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The map label for this gene is sdiA [C]

Identifier: 13488084

GI number: 13488084

Start: 117543

End: 119981

Strand: Reverse

Name: sdiA [C]

Synonym: mll9138

Alternate gene names: 13488084

Gene position: 119981-117543 (Counterclockwise)

Preceding gene: 13488085

Following gene: 13488083

Centisome position: 34.09

GC content: 61.5

Gene sequence:

>2439_bases
ATGACATCGCTTGCCGTCAGTCGGGCATCCAGTATCGCAAATATTGCGCCACCTGGGGCACGGGCGCATAGATATCGCAT
AAATGCGGACTTCCCACGCACGGCGATCGTCCACCAGATTCTGGGCCGCCCTGAGGCGATTGTCGTCCTAGAGGCCCCCG
CCGGCATGGGCAAGTCGGTGATTTTGGACCAGATCGCCGGGCAGAAAAAGCTCAGGGTTCATGCCGACGCCAACCCGCCG
AAGCTGCAAACCAACAGGCTTGCGCTGTGGGACATCCCGCCCCACGCGATTGCGGGACCGTTGCCGGAGCAGCTTCTGTC
AGGCGGCAGCCGGGCCATAATCGCTAAACGCCCGGACACGGAAATACCAGGCCTGCCCCGCGCTCTCGCCTATGGCGCGG
CACATGTGCTGGATCGGGAGATGCTGCTGGTTTCCGCCGAGGAGGGCGAGCGATTATTTGGACCGAAGCAGGCGAAGCGG
ATAATGGCGGTTTCGGGTGGATGGCCGCTCATTGCTTTCCGCGGCGACAGCTCTGGCAACCTGTCGCAGTTCCTGCGCTT
CGAGTTTCTCGCTGATATGGTTGACGAAGAATTGGTCGATCTGAAGCTGCTTGCCGAAGGTGCCGCTCTACCGCCTCGCA
GCAGTGATGGACTTTTTCCGATAGCGCGGGTGGGACAGAATCGCCGGCTTCAGCTTTGCGCGCAGGGTCTTTCCAGCCAC
TTGTCCTCAGCTGTCGAGGCGGTGATATCGGAGCGCCTGTCGACACCTGCGGGCGCCAATGCGATTGCCGAAACCTATGC
CGAACACGCAAGGCCGGTGGATGCGATCACCACATACCAACAGGTCGGCTTTTACGACAAGGCGCTGGCCGAGTTCAACC
GCGCCGGCGGCCTGTTCTTCATCTACTTCCACGGCACTGCCGCAAACGACCGCGTGCTTGCCGGCTTCCCTGCTAGCTTC
GCGCATCAACGCGAAATCCTTGTCCTGTCGCTGGCGCTGCCGTCGCTCAAGCGCGGGGATATTTCCCGGGCACGGCGGCT
GATCGCCGACCGGTTCGGCGACAGCGCCAACGATGTCGAGACCGTGTTCGCCTCGCGCACGCTGTTCTCCCGCGAGTTCC
GGGAATTCCGCTTCCTGATGCTAATCTATGAGGATCACCAGTTCAGTGAGGAACTGCTCGCCACACTTTTCAACTTGATT
GCCGAATTCCCGGGTGACGCGCATCTCTTCCGCGGCACTTTTTACAATTCGATGCTGGAATATTACATCCGCCGCCGCGA
ATTCGCCAAGGCCGAGCAGATGGCGCAGCGGGCCATGCATCACTATCAGTCCGCCCATGCGCCGATACTCAGCTTCTATA
TCAGCCTCCACCAGGCGATGATGGCGTTGATGAAAGGCGACACGATCGCGGCCGGCAAACATGCGATGCTGTCGGCGAAG
AGCCTCTCGGAGGTGCCGTTCGAAACGCTGAACGACATGCGGCTACAGGCGCTCTTGGAGGCTTGCGTCGACTATGACGG
CGGCCGGGCCGAATCTTTGGCGCGCTTCCTCAACACCGAAATCGACGATTTTTCGCATGGCGAGATCTGGCCGAGCCTTA
TGGAATTCACCCTGCTCTATGGCAGCCAGGCGATGGCCACCCATTTCTCGCTCCTGGCGGCGCGCGGGTTCCTTGACCGC
TGGCGGGTGTATCAAATTACCAACCATGCCTTCCAGGCCATGGTCAGCATCCGCGAGGCGATCATCCTCCAGAATGCCAA
TCGCTGGTCGGAGGCCGCGACGCGGCTGAGAAGCATCGCCACATCAATCGATCGCGACTGGGTGCTCGCCCATCCCGGCG
ACGTGTCCCGCCTGGTCGACCGCGACGATATCGGCTTGCTGCTAGCCTGGCTGCGGCAAATCCTGCATGAGCAACCCGAC
CTGCCGCCGATCGAAACGCTGCTCGCCGCTACATTGAGCAATTTGAGTATTACGGACCGGCAGCGTATGGGGGTCAACGT
CTGGCTCGCCTATATCCACCGCCGTCGGCGGGATCTCACCAAGGCGCGCGCCATCCTGCTGCGCGTGTTCGAGGATGCGG
CCCGGCTGGGTTCGATCGCGCCGCTTGCCGAGGAGAAACTTTTCCTCGGCGAACTGTTGGACAACAAGCGCATCAGCGAA
TTCCTCGGCGCTTCGTCATCGGCACGCCAGGTGATCCGCAAACTGCGCGACAGCGGCCATCTGAGCCCCGTTCCCGGCAT
CCGCAGCGAACTGTCGCGGCGTGAAAACAAGATTCTGGTGATCGTCTGCGAGGGCGCCGCCAACAAATCGATCGCCGTCA
TGCTCGGCGTCAGCGAGGCGACGGTGAAATTTCATCTGGGCAACGTCTATCGCAAGCTCGGCTGCCGGACCCGGCAGGAG
GCGATCAGCATCGCCAGGGCTACCGGGATCGTGGGCTAG

Upstream 100 bases:

>100_bases
CTTTGGTATCTGGACCGGCGGCAAAGCGGCGTTGCCTGAAACTAAAGATGCCCCAAGGCTCCGCAGGCAGAGGGACCTAA
TGTGACAAAACCCATACCTG

Downstream 100 bases:

>100_bases
AGCCCCGCAAGCTTTTGTCTGCCGTAAATCGGCCCGGATGTTCCGCTCGCACTCGGTTCCGCGTGCTCTTTGGTACGTCT
GCGCCTGTCCACAAATTGCT

Product: two-component regulator

Products: NA

Alternate protein names: Two Component Response Regulator; Two-Component Nodulation Response Regulator Protein

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MTSLAVSRASSIANIAPPGARAHRYRINADFPRTAIVHQILGRPEAIVVLEAPAGMGKSVILDQIAGQKKLRVHADANPP
KLQTNRLALWDIPPHAIAGPLPEQLLSGGSRAIIAKRPDTEIPGLPRALAYGAAHVLDREMLLVSAEEGERLFGPKQAKR
IMAVSGGWPLIAFRGDSSGNLSQFLRFEFLADMVDEELVDLKLLAEGAALPPRSSDGLFPIARVGQNRRLQLCAQGLSSH
LSSAVEAVISERLSTPAGANAIAETYAEHARPVDAITTYQQVGFYDKALAEFNRAGGLFFIYFHGTAANDRVLAGFPASF
AHQREILVLSLALPSLKRGDISRARRLIADRFGDSANDVETVFASRTLFSREFREFRFLMLIYEDHQFSEELLATLFNLI
AEFPGDAHLFRGTFYNSMLEYYIRRREFAKAEQMAQRAMHHYQSAHAPILSFYISLHQAMMALMKGDTIAAGKHAMLSAK
SLSEVPFETLNDMRLQALLEACVDYDGGRAESLARFLNTEIDDFSHGEIWPSLMEFTLLYGSQAMATHFSLLAARGFLDR
WRVYQITNHAFQAMVSIREAIILQNANRWSEAATRLRSIATSIDRDWVLAHPGDVSRLVDRDDIGLLLAWLRQILHEQPD
LPPIETLLAATLSNLSITDRQRMGVNVWLAYIHRRRRDLTKARAILLRVFEDAARLGSIAPLAEEKLFLGELLDNKRISE
FLGASSSARQVIRKLRDSGHLSPVPGIRSELSRRENKILVIVCEGAANKSIAVMLGVSEATVKFHLGNVYRKLGCRTRQE
AISIARATGIVG

Sequences:

>Translated_812_residues
MTSLAVSRASSIANIAPPGARAHRYRINADFPRTAIVHQILGRPEAIVVLEAPAGMGKSVILDQIAGQKKLRVHADANPP
KLQTNRLALWDIPPHAIAGPLPEQLLSGGSRAIIAKRPDTEIPGLPRALAYGAAHVLDREMLLVSAEEGERLFGPKQAKR
IMAVSGGWPLIAFRGDSSGNLSQFLRFEFLADMVDEELVDLKLLAEGAALPPRSSDGLFPIARVGQNRRLQLCAQGLSSH
LSSAVEAVISERLSTPAGANAIAETYAEHARPVDAITTYQQVGFYDKALAEFNRAGGLFFIYFHGTAANDRVLAGFPASF
AHQREILVLSLALPSLKRGDISRARRLIADRFGDSANDVETVFASRTLFSREFREFRFLMLIYEDHQFSEELLATLFNLI
AEFPGDAHLFRGTFYNSMLEYYIRRREFAKAEQMAQRAMHHYQSAHAPILSFYISLHQAMMALMKGDTIAAGKHAMLSAK
SLSEVPFETLNDMRLQALLEACVDYDGGRAESLARFLNTEIDDFSHGEIWPSLMEFTLLYGSQAMATHFSLLAARGFLDR
WRVYQITNHAFQAMVSIREAIILQNANRWSEAATRLRSIATSIDRDWVLAHPGDVSRLVDRDDIGLLLAWLRQILHEQPD
LPPIETLLAATLSNLSITDRQRMGVNVWLAYIHRRRRDLTKARAILLRVFEDAARLGSIAPLAEEKLFLGELLDNKRISE
FLGASSSARQVIRKLRDSGHLSPVPGIRSELSRRENKILVIVCEGAANKSIAVMLGVSEATVKFHLGNVYRKLGCRTRQE
AISIARATGIVG
>Mature_811_residues
TSLAVSRASSIANIAPPGARAHRYRINADFPRTAIVHQILGRPEAIVVLEAPAGMGKSVILDQIAGQKKLRVHADANPPK
LQTNRLALWDIPPHAIAGPLPEQLLSGGSRAIIAKRPDTEIPGLPRALAYGAAHVLDREMLLVSAEEGERLFGPKQAKRI
MAVSGGWPLIAFRGDSSGNLSQFLRFEFLADMVDEELVDLKLLAEGAALPPRSSDGLFPIARVGQNRRLQLCAQGLSSHL
SSAVEAVISERLSTPAGANAIAETYAEHARPVDAITTYQQVGFYDKALAEFNRAGGLFFIYFHGTAANDRVLAGFPASFA
HQREILVLSLALPSLKRGDISRARRLIADRFGDSANDVETVFASRTLFSREFREFRFLMLIYEDHQFSEELLATLFNLIA
EFPGDAHLFRGTFYNSMLEYYIRRREFAKAEQMAQRAMHHYQSAHAPILSFYISLHQAMMALMKGDTIAAGKHAMLSAKS
LSEVPFETLNDMRLQALLEACVDYDGGRAESLARFLNTEIDDFSHGEIWPSLMEFTLLYGSQAMATHFSLLAARGFLDRW
RVYQITNHAFQAMVSIREAIILQNANRWSEAATRLRSIATSIDRDWVLAHPGDVSRLVDRDDIGLLLAWLRQILHEQPDL
PPIETLLAATLSNLSITDRQRMGVNVWLAYIHRRRRDLTKARAILLRVFEDAARLGSIAPLAEEKLFLGELLDNKRISEF
LGASSSARQVIRKLRDSGHLSPVPGIRSELSRRENKILVIVCEGAANKSIAVMLGVSEATVKFHLGNVYRKLGCRTRQEA
ISIARATGIVG

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90031; Mature: 89900

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLAVSRASSIANIAPPGARAHRYRINADFPRTAIVHQILGRPEAIVVLEAPAGMGKSV
CCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHH
ILDQIAGQKKLRVHADANPPKLQTNRLALWDIPPHAIAGPLPEQLLSGGSRAIIAKRPDT
HHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHCCCCHHHHHCCCCEEEEEECCCC
EIPGLPRALAYGAAHVLDREMLLVSAEEGERLFGPKQAKRIMAVSGGWPLIAFRGDSSGN
CCCCCCHHHHHHHHHHHCHHHEEEECCCCCCCCCHHHHCEEEEEECCCEEEEEECCCCCC
LSQFLRFEFLADMVDEELVDLKLLAEGAALPPRSSDGLFPIARVGQNRRLQLCAQGLSSH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
LSSAVEAVISERLSTPAGANAIAETYAEHARPVDAITTYQQVGFYDKALAEFNRAGGLFF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCEEE
IYFHGTAANDRVLAGFPASFAHQREILVLSLALPSLKRGDISRARRLIADRFGDSANDVE
EEEECCCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHH
TVFASRTLFSREFREFRFLMLIYEDHQFSEELLATLFNLIAEFPGDAHLFRGTFYNSMLE
HHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YYIRRREFAKAEQMAQRAMHHYQSAHAPILSFYISLHQAMMALMKGDTIAAGKHAMLSAK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH
SLSEVPFETLNDMRLQALLEACVDYDGGRAESLARFLNTEIDDFSHGEIWPSLMEFTLLY
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
GSQAMATHFSLLAARGFLDRWRVYQITNHAFQAMVSIREAIILQNANRWSEAATRLRSIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TSIDRDWVLAHPGDVSRLVDRDDIGLLLAWLRQILHEQPDLPPIETLLAATLSNLSITDR
HHCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
QRMGVNVWLAYIHRRRRDLTKARAILLRVFEDAARLGSIAPLAEEKLFLGELLDNKRISE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
FLGASSSARQVIRKLRDSGHLSPVPGIRSELSRRENKILVIVCEGAANKSIAVMLGVSEA
HHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCC
TVKFHLGNVYRKLGCRTRQEAISIARATGIVG
EEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSLAVSRASSIANIAPPGARAHRYRINADFPRTAIVHQILGRPEAIVVLEAPAGMGKSV
CCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHH
ILDQIAGQKKLRVHADANPPKLQTNRLALWDIPPHAIAGPLPEQLLSGGSRAIIAKRPDT
HHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHCCCCHHHHHCCCCEEEEEECCCC
EIPGLPRALAYGAAHVLDREMLLVSAEEGERLFGPKQAKRIMAVSGGWPLIAFRGDSSGN
CCCCCCHHHHHHHHHHHCHHHEEEECCCCCCCCCHHHHCEEEEEECCCEEEEEECCCCCC
LSQFLRFEFLADMVDEELVDLKLLAEGAALPPRSSDGLFPIARVGQNRRLQLCAQGLSSH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
LSSAVEAVISERLSTPAGANAIAETYAEHARPVDAITTYQQVGFYDKALAEFNRAGGLFF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCEEE
IYFHGTAANDRVLAGFPASFAHQREILVLSLALPSLKRGDISRARRLIADRFGDSANDVE
EEEECCCCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHH
TVFASRTLFSREFREFRFLMLIYEDHQFSEELLATLFNLIAEFPGDAHLFRGTFYNSMLE
HHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YYIRRREFAKAEQMAQRAMHHYQSAHAPILSFYISLHQAMMALMKGDTIAAGKHAMLSAK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH
SLSEVPFETLNDMRLQALLEACVDYDGGRAESLARFLNTEIDDFSHGEIWPSLMEFTLLY
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
GSQAMATHFSLLAARGFLDRWRVYQITNHAFQAMVSIREAIILQNANRWSEAATRLRSIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TSIDRDWVLAHPGDVSRLVDRDDIGLLLAWLRQILHEQPDLPPIETLLAATLSNLSITDR
HHCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
QRMGVNVWLAYIHRRRRDLTKARAILLRVFEDAARLGSIAPLAEEKLFLGELLDNKRISE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
FLGASSSARQVIRKLRDSGHLSPVPGIRSELSRRENKILVIVCEGAANKSIAVMLGVSEA
HHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCC
TVKFHLGNVYRKLGCRTRQEAISIARATGIVG
EEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA