| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is gsiC [H]
Identifier: 13488089
GI number: 13488089
Start: 124778
End: 125719
Strand: Reverse
Name: gsiC [H]
Synonym: mll9144
Alternate gene names: 13488089
Gene position: 125719-124778 (Counterclockwise)
Preceding gene: 13488090
Following gene: 13488088
Centisome position: 35.72
GC content: 59.13
Gene sequence:
>942_bases ATGTTGGAATATATCTCCGCGCGCTGCTTGCGTGCCTTGGCGACCCTTCTGTTGATCGTGACAATCACTTTCGTCGTCCT TCGCCTCTCAGGCGACCCGGCCATCAATATTCTGGGCCTCGATGCCTCGGGCGAGGCCATCCGCGAATTTCGCCGAAGCT GGGGGCTCGACCAGTCCATATGGATTCAATATGTCAGATATCTGCAGGCGGTCATGGAGGGAAATCTCGGACGCTCCATG CTTGACGGGCGCAACGCATTGGATGCCGTCATGGAACGCTTGCCGGCGACGTTGGCGATCACCGTTCCTGGCTTTATCCT GCAATTGCTGATCGGCATCCCGGCTGGCGTATTCAGTGCCCTTTGGCGCAACACTTGGGCTGATCGGCTCATCATGACCG GGTCCATTGTCGGCTTCACCATGCCGAGCTTCGTCCTCGGTCTGCTGTTGGTAATGCTGTTTGCCGTCAGATTGCACTGG CTCCCCTCTGGAGGTGCGGGCACTGTCTTGCATGTTATCCTGCCCGTGCTGACACTCGGCGTGTTCGGTGGCGCAACGCT GGCCCGATTCACACGTTCGGCGATCATCGACGTACTAGGCCAGCCGCACGTGCGGGCCGCGACGCTCAGGGGGATTCCGC GTTCGCAAATTATGTTGCTCCATGTGGTTCCGAATGCGGCCCTGCCGATCGTCACCATCATTGGACTGATGCTGGGTCGC CTGGTGGCGGGAGCAGTGGTCGTTGAAAGCGTGTTTTCCTGGCCAGGAATCGGCCGATTGTTGGTCTCTTCGGTCGCAAA CCGGGATCTAGCCGTGGTTCAGACGATCCTGCTGATGATAGGTGTCGCCATGGTTCTCGCCAACTTCGGCGTGGACCTAC TCTATGGACTTCTAGATCCCCGTCTGCGGCACGCGCAGAGCGACGGCGCAGGCAAAGGATGA
Upstream 100 bases:
>100_bases AACGGCCTGAGCTGCGCATCATCGCGCCAAACCGCTCCGTAGCGTGCCATCACCCCCAAGACGACATGGTTTCCTCGCGC GGGAAAATGGAGAACGCGTG
Downstream 100 bases:
>100_bases CCCAGATGGCTACGGTGGCGGCTCGCTCTATGCCCACGTGGCGCCGCATGGCGCGGCGTTTTCCTCCTTCAGTGCTCCTC GCAATTCTCTGGATCGCGGT
Product: oligopeptide ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLEYISARCLRALATLLLIVTITFVVLRLSGDPAINILGLDASGEAIREFRRSWGLDQSIWIQYVRYLQAVMEGNLGRSM LDGRNALDAVMERLPATLAITVPGFILQLLIGIPAGVFSALWRNTWADRLIMTGSIVGFTMPSFVLGLLLVMLFAVRLHW LPSGGAGTVLHVILPVLTLGVFGGATLARFTRSAIIDVLGQPHVRAATLRGIPRSQIMLLHVVPNAALPIVTIIGLMLGR LVAGAVVVESVFSWPGIGRLLVSSVANRDLAVVQTILLMIGVAMVLANFGVDLLYGLLDPRLRHAQSDGAGKG
Sequences:
>Translated_313_residues MLEYISARCLRALATLLLIVTITFVVLRLSGDPAINILGLDASGEAIREFRRSWGLDQSIWIQYVRYLQAVMEGNLGRSM LDGRNALDAVMERLPATLAITVPGFILQLLIGIPAGVFSALWRNTWADRLIMTGSIVGFTMPSFVLGLLLVMLFAVRLHW LPSGGAGTVLHVILPVLTLGVFGGATLARFTRSAIIDVLGQPHVRAATLRGIPRSQIMLLHVVPNAALPIVTIIGLMLGR LVAGAVVVESVFSWPGIGRLLVSSVANRDLAVVQTILLMIGVAMVLANFGVDLLYGLLDPRLRHAQSDGAGKG >Mature_313_residues MLEYISARCLRALATLLLIVTITFVVLRLSGDPAINILGLDASGEAIREFRRSWGLDQSIWIQYVRYLQAVMEGNLGRSM LDGRNALDAVMERLPATLAITVPGFILQLLIGIPAGVFSALWRNTWADRLIMTGSIVGFTMPSFVLGLLLVMLFAVRLHW LPSGGAGTVLHVILPVLTLGVFGGATLARFTRSAIIDVLGQPHVRAATLRGIPRSQIMLLHVVPNAALPIVTIIGLMLGR LVAGAVVVESVFSWPGIGRLLVSSVANRDLAVVQTILLMIGVAMVLANFGVDLLYGLLDPRLRHAQSDGAGKG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=40, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=37.8980891719745, Blast_Score=207, Evalue=6e-55, Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=33.6283185840708, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=34.7402597402597, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1787761, Length=325, Percent_Identity=36.6153846153846, Blast_Score=167, Evalue=6e-43, Organism=Escherichia coli, GI1787550, Length=279, Percent_Identity=29.3906810035842, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788504, Length=282, Percent_Identity=24.822695035461, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33611; Mature: 33611
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYISARCLRALATLLLIVTITFVVLRLSGDPAINILGLDASGEAIREFRRSWGLDQSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHH WIQYVRYLQAVMEGNLGRSMLDGRNALDAVMERLPATLAITVPGFILQLLIGIPAGVFSA HHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHH LWRNTWADRLIMTGSIVGFTMPSFVLGLLLVMLFAVRLHWLPSGGAGTVLHVILPVLTLG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VFGGATLARFTRSAIIDVLGQPHVRAATLRGIPRSQIMLLHVVPNAALPIVTIIGLMLGR HHCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHH LVAGAVVVESVFSWPGIGRLLVSSVANRDLAVVQTILLMIGVAMVLANFGVDLLYGLLDP HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH RLRHAQSDGAGKG HHHHHCCCCCCCC >Mature Secondary Structure MLEYISARCLRALATLLLIVTITFVVLRLSGDPAINILGLDASGEAIREFRRSWGLDQSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHH WIQYVRYLQAVMEGNLGRSMLDGRNALDAVMERLPATLAITVPGFILQLLIGIPAGVFSA HHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHH LWRNTWADRLIMTGSIVGFTMPSFVLGLLLVMLFAVRLHWLPSGGAGTVLHVILPVLTLG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VFGGATLARFTRSAIIDVLGQPHVRAATLRGIPRSQIMLLHVVPNAALPIVTIIGLMLGR HHCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHH LVAGAVVVESVFSWPGIGRLLVSSVANRDLAVVQTILLMIGVAMVLANFGVDLLYGLLDP HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH RLRHAQSDGAGKG HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]