| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488110
Identifier: 13488110
GI number: 13488110
Start: 154014
End: 155387
Strand: Reverse
Name: 13488110
Synonym: mll9172
Alternate gene names: NA
Gene position: 155387-154014 (Counterclockwise)
Preceding gene: 13488111
Following gene: 13488109
Centisome position: 44.16
GC content: 59.9
Gene sequence:
>1374_bases GTGCGTCCCAGCCGCGGCCCCGACGCCAGGGCAGCCGGGACCCGCCAAATGAGCCAGTTCGTCGCCACCACCACGCTCAG CCTCATGCGTTCCCTCGGGTCCACCGCAGAACGTTCGGTCCATAGGATGCAGGCGCTCCTCAGCCGGGAATTCCCCAACG GGATCGGGCTGGAACTGGCAGAGCCGGTGCCTCGCAAGGACGGAACGGGGATCGACTGGTATACGGAGCGCGAAGATCCG CTTGTCCGATTGACAGACCTCCCTGCCGAAACGGCCGATTTCTACAAAGCGCGTCTCCAACATTCCGTCCAAGCGGTCCT TCGTGCAGCCGCCGCGCACGATAGCCGCGGCGACACCACCGCAAGGTCCACGGCCACGGCGCTTCGCAACGCGGTGACGT TCCCGGGAGACGAGAACGTTTGGATCTCGGGCGGTTCAGGCAGGGGCGACGGAATGCTCGTCCTGACGGCATGGGGGTAC GAAAGGCACGACGCAGAGACGAGCGGCGGAGGAGAGATATCCGGGAAAACCGATAGAATACCGATAGCCGACAACATCAA GCCGCCTCCGGCCCGGCCAGGCGGCCGCTCCTGGAGGTGGCTGGCCGCCAGCCTTCTGTGGCTCATCCCCATAGCGCTCG CCGGAGCCACCGCCTGGCTGCTGTTGCCGGCATGCGGCGTGTCCCTCCCATTTGGCCTCACGGCTTTTGGAAAAGGAGGA GGCGCTTACTGCGCCCTTGTGGCGCCGCCGCCGACGGTTGACCAGGAAAGCCTGCACACACAGGAGCTGATGGCTGAAGC CGCAGTACTCGAAGAGCAGCTCCGGCGGCACCTGAACTCGTGCGTACGGACGCCGCCTCAGTCGGACGTGTCGAAAGACA TGGATAAGAAGCTGGACGACAGAAAAGGGCAAACCGGGAAGCTGCAAGTGACATTGACGTGGCACACGCGTGACGACCTT GATCTGATCGCTGAATGCCCTGGCGGAACTCTTGGCTGGAACGACAAGGGCCCCGGGATTTGCGGTGACGGCATAAAAGA CGTCGATTCAAACAGGTTTCGCAGAGAGAACGTAAGTTCTGAGCCAGTCGAGAACATATTTTGGCAGAAGGACATTCCGG CCGGGTCTTATGTATTTGAAGTGAATCCTACAAGCATCGATCTGGAAGGAAACCCTACTAAAGAGATCCCGTTTGAGATA CGTTTTAGGTACAACGATAAAGAAAAAGTCTGTCTTGGCAGCGCTTCGTCTGCCACAGGCGGGGACGGGAAGCAGAAATC AATAAAGTGGAATCTAGGGGACCCTCTGCCGGAGTGCAATTTTATGACCGCAGACGTTCACGCATGCAAGAAGAAATCAG AATGCAAGCAGTAG
Upstream 100 bases:
>100_bases ACGGAGAGAACGCACAGAAGCTGAACTTCTCCCTCAGCGCTCGCGACGCAATCCGCTTCCTGTCGTCAAACGGCGTGACG GTAACCACGACTGACAAGCC
Downstream 100 bases:
>100_bases TTGGTATCGATATGTTTGACATTCCACTTCGACATAAGACCTGGGACGTAACTCGCGGAACAGAGGGGGTGGCTGCGTGC TGACCAACCTCGCCGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MRPSRGPDARAAGTRQMSQFVATTTLSLMRSLGSTAERSVHRMQALLSREFPNGIGLELAEPVPRKDGTGIDWYTEREDP LVRLTDLPAETADFYKARLQHSVQAVLRAAAAHDSRGDTTARSTATALRNAVTFPGDENVWISGGSGRGDGMLVLTAWGY ERHDAETSGGGEISGKTDRIPIADNIKPPPARPGGRSWRWLAASLLWLIPIALAGATAWLLLPACGVSLPFGLTAFGKGG GAYCALVAPPPTVDQESLHTQELMAEAAVLEEQLRRHLNSCVRTPPQSDVSKDMDKKLDDRKGQTGKLQVTLTWHTRDDL DLIAECPGGTLGWNDKGPGICGDGIKDVDSNRFRRENVSSEPVENIFWQKDIPAGSYVFEVNPTSIDLEGNPTKEIPFEI RFRYNDKEKVCLGSASSATGGDGKQKSIKWNLGDPLPECNFMTADVHACKKKSECKQ
Sequences:
