| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488107
Identifier: 13488107
GI number: 13488107
Start: 147126
End: 148094
Strand: Reverse
Name: 13488107
Synonym: mll9169
Alternate gene names: NA
Gene position: 148094-147126 (Counterclockwise)
Preceding gene: 13488108
Following gene: 13488106
Centisome position: 42.08
GC content: 60.47
Gene sequence:
>969_bases ATGATGCAGGTTCCGTTGAAAGTAGCGGAGGATGAGTCGCGCCTGTTCGGGCACGCCCTGATCGTGTTTCCACAAGAATT GGGCAGTTCCCGGCTGCTGCGGCTGTCGATCACGCGCAAGTCGGGAGACACACCGTATTTGGGCGATGGCGGGTGGCAGG CGCGGCCGGCTACCGTGGCGGCGGAGGTCGTGAACCGGACCACCGGATCGACGACGATGGTCGTAGGGCCTGAAGTCTGC GACCGAATCCCGGTCGATCTCCAGGTGAAGATCGAAGTCGATGGCCTGAACGTCTGGGGCAATGCGTTCTGGCCTCCGGT CACGCCACAACCTGGCGGATGGTCACAAGAGCTGACCGCTCCTCCCGTGGCCCTCCCTCCTCTGCCTGAACGTTTCATCG ATCGGGTTCCGGTTCCGGACCCACCATTGCCACCGCCGCCGATAGCCCCTGTTGCGCAACCTATCGCGAAGCCAAAGAGC GGGTGGCGGTACCTGTATTTTGTTATTCCTCTAGCCCTTCTTCTGGCTGCAGCAGGAACCTACGGCGGCTACAGACTGGG CTGGCTGGATCCCTGGATAAATCCGCCTGAGCCCTTGGCCGCGCGTTTCGAAAGGCTGAAGCGCACGGATAAGGATGGCC ACGAACTCTTCGCCTTGAGCGGCGACGCATACCGCCAGGGAAACGGAGGCATCGGCTTGCAGTCGATCAACCTTGCGATG GAACGGGGCAACCAGGACGCCAAGCTCCAGATCGCGCGCTGGTACGACCCGATCTCCTTCGATCCGGCCAAAGCGGATCG GCCTGACGCGAACAAGGCTGCCCGATACTATTTCGAGTTGGTAATAGAGGGCAAAGCGGAAGCCAAGGATTTGCTCCGTT CACTTTGTGCCAAAAACGCAAGCTCCCCTCAGGATCCTACGTTCAACGGGTTCCTGACGAACACCTATTGCGAGGGGACC TTGGAATGA
Upstream 100 bases:
>100_bases AAGGCATAACGGTAAACGTCGATGAGAACGAGCGACTGAGGGCAATCCTGGAGGCTCTCAATTCGGCGCCGCCGTCAGTC GAACCTGCAAGGACGGTTCG
Downstream 100 bases:
>100_bases CAACCAGGAACGGCATGGCTCGGCAACTCGCCGCTTGCGAAGCCATCGGAGGACAGAGGCAAATGCGGAAGAACGGTTTG TGGCTTGCCGTCGGGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MMQVPLKVAEDESRLFGHALIVFPQELGSSRLLRLSITRKSGDTPYLGDGGWQARPATVAAEVVNRTTGSTTMVVGPEVC DRIPVDLQVKIEVDGLNVWGNAFWPPVTPQPGGWSQELTAPPVALPPLPERFIDRVPVPDPPLPPPPIAPVAQPIAKPKS GWRYLYFVIPLALLLAAAGTYGGYRLGWLDPWINPPEPLAARFERLKRTDKDGHELFALSGDAYRQGNGGIGLQSINLAM ERGNQDAKLQIARWYDPISFDPAKADRPDANKAARYYFELVIEGKAEAKDLLRSLCAKNASSPQDPTFNGFLTNTYCEGT LE
Sequences:
>Translated_322_residues MMQVPLKVAEDESRLFGHALIVFPQELGSSRLLRLSITRKSGDTPYLGDGGWQARPATVAAEVVNRTTGSTTMVVGPEVC DRIPVDLQVKIEVDGLNVWGNAFWPPVTPQPGGWSQELTAPPVALPPLPERFIDRVPVPDPPLPPPPIAPVAQPIAKPKS GWRYLYFVIPLALLLAAAGTYGGYRLGWLDPWINPPEPLAARFERLKRTDKDGHELFALSGDAYRQGNGGIGLQSINLAM ERGNQDAKLQIARWYDPISFDPAKADRPDANKAARYYFELVIEGKAEAKDLLRSLCAKNASSPQDPTFNGFLTNTYCEGT LE >Mature_322_residues MMQVPLKVAEDESRLFGHALIVFPQELGSSRLLRLSITRKSGDTPYLGDGGWQARPATVAAEVVNRTTGSTTMVVGPEVC DRIPVDLQVKIEVDGLNVWGNAFWPPVTPQPGGWSQELTAPPVALPPLPERFIDRVPVPDPPLPPPPIAPVAQPIAKPKS GWRYLYFVIPLALLLAAAGTYGGYRLGWLDPWINPPEPLAARFERLKRTDKDGHELFALSGDAYRQGNGGIGLQSINLAM ERGNQDAKLQIARWYDPISFDPAKADRPDANKAARYYFELVIEGKAEAKDLLRSLCAKNASSPQDPTFNGFLTNTYCEGT LE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35293; Mature: 35293
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQVPLKVAEDESRLFGHALIVFPQELGSSRLLRLSITRKSGDTPYLGDGGWQARPATVA CCCCCCEECCCCHHHHEEEEEEEEHHCCCCEEEEEEEEECCCCCCEECCCCCCCCCHHHH AEVVNRTTGSTTMVVGPEVCDRIPVDLQVKIEVDGLNVWGNAFWPPVTPQPGGWSQELTA HHHHHCCCCCEEEEECHHHHCCCCCCEEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCC PPVALPPLPERFIDRVPVPDPPLPPPPIAPVAQPIAKPKSGWRYLYFVIPLALLLAAAGT CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCC YGGYRLGWLDPWINPPEPLAARFERLKRTDKDGHELFALSGDAYRQGNGGIGLQSINLAM CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHH ERGNQDAKLQIARWYDPISFDPAKADRPDANKAARYYFELVIEGKAEAKDLLRSLCAKNA HCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHCCC SSPQDPTFNGFLTNTYCEGTLE CCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MMQVPLKVAEDESRLFGHALIVFPQELGSSRLLRLSITRKSGDTPYLGDGGWQARPATVA CCCCCCEECCCCHHHHEEEEEEEEHHCCCCEEEEEEEEECCCCCCEECCCCCCCCCHHHH AEVVNRTTGSTTMVVGPEVCDRIPVDLQVKIEVDGLNVWGNAFWPPVTPQPGGWSQELTA HHHHHCCCCCEEEEECHHHHCCCCCCEEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCC PPVALPPLPERFIDRVPVPDPPLPPPPIAPVAQPIAKPKSGWRYLYFVIPLALLLAAAGT CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCC YGGYRLGWLDPWINPPEPLAARFERLKRTDKDGHELFALSGDAYRQGNGGIGLQSINLAM CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHH ERGNQDAKLQIARWYDPISFDPAKADRPDANKAARYYFELVIEGKAEAKDLLRSLCAKNA HCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHCCC SSPQDPTFNGFLTNTYCEGTLE CCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA