Click here to switch to the map view.

The map label for this gene is degP [C]

Identifier: 13488111

GI number: 13488111

Start: 155336

End: 156994

Strand: Reverse

Name: degP [C]

Synonym: mll9173

Alternate gene names: 13488111

Gene position: 156994-155336 (Counterclockwise)

Preceding gene: 13488330

Following gene: 13488110

Centisome position: 44.61

GC content: 64.07

Gene sequence:

>1659_bases
ATGGCTGGAGGGGGCAACGTCCACTTCATTCGATCGACGCAAGCGCGATCCGTCGACGTATTGGCTGTTGACGGGAAGTC
GCTATGGCGTGACTGCGATGCGACGTTCGCCCGCATAGAAAAACTGTGCGGGGATGACGCGTCGCGGCTGTTCGCCGAAC
CGAACGTCAAGGAGCAGGACGACGGCCGCCTGGTCGTGGCCTGGTTCGGTGCATTCGACGACGAACCGAAGCAGCTGGAT
ATGCTCGACCGAGGTATGCGGTCGCGGGTCCTGTCGAGCCTGGCCGCACGGTTCGAGGCCCTTCGCCCGGCGCTGGCGGA
CCGGGAAATCGGCGAGACCGTCGCCGCGATGCTCAATGTCGCCGACGACAGCTCGATCGTGGCCGTCGGCGAAAATGCTG
TCCTCACGAACTGGGGAATGCTGCCTGAAGAGGCCCGCTCCTCCCCCGCCGCTTTCGTCCGGCACAGTGAGAGGACTATA
GCCTCCTACCTTCCGTCCGGAATATCGCCCCGAGTGCCCGGCCAGACGTGGACGATTGGCGGCGCCGCTCTCGGGACGGC
AAGGGTGGTGTCTGCACCGGAGCGTGCCGAGCCCTCCAAGCCCGTAAGCTCCTCCCCGGTGTCTCAACCGATGACTTCGG
CAAAAACCAGACGGATTTCGCTTTGGCCTGTCCTGGCGATAGCGCTTGTATTCGCGGCTTGCCTGATCTACGCGGCATGG
CCGGGCAACCTGCTTTATCCTGAGGCGCTTCAACCGCCGCAGCCGCCTTCTTTGGTGGACAACGCGGAGATCAACCGAAG
CCTCGAAGCGCGGATCGGCAAAATCAAAGCGGAACTCGCAAAGGCCGCATGCAATGCGGACGCATCAGTGCTTGGCCCCC
AGATTCTGGACCCCCAAAAGCCCGGCGCCGCCGTCGGGCCGCCTCCCCCGCCCGGTTCACCACAAGCCCTTCTAGCCTCC
CTTGACTCGGCCACGGTCCTGGTGCTTGCGCCTCTCACCGGGAACTCGCTCAGTACCGGAAGCGGATTCTTCGTCGGCCC
ACGAGACATCCTCACCAACAACCATGTCGTCGAGGGCGCTGGCGACACGGTGTTCGTCGCGAGCAAGGCGCTTGGGCGCG
CGGTTCCCGCGCATGTCGTCGCGAAAGCCGCCGCAAGCGCGACCGGAGACCCGGACTTCGCGCTCCTGCGCGTGGACGAC
GCGCCCAGCGGCGTGACGGCCCTACAACTTTCGACCGGAATCGGAAGGCTGGACAGCGTCATTGCGGGTGGATTTCCAGG
CTTCGTGATGTCCATGGACAAAACCTACCGGGACATCATCAACGGCGACACAAGCGGCATTGGCAATCTCGAGATGGTGG
TCACGCAAGGCAACGTGATGGCCATGCCCCAGGACGGCGCGACGAAAGTCATTACCCATTCCGCGAATATTTCGCGCGGC
AACAGCGGAGGCCCGCTTTCGGACGCTTGCGGCCGAGCGGTCGGGGTGAACACCTTCATAATCCTCGACGGAGAGAACGC
ACAGAAGCTGAACTTCTCCCTCAGCGCTCGCGACGCAATCCGCTTCCTGTCGTCAAACGGCGTGACGGTAACCACGACTG
ACAAGCCGTGCGTCCCAGCCGCGGCCCCGACGCCAGGGCAGCCGGGACCCGCCAAATGA

Upstream 100 bases:

>100_bases
ACTAAGCGCTTGTTGACTCAGAGTTTGGTTCCGTCGAAGTATGGCCGTCGGGGATGCCGCGCATAGTTGACGGCAAGTAG
GCGCGGCCGGGGAAGACTGG

Downstream 100 bases:

>100_bases
GCCAGTTCGTCGCCACCACCACGCTCAGCCTCATGCGTTCCCTCGGGTCCACCGCAGAACGTTCGGTCCATAGGATGCAG
GCGCTCCTCAGCCGGGAATT

Product: putative protease

Products: NA

Alternate protein names: Periplasmic Serine Proteinase; Protease/Peptidase; Protease; S1/S6 Family Peptidase

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MAGGGNVHFIRSTQARSVDVLAVDGKSLWRDCDATFARIEKLCGDDASRLFAEPNVKEQDDGRLVVAWFGAFDDEPKQLD
MLDRGMRSRVLSSLAARFEALRPALADREIGETVAAMLNVADDSSIVAVGENAVLTNWGMLPEEARSSPAAFVRHSERTI
ASYLPSGISPRVPGQTWTIGGAALGTARVVSAPERAEPSKPVSSSPVSQPMTSAKTRRISLWPVLAIALVFAACLIYAAW
PGNLLYPEALQPPQPPSLVDNAEINRSLEARIGKIKAELAKAACNADASVLGPQILDPQKPGAAVGPPPPPGSPQALLAS
LDSATVLVLAPLTGNSLSTGSGFFVGPRDILTNNHVVEGAGDTVFVASKALGRAVPAHVVAKAAASATGDPDFALLRVDD
APSGVTALQLSTGIGRLDSVIAGGFPGFVMSMDKTYRDIINGDTSGIGNLEMVVTQGNVMAMPQDGATKVITHSANISRG
NSGGPLSDACGRAVGVNTFIILDGENAQKLNFSLSARDAIRFLSSNGVTVTTTDKPCVPAAAPTPGQPGPAK

Sequences:

>Translated_552_residues
MAGGGNVHFIRSTQARSVDVLAVDGKSLWRDCDATFARIEKLCGDDASRLFAEPNVKEQDDGRLVVAWFGAFDDEPKQLD
MLDRGMRSRVLSSLAARFEALRPALADREIGETVAAMLNVADDSSIVAVGENAVLTNWGMLPEEARSSPAAFVRHSERTI
ASYLPSGISPRVPGQTWTIGGAALGTARVVSAPERAEPSKPVSSSPVSQPMTSAKTRRISLWPVLAIALVFAACLIYAAW
PGNLLYPEALQPPQPPSLVDNAEINRSLEARIGKIKAELAKAACNADASVLGPQILDPQKPGAAVGPPPPPGSPQALLAS
LDSATVLVLAPLTGNSLSTGSGFFVGPRDILTNNHVVEGAGDTVFVASKALGRAVPAHVVAKAAASATGDPDFALLRVDD
APSGVTALQLSTGIGRLDSVIAGGFPGFVMSMDKTYRDIINGDTSGIGNLEMVVTQGNVMAMPQDGATKVITHSANISRG
NSGGPLSDACGRAVGVNTFIILDGENAQKLNFSLSARDAIRFLSSNGVTVTTTDKPCVPAAAPTPGQPGPAK
>Mature_551_residues
AGGGNVHFIRSTQARSVDVLAVDGKSLWRDCDATFARIEKLCGDDASRLFAEPNVKEQDDGRLVVAWFGAFDDEPKQLDM
LDRGMRSRVLSSLAARFEALRPALADREIGETVAAMLNVADDSSIVAVGENAVLTNWGMLPEEARSSPAAFVRHSERTIA
SYLPSGISPRVPGQTWTIGGAALGTARVVSAPERAEPSKPVSSSPVSQPMTSAKTRRISLWPVLAIALVFAACLIYAAWP
GNLLYPEALQPPQPPSLVDNAEINRSLEARIGKIKAELAKAACNADASVLGPQILDPQKPGAAVGPPPPPGSPQALLASL
DSATVLVLAPLTGNSLSTGSGFFVGPRDILTNNHVVEGAGDTVFVASKALGRAVPAHVVAKAAASATGDPDFALLRVDDA
PSGVTALQLSTGIGRLDSVIAGGFPGFVMSMDKTYRDIINGDTSGIGNLEMVVTQGNVMAMPQDGATKVITHSANISRGN
SGGPLSDACGRAVGVNTFIILDGENAQKLNFSLSARDAIRFLSSNGVTVTTTDKPCVPAAAPTPGQPGPAK

Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 57248; Mature: 57116

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGGNVHFIRSTQARSVDVLAVDGKSLWRDCDATFARIEKLCGDDASRLFAEPNVKEQD
CCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
DGRLVVAWFGAFDDEPKQLDMLDRGMRSRVLSSLAARFEALRPALADREIGETVAAMLNV
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADDSSIVAVGENAVLTNWGMLPEEARSSPAAFVRHSERTIASYLPSGISPRVPGQTWTIG
CCCCCEEEECCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
GAALGTARVVSAPERAEPSKPVSSSPVSQPMTSAKTRRISLWPVLAIALVFAACLIYAAW
CHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHCC
PGNLLYPEALQPPQPPSLVDNAEINRSLEARIGKIKAELAKAACNADASVLGPQILDPQK
CCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PGAAVGPPPPPGSPQALLASLDSATVLVLAPLTGNSLSTGSGFFVGPRDILTNNHVVEGA
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCHHHHCCCCEEECC
GDTVFVASKALGRAVPAHVVAKAAASATGDPDFALLRVDDAPSGVTALQLSTGIGRLDSV
CCEEEEECHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHH
IAGGFPGFVMSMDKTYRDIINGDTSGIGNLEMVVTQGNVMAMPQDGATKVITHSANISRG
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEECCCCCCC
NSGGPLSDACGRAVGVNTFIILDGENAQKLNFSLSARDAIRFLSSNGVTVTTTDKPCVPA
CCCCCCHHHCCCEECCEEEEEEECCCCEEEEEEECHHHHHHHHCCCCEEEEECCCCCCCC
AAPTPGQPGPAK
CCCCCCCCCCCC
>Mature Secondary Structure 
AGGGNVHFIRSTQARSVDVLAVDGKSLWRDCDATFARIEKLCGDDASRLFAEPNVKEQD
CCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
DGRLVVAWFGAFDDEPKQLDMLDRGMRSRVLSSLAARFEALRPALADREIGETVAAMLNV
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADDSSIVAVGENAVLTNWGMLPEEARSSPAAFVRHSERTIASYLPSGISPRVPGQTWTIG
CCCCCEEEECCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
GAALGTARVVSAPERAEPSKPVSSSPVSQPMTSAKTRRISLWPVLAIALVFAACLIYAAW
CHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHCC
PGNLLYPEALQPPQPPSLVDNAEINRSLEARIGKIKAELAKAACNADASVLGPQILDPQK
CCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PGAAVGPPPPPGSPQALLASLDSATVLVLAPLTGNSLSTGSGFFVGPRDILTNNHVVEGA
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCHHHHCCCCEEECC
GDTVFVASKALGRAVPAHVVAKAAASATGDPDFALLRVDDAPSGVTALQLSTGIGRLDSV
CCEEEEECHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHH
IAGGFPGFVMSMDKTYRDIINGDTSGIGNLEMVVTQGNVMAMPQDGATKVITHSANISRG
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEECCCCCCC
NSGGPLSDACGRAVGVNTFIILDGENAQKLNFSLSARDAIRFLSSNGVTVTTTDKPCVPA
CCCCCCHHHCCCEECCEEEEEEECCCCEEEEEEECHHHHHHHHCCCCEEEEECCCCCCCC
AAPTPGQPGPAK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Serine endopeptidases [C]

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA