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The map label for this gene is potC [H]

Identifier: 13488317

GI number: 13488317

Start: 340266

End: 341096

Strand: Direct

Name: potC [H]

Synonym: mlr9382

Alternate gene names: 13488317

Gene position: 340266-341096 (Clockwise)

Preceding gene: 13488316

Following gene: 13488318

Centisome position: 96.69

GC content: 56.08

Gene sequence:

>831_bases
ATGAGACGGTCGTTCGATGCAGAGGGATGGCGCGAGCGATTCCTGATCCTCTGGACGATCATGACAATTCTTTTCCTTTT
GCTGCCGCTGTCCGTGATTGTCATTATGTCGTTTTCTGCAGGGCAGTTTCTCACTATACCCAAGGAACTGTCACTTCGAT
GGTACCAAGAAGTGCTTACGAACGGGCAGTGGCGCCAAGCCGCTCTGAATTCTTTTTCAATAGCATTGCTCGCGGTTTCT
ATTGCACTTCCAGCCGGCCTCGGACTGGCGCTCGCGAACCATTACGCTCCACCTAGGTGGCGGGCATTCGTGAGGTCGGC
GGCCGCAGGCCCTATGATTGTCCCTGTCATCGTACTTGCTATCGCCCTTTTCTTCGTGCTGGCCAAACTCGGCGTTGTGG
GGACGCGATTTGGTGTGGCGATTGGGCACGGCCTGCTCGTCATGCCATTTGTCTTCGTTTCCGTGTCCACCGCGCTCGAG
TATTTCGATGATCAGCTTATCGAAGCTGCGGAGTCGCTTGGCGCGTCACGTTCTTACGCGTGGCGGACCGTCTTGCTTCC
CTTTGTTGTCCCTGCAATCGTGGTGGGCGCGGCGCTGGCGTTCGTGAACTCGTTCGACGAAGCTGTCATTGCCATTTTTG
TCGGACAAGGCGGAACACTCACTATTCCGAGCTTGATGTGGCGTTCCATCAATCTCGAGATTACGCCCAGCATCGCCGCG
GTCGCCTCTATGGTAACTGGGATTGGTATCCTGATCCAGGGTGCCGCGTTCTTGTGGCTTTGGCGCCGCTTGAGGGTAAG
CGTGAAGCTTAGCCCGTCTGGCGCGACATAA

Upstream 100 bases:

>100_bases
AGGACACTTGACAATGTCACTCAGCACATCTCCGAAATTATCCTACCAACATGAATCGGCCGACGGTTCGGAAGCTCTGC
CAAACGCACGGAGAAAACCA

Downstream 100 bases:

>100_bases
GATGATGGGCTACGACCAGCAGCAACTGCATCTCGATTTTTTCGAGAAGCCTTGCGGCACGTCATGAAGCAGGGGCGTCG
CCTTCCATTCATCAGCATCG

Product: permease of ABC transporter

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRRSFDAEGWRERFLILWTIMTILFLLLPLSVIVIMSFSAGQFLTIPKELSLRWYQEVLTNGQWRQAALNSFSIALLAVS
IALPAGLGLALANHYAPPRWRAFVRSAAAGPMIVPVIVLAIALFFVLAKLGVVGTRFGVAIGHGLLVMPFVFVSVSTALE
YFDDQLIEAAESLGASRSYAWRTVLLPFVVPAIVVGAALAFVNSFDEAVIAIFVGQGGTLTIPSLMWRSINLEITPSIAA
VASMVTGIGILIQGAAFLWLWRRLRVSVKLSPSGAT

Sequences:

>Translated_276_residues
MRRSFDAEGWRERFLILWTIMTILFLLLPLSVIVIMSFSAGQFLTIPKELSLRWYQEVLTNGQWRQAALNSFSIALLAVS
IALPAGLGLALANHYAPPRWRAFVRSAAAGPMIVPVIVLAIALFFVLAKLGVVGTRFGVAIGHGLLVMPFVFVSVSTALE
YFDDQLIEAAESLGASRSYAWRTVLLPFVVPAIVVGAALAFVNSFDEAVIAIFVGQGGTLTIPSLMWRSINLEITPSIAA
VASMVTGIGILIQGAAFLWLWRRLRVSVKLSPSGAT
>Mature_276_residues
MRRSFDAEGWRERFLILWTIMTILFLLLPLSVIVIMSFSAGQFLTIPKELSLRWYQEVLTNGQWRQAALNSFSIALLAVS
IALPAGLGLALANHYAPPRWRAFVRSAAAGPMIVPVIVLAIALFFVLAKLGVVGTRFGVAIGHGLLVMPFVFVSVSTALE
YFDDQLIEAAESLGASRSYAWRTVLLPFVVPAIVVGAALAFVNSFDEAVIAIFVGQGGTLTIPSLMWRSINLEITPSIAA
VASMVTGIGILIQGAAFLWLWRRLRVSVKLSPSGAT

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=211, Percent_Identity=28.436018957346, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787081, Length=250, Percent_Identity=28, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29932; Mature: 29932

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSFDAEGWRERFLILWTIMTILFLLLPLSVIVIMSFSAGQFLTIPKELSLRWYQEVLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHC
NGQWRQAALNSFSIALLAVSIALPAGLGLALANHYAPPRWRAFVRSAAAGPMIVPVIVLA
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
IALFFVLAKLGVVGTRFGVAIGHGLLVMPFVFVSVSTALEYFDDQLIEAAESLGASRSYA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WRTVLLPFVVPAIVVGAALAFVNSFDEAVIAIFVGQGGTLTIPSLMWRSINLEITPSIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEHHHHHHHHCCEEECCHHHH
VASMVTGIGILIQGAAFLWLWRRLRVSVKLSPSGAT
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure
MRRSFDAEGWRERFLILWTIMTILFLLLPLSVIVIMSFSAGQFLTIPKELSLRWYQEVLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHC
NGQWRQAALNSFSIALLAVSIALPAGLGLALANHYAPPRWRAFVRSAAAGPMIVPVIVLA
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
IALFFVLAKLGVVGTRFGVAIGHGLLVMPFVFVSVSTALEYFDDQLIEAAESLGASRSYA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
WRTVLLPFVVPAIVVGAALAFVNSFDEAVIAIFVGQGGTLTIPSLMWRSINLEITPSIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEHHHHHHHHCCEEECCHHHH
VASMVTGIGILIQGAAFLWLWRRLRVSVKLSPSGAT
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]