| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is phnJ [H]
Identifier: 13488285
GI number: 13488285
Start: 255868
End: 256761
Strand: Direct
Name: phnJ [H]
Synonym: mlr9282
Alternate gene names: 13488285
Gene position: 255868-256761 (Clockwise)
Preceding gene: 13488284
Following gene: 13488286
Centisome position: 72.71
GC content: 60.63
Gene sequence:
>894_bases ATGAGCATTGGCACGACGACGAACCACAGCGATACAGGCTACAACTTCGCCTATCTCGATGAGCAGACGAAGCGGATGAT CCGCCGCTCGCTATTGAAGGCCCTGTCCATTCCGGGCTACCAGGTGCCCTTCGGCGGTCGCGAAATGCCGCTCGCCTATG GCTGGGGCACCGGTGGCATCCAGGTGACGGCGGCCGTCATCGGACCTAACGATCGTCTGAAGGTGATCGACCAGGGCGCC GACGACACAACCAATGCGGTTTCCATCCGCCGTTTTTTTCAGACAGTGGCCGACGTCGCCGTCACCGAATCCACCGAAGA CGCAACCATCGTCCAGACGCGCCACCGCGTCCCGGAGGCGCCACTCAAGGAAGGCCAGGTGCTGGTCTATCAAGTGCCGC AGCCGGAGCCACTAAGGAAGATCGATCCGCGCGAGACTGAGACCCGCAAGATGCATGCCTATGCCGAATATGGTGCCATG CAGGTGACGCTCTATGAGGACATCTCCCGTTTCGGTCGCATAGCCAAAACCTACGACTATCCGGCCATCATCAACGGCAG GCATCTGATGTCGCCTTCGCCGATTCCGAAGTTCGACAATCCGAAGATGGAAAACAATCCGGCCATCCAGCTGTTCGGCG CCGGCCGGGAAAAACGCATCTATGCTGTGCCGCCCTACACGTCCGTCCGCAGCCTCGACTTCGACGACCACCCCTTCGAG GTGCAGAGCTGGAAGGGATGCTGCGCCCTCTGCGGCTCGACGGTGAGTTACCTCGACGAGGTGATTACCGATGACAAGGG TTCGCGCATGTTCGTCTGCTCCGACACCGATTTCTGCAACACCCGTCAGAGAGAGGCCGCGGCGCAACCGAAGACCGCCG GAGGGCAGTCTTGA
Upstream 100 bases:
>100_bases CGCATTACGTCGATTTTCAGGCGGAACTGATGCTTGTCCGACAACTGCGGGCCGAGCACCAGGTCGCCCGCGGGGCAGGA CAGAAGAAGGAAGCCGCCGA
Downstream 100 bases:
>100_bases CCACAAATGCGATCCGCAGGCTCACTTCGAAGCCGCCGCTGCTTGAAGTCTCCGGGCTTTGCAAGTCCTATGGCGGCCAG ATCGGCTGCCGCGATGTGTC
Product: phosphonate metabolism protein PhnJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSIGTTTNHSDTGYNFAYLDEQTKRMIRRSLLKALSIPGYQVPFGGREMPLAYGWGTGGIQVTAAVIGPNDRLKVIDQGA DDTTNAVSIRRFFQTVADVAVTESTEDATIVQTRHRVPEAPLKEGQVLVYQVPQPEPLRKIDPRETETRKMHAYAEYGAM QVTLYEDISRFGRIAKTYDYPAIINGRHLMSPSPIPKFDNPKMENNPAIQLFGAGREKRIYAVPPYTSVRSLDFDDHPFE VQSWKGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQREAAAQPKTAGGQS
Sequences:
>Translated_297_residues MSIGTTTNHSDTGYNFAYLDEQTKRMIRRSLLKALSIPGYQVPFGGREMPLAYGWGTGGIQVTAAVIGPNDRLKVIDQGA DDTTNAVSIRRFFQTVADVAVTESTEDATIVQTRHRVPEAPLKEGQVLVYQVPQPEPLRKIDPRETETRKMHAYAEYGAM QVTLYEDISRFGRIAKTYDYPAIINGRHLMSPSPIPKFDNPKMENNPAIQLFGAGREKRIYAVPPYTSVRSLDFDDHPFE VQSWKGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQREAAAQPKTAGGQS >Mature_296_residues SIGTTTNHSDTGYNFAYLDEQTKRMIRRSLLKALSIPGYQVPFGGREMPLAYGWGTGGIQVTAAVIGPNDRLKVIDQGAD DTTNAVSIRRFFQTVADVAVTESTEDATIVQTRHRVPEAPLKEGQVLVYQVPQPEPLRKIDPRETETRKMHAYAEYGAMQ VTLYEDISRFGRIAKTYDYPAIINGRHLMSPSPIPKFDNPKMENNPAIQLFGAGREKRIYAVPPYTSVRSLDFDDHPFEV QSWKGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQREAAAQPKTAGGQS
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=278, Percent_Identity=73.3812949640288, Blast_Score=440, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 33059; Mature: 32927
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGTTTNHSDTGYNFAYLDEQTKRMIRRSLLKALSIPGYQVPFGGREMPLAYGWGTGGI CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCE QVTAAVIGPNDRLKVIDQGADDTTNAVSIRRFFQTVADVAVTESTEDATIVQTRHRVPEA EEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC PLKEGQVLVYQVPQPEPLRKIDPRETETRKMHAYAEYGAMQVTLYEDISRFGRIAKTYDY CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCC PAIINGRHLMSPSPIPKFDNPKMENNPAIQLFGAGREKRIYAVPPYTSVRSLDFDDHPFE CEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCE VQSWKGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQREAAAQPKTAGGQS ECCHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure SIGTTTNHSDTGYNFAYLDEQTKRMIRRSLLKALSIPGYQVPFGGREMPLAYGWGTGGI CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCE QVTAAVIGPNDRLKVIDQGADDTTNAVSIRRFFQTVADVAVTESTEDATIVQTRHRVPEA EEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC PLKEGQVLVYQVPQPEPLRKIDPRETETRKMHAYAEYGAMQVTLYEDISRFGRIAKTYDY CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCC PAIINGRHLMSPSPIPKFDNPKMENNPAIQLFGAGREKRIYAVPPYTSVRSLDFDDHPFE CEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCE VQSWKGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQREAAAQPKTAGGQS ECCHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]