| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488087
Identifier: 13488087
GI number: 13488087
Start: 123076
End: 123798
Strand: Reverse
Name: 13488087
Synonym: mll9142
Alternate gene names: NA
Gene position: 123798-123076 (Counterclockwise)
Preceding gene: 13488088
Following gene: 13488086
Centisome position: 35.18
GC content: 62.24
Gene sequence:
>723_bases ATGAGTTGTGCCCAACCGAGTGAACGCCGATACGCAATCTACTACGCGCCAAGGCCTGAACACCCGCTGACGGCCGCCGC AGTACATTGGCTCGGCCGCGATGCGTTCGGCAGGGTTGAAGTTGGCGGAGACGCCCGACCCGAGGGCGAGGTCCTTCTCA CGTCGGAACCGCGCCGGTACGGCTTTCACGCGACACTCAAGGCACCCTTCCGGTTGAGAGAAGGCGCTTCGGCCGAGGAT TTGGAGGAGGCGCTCGGTGGGTTTGCAGCGTCACGGCCGGCCTGCCCGATCGGGCCATTGAAAATAGATCTCATTGACGG TTTCTTCGCGCTCGTTCCCGTCAGTCCCATCCCGGCCTTGCGCGGGTTTGCGGCGCAGATCGTCGAAGAATTTGACTGTT TTCGGGCACCAATGGATGGAGACGAGCTCGAGCGGCGCATGAGCCGCCAATTCGACGAGGTCGAGATGACCAACCTCGTC ACCTGGGGCTACCCCTACGTCTTGGGCCGGTTTCGCTTCCACCTGACCTTGACCGATCGCGTACCCGAAAACGGGCGCGC CGCAACGCGGGCACGCCTGGAGGAGAGGTTCGGGCCGTATCTATCCGAAGATTATCATATCGACACCCTGTCGCTCTTCG TGCAGGAACACCGTGGTGCCGATTTCGCGGTCCGATCGCAGTTCGCACTGAAGACCGGCGCGGCCCTTACGTCGGTGGTT TGA
Upstream 100 bases:
>100_bases CCCGTTGAGCGATCGCCTTGACGAGGCCACGACCGCACATTGAGCACGCTCGTCCACCCGAAAGTGTTGCAGTGTTTCCA CTTCCCATGAAGGCATCAGT
Downstream 100 bases:
>100_bases AGCCATGAAATTGTCTGGCGGTTTTGTCCTTGTCGTCGGTCCCAGCGGCGCCGGCAAGGATACCCTTATCGACTTTGCGC GCGATCGTCTTAGGGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSCAQPSERRYAIYYAPRPEHPLTAAAVHWLGRDAFGRVEVGGDARPEGEVLLTSEPRRYGFHATLKAPFRLREGASAED LEEALGGFAASRPACPIGPLKIDLIDGFFALVPVSPIPALRGFAAQIVEEFDCFRAPMDGDELERRMSRQFDEVEMTNLV TWGYPYVLGRFRFHLTLTDRVPENGRAATRARLEERFGPYLSEDYHIDTLSLFVQEHRGADFAVRSQFALKTGAALTSVV
Sequences:
>Translated_240_residues MSCAQPSERRYAIYYAPRPEHPLTAAAVHWLGRDAFGRVEVGGDARPEGEVLLTSEPRRYGFHATLKAPFRLREGASAED LEEALGGFAASRPACPIGPLKIDLIDGFFALVPVSPIPALRGFAAQIVEEFDCFRAPMDGDELERRMSRQFDEVEMTNLV TWGYPYVLGRFRFHLTLTDRVPENGRAATRARLEERFGPYLSEDYHIDTLSLFVQEHRGADFAVRSQFALKTGAALTSVV >Mature_239_residues SCAQPSERRYAIYYAPRPEHPLTAAAVHWLGRDAFGRVEVGGDARPEGEVLLTSEPRRYGFHATLKAPFRLREGASAEDL EEALGGFAASRPACPIGPLKIDLIDGFFALVPVSPIPALRGFAAQIVEEFDCFRAPMDGDELERRMSRQFDEVEMTNLVT WGYPYVLGRFRFHLTLTDRVPENGRAATRARLEERFGPYLSEDYHIDTLSLFVQEHRGADFAVRSQFALKTGAALTSVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26822; Mature: 26690
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCAQPSERRYAIYYAPRPEHPLTAAAVHWLGRDAFGRVEVGGDARPEGEVLLTSEPRRY CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCHH GFHATLKAPFRLREGASAEDLEEALGGFAASRPACPIGPLKIDLIDGFFALVPVSPIPAL CEEEEEECCEEECCCCCHHHHHHHHCCHHCCCCCCCCCCEEEEHHHCCCEECCCCCCHHH RGFAAQIVEEFDCFRAPMDGDELERRMSRQFDEVEMTNLVTWGYPYVLGRFRFHLTLTDR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHEEECCCHHHEEEEEEEEEEECC VPENGRAATRARLEERFGPYLSEDYHIDTLSLFVQEHRGADFAVRSQFALKTGAALTSVV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHCC >Mature Secondary Structure SCAQPSERRYAIYYAPRPEHPLTAAAVHWLGRDAFGRVEVGGDARPEGEVLLTSEPRRY CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCHH GFHATLKAPFRLREGASAEDLEEALGGFAASRPACPIGPLKIDLIDGFFALVPVSPIPAL CEEEEEECCEEECCCCCHHHHHHHHCCHHCCCCCCCCCCEEEEHHHCCCEECCCCCCHHH RGFAAQIVEEFDCFRAPMDGDELERRMSRQFDEVEMTNLVTWGYPYVLGRFRFHLTLTDR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHEEECCCHHHEEEEEEEEEEECC VPENGRAATRARLEERFGPYLSEDYHIDTLSLFVQEHRGADFAVRSQFALKTGAALTSVV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA