| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476711
Identifier: 13476711
GI number: 13476711
Start: 6670357
End: 6670914
Strand: Direct
Name: 13476711
Synonym: mlr8105
Alternate gene names: NA
Gene position: 6670357-6670914 (Clockwise)
Preceding gene: 13476710
Following gene: 13476713
Centisome position: 94.8
GC content: 56.27
Gene sequence:
>558_bases GTGGCGCGGCTAGCCGGTCTAAGTTCGGTCTTTTGGGGGAGCCGGGCAATGAAACGGGCCATTGCTTTCTGCCTGTTGAT CGTCACCTGCTTCGCGGGAACAGCCAAGGCTACCGTCATTCTCGAGAACTGGACACCTGAGCTTGAAGGGCTTGTCAGGG GCATCACGGGCCAGATCGAGGAAATGCCGTTCATCAGAGCATGGGCTTACGCGGAAGCGATTGACCGATATTGCTTCCCT GCAAAGTCGTACGCCAATGTTGTCGGCGTCACCTTGAAGGAGACCGCTCGCCATCAGGATAGTTTTAGCCCAGGAATCCT AGCAAGCGCTGAACGTGATGCGGCAGATCATCTGCGAGGCGAGTATCTGGCTTGCGCCCCCGCGATGAAGTTCGTTGAGG AAACGGTCGCTCGAATGCCCGAGCTTGTTGAGAAGCTCAACGTACTGCAGATGCAAATCAACGACGTCAAGGCCAAGATC GCTACGGCTTGCGCAATAAGAGCTCGGGAAGGATCCCCACCCCTTAAGTTATGCATCGGCGGCTACTTGCCCGATTGA
Upstream 100 bases:
>100_bases CCTGGCCTTGCAATGCATGCGGCTGGCCACAGGCGGGCGCCAGGACGCGCGGCAAGAGTTGGCGGCGTAGGACAGCGGCC GGCCGGAAAGGCGCGCTGGC
Downstream 100 bases:
>100_bases TGCGGCCCGCAGCAAGCCGCGCTTACGCTTAGAGCGGCGGCCAGCCGAAACGCGCGCTGGTGGGCTTCTTGGCCTGCTAT TTGATGCTGGGGGCAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MARLAGLSSVFWGSRAMKRAIAFCLLIVTCFAGTAKATVILENWTPELEGLVRGITGQIEEMPFIRAWAYAEAIDRYCFP AKSYANVVGVTLKETARHQDSFSPGILASAERDAADHLRGEYLACAPAMKFVEETVARMPELVEKLNVLQMQINDVKAKI ATACAIRAREGSPPLKLCIGGYLPD
Sequences:
>Translated_185_residues MARLAGLSSVFWGSRAMKRAIAFCLLIVTCFAGTAKATVILENWTPELEGLVRGITGQIEEMPFIRAWAYAEAIDRYCFP AKSYANVVGVTLKETARHQDSFSPGILASAERDAADHLRGEYLACAPAMKFVEETVARMPELVEKLNVLQMQINDVKAKI ATACAIRAREGSPPLKLCIGGYLPD >Mature_184_residues ARLAGLSSVFWGSRAMKRAIAFCLLIVTCFAGTAKATVILENWTPELEGLVRGITGQIEEMPFIRAWAYAEAIDRYCFPA KSYANVVGVTLKETARHQDSFSPGILASAERDAADHLRGEYLACAPAMKFVEETVARMPELVEKLNVLQMQINDVKAKIA TACAIRAREGSPPLKLCIGGYLPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20225; Mature: 20094
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLAGLSSVFWGSRAMKRAIAFCLLIVTCFAGTAKATVILENWTPELEGLVRGITGQIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHH EMPFIRAWAYAEAIDRYCFPAKSYANVVGVTLKETARHQDSFSPGILASAERDAADHLRG HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC EYLACAPAMKFVEETVARMPELVEKLNVLQMQINDVKAKIATACAIRAREGSPPLKLCIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC GYLPD CCCCC >Mature Secondary Structure ARLAGLSSVFWGSRAMKRAIAFCLLIVTCFAGTAKATVILENWTPELEGLVRGITGQIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCHHH EMPFIRAWAYAEAIDRYCFPAKSYANVVGVTLKETARHQDSFSPGILASAERDAADHLRG HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC EYLACAPAMKFVEETVARMPELVEKLNVLQMQINDVKAKIATACAIRAREGSPPLKLCIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC GYLPD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA