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The map label for this gene is 13488108

Identifier: 13488108

GI number: 13488108

Start: 148091

End: 150796

Strand: Reverse

Name: 13488108

Synonym: mll9170

Alternate gene names: NA

Gene position: 150796-148091 (Counterclockwise)

Preceding gene: 13488109

Following gene: 13488107

Centisome position: 42.85

GC content: 63.53

Gene sequence:

>2706_bases
ATGCGTGAAGAGTTGAAAAGAAGCTGCGGCACCGCCCTGAAATCGGCGCAGGATGGCCTTGCCTGGATCGGGACCGCCGC
CAACGCCGAGCGGGTCGGCGACACGCGCGCCAGCGCCGAACAGCATCTCAGGAAGTCGGTCGTCGCGGCCCGCAAGGCGA
TGGAAGCGATCGACCGCCCGATGTGCGTCGGCATATTCGGCCCCAGCCAGGCTGGCAAGTCGTATCTGGTGTCGGTTCTT
GCCCGCCATGGGAGCGCACCCTTGATGGCGCGCTTCGGCGATCTCGGCAGGGAGGTCGACTTCATACGCGAGATCAATCC
AGGCGGCGAACGCGAGTCGACAGGCCTGGTGACCCGCTTCTCTGTCAACGAGGAGCCCAGCCCCGCGGGCGCTCCGGTCG
TCCTGCGCCTGCTTAGCGAAACCGACATCGCGAAGATTCTGGGGAACAGCTTCTTCCTGGACGGGGACGCGAAGAAACGC
ACGCCGCTCGCGCCCGAGACCGTGGTGTCCGCCCTCGAGGCGGCGCGGAGGCGCGTGTCGTCGCAGGTTGCCACCGGCGG
ACTCGTCGAGGAGGACATCTGGGACATCCAGGAATATTTCGAGAAGCAGTTCGCCGGTATGCCGAACATCGAAACGCTCG
GCGCCTATTGGGAGGAGGCTGCGATCCTCGCGCCGCGGCTATCGATTGCGGACCGCGCGGAACTCTTCTCCGTGCTCTGG
GGCGGCTTTGGGAAATTCACCGATGTCTACCTTGAACTCGCGCAGGCGCTGGAGAAGCTCGGATTCGCCAAGGACGCCTA
CTGCTCCATCGAAGCGCTTGTTCCCCGGGACCGGAGCATCATCGACGTCGAGACTTTGCTCGGTCTTGGCAAACCCGGCC
AGGAGGAGCTGCTGATACGGCCAATGAAGGGTCCGGCCGTGTCGCTCCCGCGGCCCGTCATCACGGCCTTGGCCGCCGAA
CTCCGCATCGCCATCTCGCAGCGGCCGTGGCCGTTCTTCGACCACACGGACCTGCTCGACTTCCCCGGTGCGCGCAGCCG
CCAGAGGGTGGACCTGCAGGCCTATTTCGACGACAACCCCCAGGCGCTGAAGGACCTCTTCGTCAGGGGCAAGGTTGCCT
ACCTGTTCGACCGCTACGTCGCCGAGCAGGAACTCTCGAGCATGCTCCTTTGCATCAAGCCTTCGAACCAGGACGTCGCG
ACGCTTCCCGACATGATCGACGACTGGATCAGGGCGTCACATGGCGAGACCCCGGCCGACAGGGCGCGCGTCGAGACCGC
GCTTTTCCTGGTGCTGACGATGTTCGACATGCACTTCAGCGAAAAGGCGGGCGAGGAGGGGCAGAGCCTTTCGGACCGTT
TCAGCGCGCGAATGGGTTCCTCACTGACGCGGTATTTCGGGAAGGCCCACAAGTGGCCGTTCGAATGGACGCCGGGCAAG
CCGTTCAACAACACCTACTGGCTGCGCAATCCCAACTTCAAGGCCGAGTTCCTGATTAGGTACCGCGGCGGCGAAGAAGT
TGAGATTCTGCCCGACAAGGTCAAGAAGGTCGCCGCCATTCGCAAGGCATATCTCCAGGTCAGCGAGATCCAGCAGCATT
TCCGCGATCCGGCGAAGGCGTTCGACGAAGCCCTCAGGCTGAACGACGGCGGCGTCAGTTACCTGGCGGAAAACCTCGCG
GCGATCTGCCGTCCCGAGATCAAGTATGGACAGATACAGGGCCGCCTCGGGAACATCGCCCACGAGATACGCCGCGTGCT
CGCTCCCTATTTCGTCGAGAGCGACATCAACAAGCGTATCGCCGAGCGTCGGGAGGTATCGGACCAAATTCTTGCGTGCC
TCACCGAGACATGGGAGCGGGAGCAGTTCGGCGTGGCCATGAAGATGCTCCAGATTTCTCAGAACGGGATTTCCGAGCAT
CTCCACATCGAGTACGGCAACCGCATCAAGCGCCAGAACGCTCCCGAGGAGACCTCGGATGGTCGAGCCGATACCGTCGT
GAAGAAGCGCGTCGCTCCGCCTCCGCGGCCCGGCGCCCCTCCCCTGCCGGGGAACAAGAAGAAGACAGTCGCCGCCACGG
CGCCTTCCGGGCCGTCGGTTTCGCAAAAGGCGCTCCCCCGAGAGGCCTACCTCGCCCACTCGGCGATGCGCCACTGGCTG
GACGGGCTTCTGGCGCTATCAAGGAATGACGGCGCACTCCAGGCCATTGGCTTTACCCACAAACTGGCAGGCGAGCTGAT
CGCCGAGCTTGCCGCGGCGGCCCGGCGCACCGGGGTCGAGGAGCAGATTGCCGACGATCTCGCCAAGCTCTCTGGAAGTT
CGGTCGAGAGGTCTGACATCCTGCTCGAGAGGGCAGGTTTCCTCGCGACCAGCCGCATCAACCGTTTTGTCAGCACGCTT
GGCTTCGATGGAGTGCCGGAAGAGAAGCGGCCGATGGCCCCGGACGGCACGGAGGACGGCGAGATCAGGGTATTCGCCCG
CCGGCCGAACGTCACCAACTGCGACGAACTTGCCAAGGAACGGCGGAATTTCTCCTACCTGGCGCTCTCAGAGTGGATGT
ACGCCTTCAACCAGCTCGTTACCGACAATGTCCTCTCGGGCGAAGGCATAACGGTAAACGTCGATGAGAACGAGCGACTG
AGGGCAATCCTGGAGGCTCTCAATTCGGCGCCGCCGTCAGTCGAACCTGCAAGGACGGTTCGATGA

Upstream 100 bases:

>100_bases
CATGATGGAACTGAAGCTGGACACGCTCGCGGTCGAGACGGGCGACGGTTACTGGCTCGACACCGGCATAATCTCCATCC
AGTGAAATGGCGGCTGAACA

Downstream 100 bases:

>100_bases
TGCAGGTTCCGTTGAAAGTAGCGGAGGATGAGTCGCGCCTGTTCGGGCACGCCCTGATCGTGTTTCCACAAGAATTGGGC
AGTTCCCGGCTGCTGCGGCT

Product: virulence factor SrfC-like protein

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Factor Protein; Protein Virulence Factor-Like Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Virulence Effector Protein; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 901; Mature: 901

Protein sequence:

>901_residues
MREELKRSCGTALKSAQDGLAWIGTAANAERVGDTRASAEQHLRKSVVAARKAMEAIDRPMCVGIFGPSQAGKSYLVSVL
ARHGSAPLMARFGDLGREVDFIREINPGGERESTGLVTRFSVNEEPSPAGAPVVLRLLSETDIAKILGNSFFLDGDAKKR
TPLAPETVVSALEAARRRVSSQVATGGLVEEDIWDIQEYFEKQFAGMPNIETLGAYWEEAAILAPRLSIADRAELFSVLW
GGFGKFTDVYLELAQALEKLGFAKDAYCSIEALVPRDRSIIDVETLLGLGKPGQEELLIRPMKGPAVSLPRPVITALAAE
LRIAISQRPWPFFDHTDLLDFPGARSRQRVDLQAYFDDNPQALKDLFVRGKVAYLFDRYVAEQELSSMLLCIKPSNQDVA
TLPDMIDDWIRASHGETPADRARVETALFLVLTMFDMHFSEKAGEEGQSLSDRFSARMGSSLTRYFGKAHKWPFEWTPGK
PFNNTYWLRNPNFKAEFLIRYRGGEEVEILPDKVKKVAAIRKAYLQVSEIQQHFRDPAKAFDEALRLNDGGVSYLAENLA
AICRPEIKYGQIQGRLGNIAHEIRRVLAPYFVESDINKRIAERREVSDQILACLTETWEREQFGVAMKMLQISQNGISEH
LHIEYGNRIKRQNAPEETSDGRADTVVKKRVAPPPRPGAPPLPGNKKKTVAATAPSGPSVSQKALPREAYLAHSAMRHWL
DGLLALSRNDGALQAIGFTHKLAGELIAELAAAARRTGVEEQIADDLAKLSGSSVERSDILLERAGFLATSRINRFVSTL
GFDGVPEEKRPMAPDGTEDGEIRVFARRPNVTNCDELAKERRNFSYLALSEWMYAFNQLVTDNVLSGEGITVNVDENERL
RAILEALNSAPPSVEPARTVR

Sequences:

>Translated_901_residues
MREELKRSCGTALKSAQDGLAWIGTAANAERVGDTRASAEQHLRKSVVAARKAMEAIDRPMCVGIFGPSQAGKSYLVSVL
ARHGSAPLMARFGDLGREVDFIREINPGGERESTGLVTRFSVNEEPSPAGAPVVLRLLSETDIAKILGNSFFLDGDAKKR
TPLAPETVVSALEAARRRVSSQVATGGLVEEDIWDIQEYFEKQFAGMPNIETLGAYWEEAAILAPRLSIADRAELFSVLW
GGFGKFTDVYLELAQALEKLGFAKDAYCSIEALVPRDRSIIDVETLLGLGKPGQEELLIRPMKGPAVSLPRPVITALAAE
LRIAISQRPWPFFDHTDLLDFPGARSRQRVDLQAYFDDNPQALKDLFVRGKVAYLFDRYVAEQELSSMLLCIKPSNQDVA
TLPDMIDDWIRASHGETPADRARVETALFLVLTMFDMHFSEKAGEEGQSLSDRFSARMGSSLTRYFGKAHKWPFEWTPGK
PFNNTYWLRNPNFKAEFLIRYRGGEEVEILPDKVKKVAAIRKAYLQVSEIQQHFRDPAKAFDEALRLNDGGVSYLAENLA
AICRPEIKYGQIQGRLGNIAHEIRRVLAPYFVESDINKRIAERREVSDQILACLTETWEREQFGVAMKMLQISQNGISEH
LHIEYGNRIKRQNAPEETSDGRADTVVKKRVAPPPRPGAPPLPGNKKKTVAATAPSGPSVSQKALPREAYLAHSAMRHWL
DGLLALSRNDGALQAIGFTHKLAGELIAELAAAARRTGVEEQIADDLAKLSGSSVERSDILLERAGFLATSRINRFVSTL
GFDGVPEEKRPMAPDGTEDGEIRVFARRPNVTNCDELAKERRNFSYLALSEWMYAFNQLVTDNVLSGEGITVNVDENERL
RAILEALNSAPPSVEPARTVR
>Mature_901_residues
MREELKRSCGTALKSAQDGLAWIGTAANAERVGDTRASAEQHLRKSVVAARKAMEAIDRPMCVGIFGPSQAGKSYLVSVL
ARHGSAPLMARFGDLGREVDFIREINPGGERESTGLVTRFSVNEEPSPAGAPVVLRLLSETDIAKILGNSFFLDGDAKKR
TPLAPETVVSALEAARRRVSSQVATGGLVEEDIWDIQEYFEKQFAGMPNIETLGAYWEEAAILAPRLSIADRAELFSVLW
GGFGKFTDVYLELAQALEKLGFAKDAYCSIEALVPRDRSIIDVETLLGLGKPGQEELLIRPMKGPAVSLPRPVITALAAE
LRIAISQRPWPFFDHTDLLDFPGARSRQRVDLQAYFDDNPQALKDLFVRGKVAYLFDRYVAEQELSSMLLCIKPSNQDVA
TLPDMIDDWIRASHGETPADRARVETALFLVLTMFDMHFSEKAGEEGQSLSDRFSARMGSSLTRYFGKAHKWPFEWTPGK
PFNNTYWLRNPNFKAEFLIRYRGGEEVEILPDKVKKVAAIRKAYLQVSEIQQHFRDPAKAFDEALRLNDGGVSYLAENLA
AICRPEIKYGQIQGRLGNIAHEIRRVLAPYFVESDINKRIAERREVSDQILACLTETWEREQFGVAMKMLQISQNGISEH
LHIEYGNRIKRQNAPEETSDGRADTVVKKRVAPPPRPGAPPLPGNKKKTVAATAPSGPSVSQKALPREAYLAHSAMRHWL
DGLLALSRNDGALQAIGFTHKLAGELIAELAAAARRTGVEEQIADDLAKLSGSSVERSDILLERAGFLATSRINRFVSTL
GFDGVPEEKRPMAPDGTEDGEIRVFARRPNVTNCDELAKERRNFSYLALSEWMYAFNQLVTDNVLSGEGITVNVDENERL
RAILEALNSAPPSVEPARTVR

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99884; Mature: 99884

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREELKRSCGTALKSAQDGLAWIGTAANAERVGDTRASAEQHLRKSVVAARKAMEAIDRP
CCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MCVGIFGPSQAGKSYLVSVLARHGSAPLMARFGDLGREVDFIREINPGGERESTGLVTRF
EEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEE
SVNEEPSPAGAPVVLRLLSETDIAKILGNSFFLDGDAKKRTPLAPETVVSALEAARRRVS
ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
SQVATGGLVEEDIWDIQEYFEKQFAGMPNIETLGAYWEEAAILAPRLSIADRAELFSVLW
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGFGKFTDVYLELAQALEKLGFAKDAYCSIEALVPRDRSIIDVETLLGLGKPGQEELLIR
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEHHHHHCCCCCCCCCEEEE
PMKGPAVSLPRPVITALAAELRIAISQRPWPFFDHTDLLDFPGARSRQRVDLQAYFDDNP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCH
QALKDLFVRGKVAYLFDRYVAEQELSSMLLCIKPSNQDVATLPDMIDDWIRASHGETPAD
HHHHHHHHHCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHH
RARVETALFLVLTMFDMHFSEKAGEEGQSLSDRFSARMGSSLTRYFGKAHKWPFEWTPGK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PFNNTYWLRNPNFKAEFLIRYRGGEEVEILPDKVKKVAAIRKAYLQVSEIQQHFRDPAKA
CCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FDEALRLNDGGVSYLAENLAAICRPEIKYGQIQGRLGNIAHEIRRVLAPYFVESDINKRI
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERREVSDQILACLTETWEREQFGVAMKMLQISQNGISEHLHIEYGNRIKRQNAPEETSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCC
GRADTVVKKRVAPPPRPGAPPLPGNKKKTVAATAPSGPSVSQKALPREAYLAHSAMRHWL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHH
DGLLALSRNDGALQAIGFTHKLAGELIAELAAAARRTGVEEQIADDLAKLSGSSVERSDI
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
LLERAGFLATSRINRFVSTLGFDGVPEEKRPMAPDGTEDGEIRVFARRPNVTNCDELAKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
RRNFSYLALSEWMYAFNQLVTDNVLSGEGITVNVDENERLRAILEALNSAPPSVEPARTV
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MREELKRSCGTALKSAQDGLAWIGTAANAERVGDTRASAEQHLRKSVVAARKAMEAIDRP
CCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MCVGIFGPSQAGKSYLVSVLARHGSAPLMARFGDLGREVDFIREINPGGERESTGLVTRF
EEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEE
SVNEEPSPAGAPVVLRLLSETDIAKILGNSFFLDGDAKKRTPLAPETVVSALEAARRRVS
ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
SQVATGGLVEEDIWDIQEYFEKQFAGMPNIETLGAYWEEAAILAPRLSIADRAELFSVLW
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGFGKFTDVYLELAQALEKLGFAKDAYCSIEALVPRDRSIIDVETLLGLGKPGQEELLIR
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEHHHHHCCCCCCCCCEEEE
PMKGPAVSLPRPVITALAAELRIAISQRPWPFFDHTDLLDFPGARSRQRVDLQAYFDDNP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCH
QALKDLFVRGKVAYLFDRYVAEQELSSMLLCIKPSNQDVATLPDMIDDWIRASHGETPAD
HHHHHHHHHCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHH
RARVETALFLVLTMFDMHFSEKAGEEGQSLSDRFSARMGSSLTRYFGKAHKWPFEWTPGK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PFNNTYWLRNPNFKAEFLIRYRGGEEVEILPDKVKKVAAIRKAYLQVSEIQQHFRDPAKA
CCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FDEALRLNDGGVSYLAENLAAICRPEIKYGQIQGRLGNIAHEIRRVLAPYFVESDINKRI
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERREVSDQILACLTETWEREQFGVAMKMLQISQNGISEHLHIEYGNRIKRQNAPEETSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCC
GRADTVVKKRVAPPPRPGAPPLPGNKKKTVAATAPSGPSVSQKALPREAYLAHSAMRHWL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHH
DGLLALSRNDGALQAIGFTHKLAGELIAELAAAARRTGVEEQIADDLAKLSGSSVERSDI
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH
LLERAGFLATSRINRFVSTLGFDGVPEEKRPMAPDGTEDGEIRVFARRPNVTNCDELAKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH
RRNFSYLALSEWMYAFNQLVTDNVLSGEGITVNVDENERLRAILEALNSAPPSVEPARTV
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA