Click here to switch to the map view.

The map label for this gene is codA [H]

Identifier: 161621451

GI number: 161621451

Start: 1090044

End: 1091345

Strand: Reverse

Name: codA [H]

Synonym: mll1290

Alternate gene names: 161621451

Gene position: 1091345-1090044 (Counterclockwise)

Preceding gene: 13471349

Following gene: 13471347

Centisome position: 15.51

GC content: 64.44

Gene sequence:

>1302_bases
TTGATTCCGGACTCAGCTTCATACCGGCTCACCAACGCCCGCCTTCACGCCTCGCTGACGCCGGGGCTCACTGCGACCTA
TGACGGCGATGGCTTTGCGCTGGCCGATATCACGGTCACCGACGGCAAGATCGCCGGCATTGCAGTGCATGATCGGGCAG
CGGCGCCACCCGGTGCCGTCGATCTTGCCGGCCGCATCGTTCTGCCGTGCTTTGTCGACTGCCACACCCATATCGACAAG
GGCCATATCTGGCCGCGGAAGCCCAATCCCGACGGCACCTTCATGGGCGCGCTCAATGCCGCCGGCGCCGACCGCGTCGC
GCGCTGGAGCGCCGAGGATCTCGCCAAACGCATGGATTTCTCGCTGCGCTCGGCCTATGCGCATGGCACCAGGGCGCTGC
GCACCCATCTCGACAGCGTCGCGCCGCAGGAGGACATCTCCTGGCCGGTGTTCGAGACGATGCGCGAGGCCTGGCGCGGC
CGCATCGAGTTGCAGGGCGCCTGCCTGCTCGGCATCGAAGGCGTGCGCGACAAGAAATGGTTCGACAGGCTGGCGAAACG
GGTCGCCGCCGCCAAGGGCGTGCTCGGCGTCGTCACCTATATGGTGCCGGATCTGGAAGAACTGCTCGATCATGTCTTCG
CGCAAGCGATCAAGCATGGGCTCGATCTCGATTTCCATGCCGACGAGACCGATGACATTGCGGCGATCTCGCTGAAGAAG
ATCGCCGAGGCAGCACTATGGAACGGTTTCGAGGGCAAGATCCTCGTCGGCCATTGCTGTTCGCTGGCGCGGCAGCCCGA
TCTCGAGGTGCTGGACACACTGGACAAGGTGGCGAAGGCCGGGCTGGCGGTGGTGTCGCTGCCGATGTGCAATCTCTACC
TGCAGGATCGGCGCGCGAACCAGACCACGCCGCGTTGGCGTGGCGTGACGCTGCTGCACGAGATGAAGGCGAGGGGCATT
CCTGTCGCCGTGGCTTCCGACAACACACGCGATCCCTTCTATGCCTATGGCGATCTCGACATGCTGGAGGTCTATCGCAT
GGCGACGCGCATCCTGCATTTCGATCATCCGGTCGCCGACTGGCCGCTAGCGGTCACCGCGACGCCGGCCAAGGTGATGC
GGCTTGATGGGCTTGGCACGCTTGCCGCCGGCGGCGATGCCGATTTCATCCTGTTCAAAGCTCGAAGCTGGACGGAATTG
CTGTCGCGGCCCGAATCCGATCGCATCGTCGTGCGCGGCGGCCGCGCGATCGAGCGGCAATTGCCCGACTATTCCGAACT
CGACGGACTGATGGTGGAATGA

Upstream 100 bases:

>100_bases
TCGCTGACCGGCATCCTGATCTTCCTCGTGCTGTCGCTGATTTCGCATCTTATTCTCAGGCGCTGGCACGAAAGCGCGCT
GAAGCAGGAGCGGTAGTGCC

Downstream 100 bases:

>100_bases
TGGACGTTTCGGCGCTCAAACGCGATCTCGACGGGATAAAGCTCGACGACAATCCGGCCATCGTCCAGCAGAAGAGCCGC
GATTTCTACTGGTACAGCCC

Product: cytosine deaminase-like protein

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MIPDSASYRLTNARLHASLTPGLTATYDGDGFALADITVTDGKIAGIAVHDRAAAPPGAVDLAGRIVLPCFVDCHTHIDK
GHIWPRKPNPDGTFMGALNAAGADRVARWSAEDLAKRMDFSLRSAYAHGTRALRTHLDSVAPQEDISWPVFETMREAWRG
RIELQGACLLGIEGVRDKKWFDRLAKRVAAAKGVLGVVTYMVPDLEELLDHVFAQAIKHGLDLDFHADETDDIAAISLKK
IAEAALWNGFEGKILVGHCCSLARQPDLEVLDTLDKVAKAGLAVVSLPMCNLYLQDRRANQTTPRWRGVTLLHEMKARGI
PVAVASDNTRDPFYAYGDLDMLEVYRMATRILHFDHPVADWPLAVTATPAKVMRLDGLGTLAAGGDADFILFKARSWTEL
LSRPESDRIVVRGGRAIERQLPDYSELDGLMVE

Sequences:

>Translated_433_residues
MIPDSASYRLTNARLHASLTPGLTATYDGDGFALADITVTDGKIAGIAVHDRAAAPPGAVDLAGRIVLPCFVDCHTHIDK
GHIWPRKPNPDGTFMGALNAAGADRVARWSAEDLAKRMDFSLRSAYAHGTRALRTHLDSVAPQEDISWPVFETMREAWRG
RIELQGACLLGIEGVRDKKWFDRLAKRVAAAKGVLGVVTYMVPDLEELLDHVFAQAIKHGLDLDFHADETDDIAAISLKK
IAEAALWNGFEGKILVGHCCSLARQPDLEVLDTLDKVAKAGLAVVSLPMCNLYLQDRRANQTTPRWRGVTLLHEMKARGI
PVAVASDNTRDPFYAYGDLDMLEVYRMATRILHFDHPVADWPLAVTATPAKVMRLDGLGTLAAGGDADFILFKARSWTEL
LSRPESDRIVVRGGRAIERQLPDYSELDGLMVE
>Mature_433_residues
MIPDSASYRLTNARLHASLTPGLTATYDGDGFALADITVTDGKIAGIAVHDRAAAPPGAVDLAGRIVLPCFVDCHTHIDK
GHIWPRKPNPDGTFMGALNAAGADRVARWSAEDLAKRMDFSLRSAYAHGTRALRTHLDSVAPQEDISWPVFETMREAWRG
RIELQGACLLGIEGVRDKKWFDRLAKRVAAAKGVLGVVTYMVPDLEELLDHVFAQAIKHGLDLDFHADETDDIAAISLKK
IAEAALWNGFEGKILVGHCCSLARQPDLEVLDTLDKVAKAGLAVVSLPMCNLYLQDRRANQTTPRWRGVTLLHEMKARGI
PVAVASDNTRDPFYAYGDLDMLEVYRMATRILHFDHPVADWPLAVTATPAKVMRLDGLGTLAAGGDADFILFKARSWTEL
LSRPESDRIVVRGGRAIERQLPDYSELDGLMVE

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=402, Percent_Identity=26.6169154228856, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 47505; Mature: 47505

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDSASYRLTNARLHASLTPGLTATYDGDGFALADITVTDGKIAGIAVHDRAAAPPGAV
CCCCCCCEEEECEEEEEEECCCCEEEECCCCEEEEEEEEECCEEEEEEEECCCCCCCCCH
DLAGRIVLPCFVDCHTHIDKGHIWPRKPNPDGTFMGALNAAGADRVARWSAEDLAKRMDF
HHCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCHHHHHHHHCH
SLRSAYAHGTRALRTHLDSVAPQEDISWPVFETMREAWRGRIELQGACLLGIEGVRDKKW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEECCEEEEECCCCCCHHH
FDRLAKRVAAAKGVLGVVTYMVPDLEELLDHVFAQAIKHGLDLDFHADETDDIAAISLKK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHH
IAEAALWNGFEGKILVGHCCSLARQPDLEVLDTLDKVAKAGLAVVSLPMCNLYLQDRRAN
HHHHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCC
QTTPRWRGVTLLHEMKARGIPVAVASDNTRDPFYAYGDLDMLEVYRMATRILHFDHPVAD
CCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCC
WPLAVTATPAKVMRLDGLGTLAAGGDADFILFKARSWTELLSRPESDRIVVRGGRAIERQ
CCEEEEECCHHHEEECCCEEEECCCCCCEEEEECCCHHHHHCCCCCCEEEEECCCHHHHH
LPDYSELDGLMVE
CCCHHHCCCEECC
>Mature Secondary Structure
MIPDSASYRLTNARLHASLTPGLTATYDGDGFALADITVTDGKIAGIAVHDRAAAPPGAV
CCCCCCCEEEECEEEEEEECCCCEEEECCCCEEEEEEEEECCEEEEEEEECCCCCCCCCH
DLAGRIVLPCFVDCHTHIDKGHIWPRKPNPDGTFMGALNAAGADRVARWSAEDLAKRMDF
HHCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCHHHHHHHHCH
SLRSAYAHGTRALRTHLDSVAPQEDISWPVFETMREAWRGRIELQGACLLGIEGVRDKKW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEECCEEEEECCCCCCHHH
FDRLAKRVAAAKGVLGVVTYMVPDLEELLDHVFAQAIKHGLDLDFHADETDDIAAISLKK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHH
IAEAALWNGFEGKILVGHCCSLARQPDLEVLDTLDKVAKAGLAVVSLPMCNLYLQDRRAN
HHHHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCC
QTTPRWRGVTLLHEMKARGIPVAVASDNTRDPFYAYGDLDMLEVYRMATRILHFDHPVAD
CCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCC
WPLAVTATPAKVMRLDGLGTLAAGGDADFILFKARSWTELLSRPESDRIVVRGGRAIERQ
CCEEEEECCHHHEEECCCEEEECCCCCCEEEEECCCHHHHHCCCCCCEEEEECCCHHHHH
LPDYSELDGLMVE
CCCHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]