGCCGACTGGCAGGGTCCGGGCCTCGCCGTGGAGACGCGCTTCGTGACCCCGTTCCATCAC CTGCTGGTCAACAATCTGGT
Product: beta-glucanase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSRPLAVLAVCSALLAAGPVHARDDWKLVWSDEFNGTALDETKWTPAIDCGGGGNDERQCYADSPETLSVQDGALRLTAI KRKTWGVVNPWAGPTGPLKAGDYASGKIVTQGKFSWRYGRVEARARVPGGQGAWPAIWMMPELSTYGGWPRSGEIDILET VNLGAPCPPVGEACADGRENRVFGTIHFAGDATGAHKQVSASTPLPASPDGFHVYAVEWSPEAIVWFLDGREYARAKPQD WKRDDQPASAAPFDQPFHLIINLAFGGRWPESVNAKGIDEAALPATMEVDWVRVSQLASQD
Sequences:
>Translated_301_residues MSRPLAVLAVCSALLAAGPVHARDDWKLVWSDEFNGTALDETKWTPAIDCGGGGNDERQCYADSPETLSVQDGALRLTAI KRKTWGVVNPWAGPTGPLKAGDYASGKIVTQGKFSWRYGRVEARARVPGGQGAWPAIWMMPELSTYGGWPRSGEIDILET VNLGAPCPPVGEACADGRENRVFGTIHFAGDATGAHKQVSASTPLPASPDGFHVYAVEWSPEAIVWFLDGREYARAKPQD WKRDDQPASAAPFDQPFHLIINLAFGGRWPESVNAKGIDEAALPATMEVDWVRVSQLASQD >Mature_300_residues SRPLAVLAVCSALLAAGPVHARDDWKLVWSDEFNGTALDETKWTPAIDCGGGGNDERQCYADSPETLSVQDGALRLTAIK RKTWGVVNPWAGPTGPLKAGDYASGKIVTQGKFSWRYGRVEARARVPGGQGAWPAIWMMPELSTYGGWPRSGEIDILETV NLGAPCPPVGEACADGRENRVFGTIHFAGDATGAHKQVSASTPLPASPDGFHVYAVEWSPEAIVWFLDGREYARAKPQDW KRDDQPASAAPFDQPFHLIINLAFGGRWPESVNAKGIDEAALPATMEVDWVRVSQLASQD
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
Organism=Drosophila melanogaster, GI24661232, Length=311, Percent_Identity=27.3311897106109, Blast_Score=85, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 32527; Mature: 32395
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPLAVLAVCSALLAAGPVHARDDWKLVWSDEFNGTALDETKWTPAIDCGGGGNDERQC CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEE YADSPETLSVQDGALRLTAIKRKTWGVVNPWAGPTGPLKAGDYASGKIVTQGKFSWRYGR ECCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECE VEARARVPGGQGAWPAIWMMPELSTYGGWPRSGEIDILETVNLGAPCPPVGEACADGREN EEEEEECCCCCCCCCEEEECCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCC RVFGTIHFAGDATGAHKQVSASTPLPASPDGFHVYAVEWSPEAIVWFLDGREYARAKPQD CEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCHHHCCCCCC WKRDDQPASAAPFDQPFHLIINLAFGGRWPESVNAKGIDEAALPATMEVDWVRVSQLASQ CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEHHHHHHHHHCC D C >Mature Secondary Structure SRPLAVLAVCSALLAAGPVHARDDWKLVWSDEFNGTALDETKWTPAIDCGGGGNDERQC CCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEE YADSPETLSVQDGALRLTAIKRKTWGVVNPWAGPTGPLKAGDYASGKIVTQGKFSWRYGR ECCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECE VEARARVPGGQGAWPAIWMMPELSTYGGWPRSGEIDILETVNLGAPCPPVGEACADGREN EEEEEECCCCCCCCCEEEECCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCC RVFGTIHFAGDATGAHKQVSASTPLPASPDGFHVYAVEWSPEAIVWFLDGREYARAKPQD CEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCHHHCCCCCC WKRDDQPASAAPFDQPFHLIINLAFGGRWPESVNAKGIDEAALPATMEVDWVRVSQLASQ CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]