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The map label for this gene is dppC [H]

Identifier: 13488088

GI number: 13488088

Start: 123891

End: 124748

Strand: Reverse

Name: dppC [H]

Synonym: mll9143

Alternate gene names: 13488088

Gene position: 124748-123891 (Counterclockwise)

Preceding gene: 13488089

Following gene: 13488087

Centisome position: 35.45

GC content: 58.74

Gene sequence:

>858_bases
ATGCCCACGTGGCGCCGCATGGCGCGGCGTTTTCCTCCTTCAGTGCTCCTCGCAATTCTCTGGATCGCGGTCATGGGTGT
AATCGCGCTGTTGGCAAACCATCTCGCTCCCTTTGACATAGCGGCGACGGATTTGCGTGCACGCCTTCGCCCTCCCGTTT
TCCTGGCCGGGGGAGACTGGAAGCATCCTCTTGGAACCGACCAGTTGGGCCGCGATACGCTTTCGCGTCTGTGTTTGTCG
ATCCGAACGAGCATGACGATCGGGCTAATTTCGACATTCATCGCGGCAGCCATTGGTATCGGGCTTGGGTTCCTTGCAGC
CCACAGCCGGGGTCGTCTTGAGCAGATCATCCTGATGCTGATCGATGCTCAGGCCGCTATTCCCTTCATGATCGTCGCGC
TGGCCGTTCTCGCCTTTTTCGGCAATAGTCTCGTCCTTTTCACGGTGCTCCTGGGCTTTTTTGGATGGGAGCGCATCGCC
CGCCTCTGCCGCGGACTGGCTCTGTCAGCATCCGAGCAGGGCTACACAATTGCGGTGCGGGATATCGGTGCTTCGCCTAT
GCGCGTGTATGCACTGCACATCCTTCCTAACGTTGCCTCCAGCGTGATCGTCGCTATGACGCTCAATCTGCCCGAAGTCA
TCTTGCTCGAAACGAGCCTGTCATTCCTTGGACTTGGTGTGCAGCCACCGCTGTCGAGCCTTGGCAACATGCTTGGAGCT
GCGCGCGACTATATGGAAGGAGCGCCTTGGCTCGTCTTCATCCCGAGCGCCGTTATCATGCTAACTGCGCTATCGATTTC
CATTGTCGGTGATTGGCTGCGGGACCGCGCCGATCCCACCAGCGAAAGTGCCCGTTGA

Upstream 100 bases:

>100_bases
TGGACCTACTCTATGGACTTCTAGATCCCCGTCTGCGGCACGCGCAGAGCGACGGCGCAGGCAAAGGATGACCCAGATGG
CTACGGTGGCGGCTCGCTCT

Downstream 100 bases:

>100_bases
GCGATCGCCTTGACGAGGCCACGACCGCACATTGAGCACGCTCGTCCACCCGAAAGTGTTGCAGTGTTTCCACTTCCCAT
GAAGGCATCAGTATGAGTTG

Product: dipeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPTWRRMARRFPPSVLLAILWIAVMGVIALLANHLAPFDIAATDLRARLRPPVFLAGGDWKHPLGTDQLGRDTLSRLCLS
IRTSMTIGLISTFIAAAIGIGLGFLAAHSRGRLEQIILMLIDAQAAIPFMIVALAVLAFFGNSLVLFTVLLGFFGWERIA
RLCRGLALSASEQGYTIAVRDIGASPMRVYALHILPNVASSVIVAMTLNLPEVILLETSLSFLGLGVQPPLSSLGNMLGA
ARDYMEGAPWLVFIPSAVIMLTALSISIVGDWLRDRADPTSESAR

Sequences:

>Translated_285_residues
MPTWRRMARRFPPSVLLAILWIAVMGVIALLANHLAPFDIAATDLRARLRPPVFLAGGDWKHPLGTDQLGRDTLSRLCLS
IRTSMTIGLISTFIAAAIGIGLGFLAAHSRGRLEQIILMLIDAQAAIPFMIVALAVLAFFGNSLVLFTVLLGFFGWERIA
RLCRGLALSASEQGYTIAVRDIGASPMRVYALHILPNVASSVIVAMTLNLPEVILLETSLSFLGLGVQPPLSSLGNMLGA
ARDYMEGAPWLVFIPSAVIMLTALSISIVGDWLRDRADPTSESAR
>Mature_284_residues
PTWRRMARRFPPSVLLAILWIAVMGVIALLANHLAPFDIAATDLRARLRPPVFLAGGDWKHPLGTDQLGRDTLSRLCLSI
RTSMTIGLISTFIAAAIGIGLGFLAAHSRGRLEQIILMLIDAQAAIPFMIVALAVLAFFGNSLVLFTVLLGFFGWERIAR
LCRGLALSASEQGYTIAVRDIGASPMRVYALHILPNVASSVIVAMTLNLPEVILLETSLSFLGLGVQPPLSSLGNMLGAA
RDYMEGAPWLVFIPSAVIMLTALSISIVGDWLRDRADPTSESAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=36.101083032491, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1789964, Length=253, Percent_Identity=35.9683794466403, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787760, Length=275, Percent_Identity=33.4545454545455, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=31.7857142857143, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=31.8840579710145, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=31.6872427983539, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1788505, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30742; Mature: 30611

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTWRRMARRFPPSVLLAILWIAVMGVIALLANHLAPFDIAATDLRARLRPPVFLAGGDW
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCC
KHPLGTDQLGRDTLSRLCLSIRTSMTIGLISTFIAAAIGIGLGFLAAHSRGRLEQIILML
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IDAQAAIPFMIVALAVLAFFGNSLVLFTVLLGFFGWERIARLCRGLALSASEQGYTIAVR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DIGASPMRVYALHILPNVASSVIVAMTLNLPEVILLETSLSFLGLGVQPPLSSLGNMLGA
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHH
ARDYMEGAPWLVFIPSAVIMLTALSISIVGDWLRDRADPTSESAR
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PTWRRMARRFPPSVLLAILWIAVMGVIALLANHLAPFDIAATDLRARLRPPVFLAGGDW
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCC
KHPLGTDQLGRDTLSRLCLSIRTSMTIGLISTFIAAAIGIGLGFLAAHSRGRLEQIILML
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IDAQAAIPFMIVALAVLAFFGNSLVLFTVLLGFFGWERIARLCRGLALSASEQGYTIAVR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
DIGASPMRVYALHILPNVASSVIVAMTLNLPEVILLETSLSFLGLGVQPPLSSLGNMLGA
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHH
ARDYMEGAPWLVFIPSAVIMLTALSISIVGDWLRDRADPTSESAR
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]