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The map label for this gene is glcD [H]

Identifier: 13471347

GI number: 13471347

Start: 1088641

End: 1090044

Strand: Reverse

Name: glcD [H]

Synonym: mll1289

Alternate gene names: 13471347

Gene position: 1090044-1088641 (Counterclockwise)

Preceding gene: 161621451

Following gene: 13471346

Centisome position: 15.49

GC content: 62.82

Gene sequence:

>1404_bases
ATGGACGTTTCGGCGCTCAAACGCGATCTCGACGGGATAAAGCTCGACGACAATCCGGCCATCGTCCAGCAGAAGAGCCG
CGATTTCTACTGGTACAGCCCGGTGCTGAAACAACAACTCGACCATGTCACCGGCGACCTGATCGTGACGCCGAAGACCG
AGGCCGAGTTGATCCGCGTGCTCGCCGCCTGTCACCGGCATGGCGTGCCGGTGACGCCGCGCGGCAGCGGCACGGGCAAT
TACGGCCAGGCGATGCCCTTGTCGGGCGGCGTGGTGCTGAACCTTGCCGAGATGAACGAGATCAAGTCGATCGCGCCGGG
GCGCGTGGTGACCGGGCCTGGTGCTATTCTGGCCGATATCGACAAGGCAACACGTGCGCATTCCGGGCAGGAGCTTCGGC
TGTCGCCCTCGACCTACAACACCGCCTCGATCGGCGGCTTCATCGCCGGCGGCTCGGGCGGCGTCGGTTCGATCAATTTC
GGCGGGTTGCGCGATTTCGGCAATGTGCTGCGCCTGCGCGTGGTGACGATGGAGGCCGAGCCGAAGGCGCTCGAACTCAC
CGGCGAGGATTTGCACAAGGTGACCCACGCCTACGGCACCAACGGCATCATCACCGAAGTCGAGATGCCGCTGACGGCGG
CCTATGACTGGGTTGACGTCATTGTCGGCTTCGGTGCCTTCATGGACGCGGCACGCTACGGCAATGCGCTGGCCTGCCAG
GACGGCATCCTGACCAAGCTGATCACGCCGATCGCCGCGCCTGTGCCGCAGCTCTATTTCAAGCGCCACCAGAAGTTTTT
CAGGGAGGGGCAAAGCATCTGCGTCGTCATGGTGGCGCAGCACGGGCTGGATGCTTTCTTCGCCTTCACCCGGCGCGCCG
GCGGCGAGGTGATCTTCAACGCCGCCACCGCGACGCCCGAGGAGAAGAAAGGCCTGCCGCCGGCCTATGAGCTGGCCTGG
AACCACACGACGCTGAGGGCGCTGCGCGTCGATCCCGACATCACCTATCTGCAGTCGCTCTATCCCTTTCCCAACCAGCT
GGCGCTGGTCGAGAAAATGGATGCGATGTTTCCCGGCGAAGTGTTCTCGCATCTCGAATTCGTGCGGCTGGACGGCAACA
TCACCTGTTTCGGCCTGCCGCTGGTAAAATTCACCACCGAGGCGCGGCTTGACGAGATCGTGCGCCTGCATGAGGAAAAT
GGCTGCCCGATCTTCAACCCGCATCGCTACACGCTGGAGGAGGGTGGCATGAAGCAGACGGATGCCGTGCAACTCGCCTT
CAAGCGCGAGACCGACCCGCAAGGCCTGCTCAATCCCGGCAAGATGATCGCCTGGGAAAATCCGGACTATGACTATCGTT
CCGGCCGGACTTTTTTGTTCAAGGGGCTGCAAAAGGCAGGCTGA

Upstream 100 bases:

>100_bases
TGTCGCGGCCCGAATCCGATCGCATCGTCGTGCGCGGCGGCCGCGCGATCGAGCGGCAATTGCCCGACTATTCCGAACTC
GACGGACTGATGGTGGAATG

Downstream 100 bases:

>100_bases
TGAACATCCTCGTCCTCTACGCCCATCCGGTCGAGACCAGCTTCAATGCCGGCCTGCACCGGTTGATCGTCGAGCGGCTG
ACCGCAGCGGGCCATACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MDVSALKRDLDGIKLDDNPAIVQQKSRDFYWYSPVLKQQLDHVTGDLIVTPKTEAELIRVLAACHRHGVPVTPRGSGTGN
YGQAMPLSGGVVLNLAEMNEIKSIAPGRVVTGPGAILADIDKATRAHSGQELRLSPSTYNTASIGGFIAGGSGGVGSINF
GGLRDFGNVLRLRVVTMEAEPKALELTGEDLHKVTHAYGTNGIITEVEMPLTAAYDWVDVIVGFGAFMDAARYGNALACQ
DGILTKLITPIAAPVPQLYFKRHQKFFREGQSICVVMVAQHGLDAFFAFTRRAGGEVIFNAATATPEEKKGLPPAYELAW
NHTTLRALRVDPDITYLQSLYPFPNQLALVEKMDAMFPGEVFSHLEFVRLDGNITCFGLPLVKFTTEARLDEIVRLHEEN
GCPIFNPHRYTLEEGGMKQTDAVQLAFKRETDPQGLLNPGKMIAWENPDYDYRSGRTFLFKGLQKAG

Sequences:

>Translated_467_residues
MDVSALKRDLDGIKLDDNPAIVQQKSRDFYWYSPVLKQQLDHVTGDLIVTPKTEAELIRVLAACHRHGVPVTPRGSGTGN
YGQAMPLSGGVVLNLAEMNEIKSIAPGRVVTGPGAILADIDKATRAHSGQELRLSPSTYNTASIGGFIAGGSGGVGSINF
GGLRDFGNVLRLRVVTMEAEPKALELTGEDLHKVTHAYGTNGIITEVEMPLTAAYDWVDVIVGFGAFMDAARYGNALACQ
DGILTKLITPIAAPVPQLYFKRHQKFFREGQSICVVMVAQHGLDAFFAFTRRAGGEVIFNAATATPEEKKGLPPAYELAW
NHTTLRALRVDPDITYLQSLYPFPNQLALVEKMDAMFPGEVFSHLEFVRLDGNITCFGLPLVKFTTEARLDEIVRLHEEN
GCPIFNPHRYTLEEGGMKQTDAVQLAFKRETDPQGLLNPGKMIAWENPDYDYRSGRTFLFKGLQKAG
>Mature_467_residues
MDVSALKRDLDGIKLDDNPAIVQQKSRDFYWYSPVLKQQLDHVTGDLIVTPKTEAELIRVLAACHRHGVPVTPRGSGTGN
YGQAMPLSGGVVLNLAEMNEIKSIAPGRVVTGPGAILADIDKATRAHSGQELRLSPSTYNTASIGGFIAGGSGGVGSINF
GGLRDFGNVLRLRVVTMEAEPKALELTGEDLHKVTHAYGTNGIITEVEMPLTAAYDWVDVIVGFGAFMDAARYGNALACQ
DGILTKLITPIAAPVPQLYFKRHQKFFREGQSICVVMVAQHGLDAFFAFTRRAGGEVIFNAATATPEEKKGLPPAYELAW
NHTTLRALRVDPDITYLQSLYPFPNQLALVEKMDAMFPGEVFSHLEFVRLDGNITCFGLPLVKFTTEARLDEIVRLHEEN
GCPIFNPHRYTLEEGGMKQTDAVQLAFKRETDPQGLLNPGKMIAWENPDYDYRSGRTFLFKGLQKAG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=509, Percent_Identity=24.950884086444, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI37595754, Length=135, Percent_Identity=36.2962962962963, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789351, Length=428, Percent_Identity=27.3364485981308, Blast_Score=82, Evalue=5e-17,
Organism=Drosophila melanogaster, GI18921117, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24639277, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24639275, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51152; Mature: 51152

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSALKRDLDGIKLDDNPAIVQQKSRDFYWYSPVLKQQLDHVTGDLIVTPKTEAELIRV
CCHHHHHHCCCCCEECCCCHHHEECCCCEEEECHHHHHHHHHCCCCEEECCCCHHHHHHH
LAACHRHGVPVTPRGSGTGNYGQAMPLSGGVVLNLAEMNEIKSIAPGRVVTGPGAILADI
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEECCCHHEEHH
DKATRAHSGQELRLSPSTYNTASIGGFIAGGSGGVGSINFGGLRDFGNVLRLRVVTMEAE
HHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHEEEEEEEEEECC
PKALELTGEDLHKVTHAYGTNGIITEVEMPLTAAYDWVDVIVGFGAFMDAARYGNALACQ
CCEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
DGILTKLITPIAAPVPQLYFKRHQKFFREGQSICVVMVAQHGLDAFFAFTRRAGGEVIFN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEE
AATATPEEKKGLPPAYELAWNHTTLRALRVDPDITYLQSLYPFPNQLALVEKMDAMFPGE
ECCCCCHHHCCCCCHHHEEECCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCHH
VFSHLEFVRLDGNITCFGLPLVKFTTEARLDEIVRLHEENGCPIFNPHRYTLEEGGMKQT
HHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC
DAVQLAFKRETDPQGLLNPGKMIAWENPDYDYRSGRTFLFKGLQKAG
CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDVSALKRDLDGIKLDDNPAIVQQKSRDFYWYSPVLKQQLDHVTGDLIVTPKTEAELIRV
CCHHHHHHCCCCCEECCCCHHHEECCCCEEEECHHHHHHHHHCCCCEEECCCCHHHHHHH
LAACHRHGVPVTPRGSGTGNYGQAMPLSGGVVLNLAEMNEIKSIAPGRVVTGPGAILADI
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCEEECCCHHEEHH
DKATRAHSGQELRLSPSTYNTASIGGFIAGGSGGVGSINFGGLRDFGNVLRLRVVTMEAE
HHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHEEEEEEEEEECC
PKALELTGEDLHKVTHAYGTNGIITEVEMPLTAAYDWVDVIVGFGAFMDAARYGNALACQ
CCEEEECCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
DGILTKLITPIAAPVPQLYFKRHQKFFREGQSICVVMVAQHGLDAFFAFTRRAGGEVIFN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEE
AATATPEEKKGLPPAYELAWNHTTLRALRVDPDITYLQSLYPFPNQLALVEKMDAMFPGE
ECCCCCHHHCCCCCHHHEEECCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCHH
VFSHLEFVRLDGNITCFGLPLVKFTTEARLDEIVRLHEENGCPIFNPHRYTLEEGGMKQT
HHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC
DAVQLAFKRETDPQGLLNPGKMIAWENPDYDYRSGRTFLFKGLQKAG
CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]