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The map label for this gene is 13488318

Identifier: 13488318

GI number: 13488318

Start: 347347

End: 347976

Strand: Direct

Name: 13488318

Synonym: mlr9389

Alternate gene names: NA

Gene position: 347347-347976 (Clockwise)

Preceding gene: 13488317

Following gene: 161621456

Centisome position: 98.7

GC content: 60.0

Gene sequence:

>630_bases
ATGTTTTGGGTAGAATTGGGTATGTCCCGCAGGTACACAATGCACTCTCCTTCTACTCTTCGGCCCATCCTGATCGTGAC
GGATCTCGCCGCCATCTCCGACGAGCAGCCTCAGTCCGTGACACTCTATTGCCCTTCCTGCGAAGGACTGCAGGGCAGCG
CCTATGACAGCCTCGTGCTCCTTCCGATTCACGACACAAACGGGCGTCTTCTGGCCGAGCTCCGGAAGGGAATTCCACGC
CGGAGACAGACGTTTGCGGGTGTTCTTGCCCTCGATCCATTTCGCCGCCATGTCGACATTCTGAAGGCTCTTGGGACGGC
CAGTTGCCCCGGTGTCGTCAACTTCCCGAGCGTGACCGCAATCGACGGCGAAATGCGCGTCAGCCTCGAGGACTACGGAT
ACGGGGTGACGACCGAAATCAATCTGCTGCGAATGGCGGTCGCAAAGGGGTTCGGTGCGCTCGCTGTGGTCGACAGTTTT
GGGATGGCGCAAGAAGCCGTCACCATCGGCGTGAGCGGACTGATCGCAGTACGGCACACGAGCGACGCCATGCTTGCCGA
GCTCTCCGAGCTTGCTCATGAGACGACACTGGGGCTGTTTCGACTTCCTGACGCCGTTGGCGGGCCTTGA

Upstream 100 bases:

>100_bases
CAATTTTCATTGTTGTCCTCCCGGCCATTCCTCAGTCAGCCGCCCTGACCTCACAAAATCCTAGTCGCCTCGCCGGCAGC
AAATCAATTGGCGCATACCG

Downstream 100 bases:

>100_bases
ATACGTGTTCAGCTTGGGGGTCGGCATGCCCCATTGGACAAGTCCGAACGAATTCCGCATCATGTGACGAAACTCTACGA
TATATAAGAAACTCTACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MFWVELGMSRRYTMHSPSTLRPILIVTDLAAISDEQPQSVTLYCPSCEGLQGSAYDSLVLLPIHDTNGRLLAELRKGIPR
RRQTFAGVLALDPFRRHVDILKALGTASCPGVVNFPSVTAIDGEMRVSLEDYGYGVTTEINLLRMAVAKGFGALAVVDSF
GMAQEAVTIGVSGLIAVRHTSDAMLAELSELAHETTLGLFRLPDAVGGP

Sequences:

>Translated_209_residues
MFWVELGMSRRYTMHSPSTLRPILIVTDLAAISDEQPQSVTLYCPSCEGLQGSAYDSLVLLPIHDTNGRLLAELRKGIPR
RRQTFAGVLALDPFRRHVDILKALGTASCPGVVNFPSVTAIDGEMRVSLEDYGYGVTTEINLLRMAVAKGFGALAVVDSF
GMAQEAVTIGVSGLIAVRHTSDAMLAELSELAHETTLGLFRLPDAVGGP
>Mature_209_residues
MFWVELGMSRRYTMHSPSTLRPILIVTDLAAISDEQPQSVTLYCPSCEGLQGSAYDSLVLLPIHDTNGRLLAELRKGIPR
RRQTFAGVLALDPFRRHVDILKALGTASCPGVVNFPSVTAIDGEMRVSLEDYGYGVTTEINLLRMAVAKGFGALAVVDSF
GMAQEAVTIGVSGLIAVRHTSDAMLAELSELAHETTLGLFRLPDAVGGP

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 22471; Mature: 22471

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWVELGMSRRYTMHSPSTLRPILIVTDLAAISDEQPQSVTLYCPSCEGLQGSAYDSLVL
CEEEEECCCCEEEECCCCCCCCEEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEE
LPIHDTNGRLLAELRKGIPRRRQTFAGVLALDPFRRHVDILKALGTASCPGVVNFPSVTA
EEEECCCCHHHHHHHHCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCCEECCCEEE
IDGEMRVSLEDYGYGVTTEINLLRMAVAKGFGALAVVDSFGMAQEAVTIGVSGLIAVRHT
ECCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHEECCEEEEEEEEC
SDAMLAELSELAHETTLGLFRLPDAVGGP
CHHHHHHHHHHHHHHHHHHEECCCCCCCC
>Mature Secondary Structure
MFWVELGMSRRYTMHSPSTLRPILIVTDLAAISDEQPQSVTLYCPSCEGLQGSAYDSLVL
CEEEEECCCCEEEECCCCCCCCEEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEE
LPIHDTNGRLLAELRKGIPRRRQTFAGVLALDPFRRHVDILKALGTASCPGVVNFPSVTA
EEEECCCCHHHHHHHHCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCCEECCCEEE
IDGEMRVSLEDYGYGVTTEINLLRMAVAKGFGALAVVDSFGMAQEAVTIGVSGLIAVRHT
ECCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHEECCEEEEEEEEC
SDAMLAELSELAHETTLGLFRLPDAVGGP
CHHHHHHHHHHHHHHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]