>Translated_457_residues MRPSRGPDARAAGTRQMSQFVATTTLSLMRSLGSTAERSVHRMQALLSREFPNGIGLELAEPVPRKDGTGIDWYTEREDP LVRLTDLPAETADFYKARLQHSVQAVLRAAAAHDSRGDTTARSTATALRNAVTFPGDENVWISGGSGRGDGMLVLTAWGY ERHDAETSGGGEISGKTDRIPIADNIKPPPARPGGRSWRWLAASLLWLIPIALAGATAWLLLPACGVSLPFGLTAFGKGG GAYCALVAPPPTVDQESLHTQELMAEAAVLEEQLRRHLNSCVRTPPQSDVSKDMDKKLDDRKGQTGKLQVTLTWHTRDDL DLIAECPGGTLGWNDKGPGICGDGIKDVDSNRFRRENVSSEPVENIFWQKDIPAGSYVFEVNPTSIDLEGNPTKEIPFEI RFRYNDKEKVCLGSASSATGGDGKQKSIKWNLGDPLPECNFMTADVHACKKKSECKQ >Mature_457_residues MRPSRGPDARAAGTRQMSQFVATTTLSLMRSLGSTAERSVHRMQALLSREFPNGIGLELAEPVPRKDGTGIDWYTEREDP LVRLTDLPAETADFYKARLQHSVQAVLRAAAAHDSRGDTTARSTATALRNAVTFPGDENVWISGGSGRGDGMLVLTAWGY ERHDAETSGGGEISGKTDRIPIADNIKPPPARPGGRSWRWLAASLLWLIPIALAGATAWLLLPACGVSLPFGLTAFGKGG GAYCALVAPPPTVDQESLHTQELMAEAAVLEEQLRRHLNSCVRTPPQSDVSKDMDKKLDDRKGQTGKLQVTLTWHTRDDL DLIAECPGGTLGWNDKGPGICGDGIKDVDSNRFRRENVSSEPVENIFWQKDIPAGSYVFEVNPTSIDLEGNPTKEIPFEI RFRYNDKEKVCLGSASSATGGDGKQKSIKWNLGDPLPECNFMTADVHACKKKSECKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49663; Mature: 49663
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSRGPDARAAGTRQMSQFVATTTLSLMRSLGSTAERSVHRMQALLSREFPNGIGLELA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC EPVPRKDGTGIDWYTEREDPLVRLTDLPAETADFYKARLQHSVQAVLRAAAAHDSRGDTT CCCCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ARSTATALRNAVTFPGDENVWISGGSGRGDGMLVLTAWGYERHDAETSGGGEISGKTDRI HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC PIADNIKPPPARPGGRSWRWLAASLLWLIPIALAGATAWLLLPACGVSLPFGLTAFGKGG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC GAYCALVAPPPTVDQESLHTQELMAEAAVLEEQLRRHLNSCVRTPPQSDVSKDMDKKLDD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RKGQTGKLQVTLTWHTRDDLDLIAECPGGTLGWNDKGPGICGDGIKDVDSNRFRRENVSS CCCCCCEEEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC EPVENIFWQKDIPAGSYVFEVNPTSIDLEGNPTKEIPFEIRFRYNDKEKVCLGSASSATG CCHHHHCCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCC GDGKQKSIKWNLGDPLPECNFMTADVHACKKKSECKQ CCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHCCC >Mature Secondary Structure MRPSRGPDARAAGTRQMSQFVATTTLSLMRSLGSTAERSVHRMQALLSREFPNGIGLELA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC EPVPRKDGTGIDWYTEREDPLVRLTDLPAETADFYKARLQHSVQAVLRAAAAHDSRGDTT CCCCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ARSTATALRNAVTFPGDENVWISGGSGRGDGMLVLTAWGYERHDAETSGGGEISGKTDRI HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC PIADNIKPPPARPGGRSWRWLAASLLWLIPIALAGATAWLLLPACGVSLPFGLTAFGKGG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC GAYCALVAPPPTVDQESLHTQELMAEAAVLEEQLRRHLNSCVRTPPQSDVSKDMDKKLDD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RKGQTGKLQVTLTWHTRDDLDLIAECPGGTLGWNDKGPGICGDGIKDVDSNRFRRENVSS CCCCCCEEEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC EPVENIFWQKDIPAGSYVFEVNPTSIDLEGNPTKEIPFEIRFRYNDKEKVCLGSASSATG CCHHHHCCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCC GDGKQKSIKWNLGDPLPECNFMTADVHACKKKSECKQ CCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA