| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476710
Identifier: 13476710
GI number: 13476710
Start: 6670072
End: 6670326
Strand: Direct
Name: 13476710
Synonym: msr8103
Alternate gene names: NA
Gene position: 6670072-6670326 (Clockwise)
Preceding gene: 13476709
Following gene: 13476711
Centisome position: 94.8
GC content: 65.49
Gene sequence:
>255_bases ATGTCGCCGAGCAATGTCGTGCCGCTGGCAGAACCGGCGCCGGCCGACACTCGAGCAATTCCCCGTGGCCACCTATTCGT TGACCAGAAGCTCGCTGTCGGCCGCTGGCTGCTCAAGGTCAAGGCACGGTTGCCGCATGGCCATTTCGGGCCATGGATTG AGACGCAGAAGGGCTTATGCCGCAGCCTGGCCTTGCAATGCATGCGGCTGGCCACAGGCGGGCGCCAGGACGCGCGGCAA GAGTTGGCGGCGTAG
Upstream 100 bases:
>100_bases GGGCTCGCGCTGCCCTTGCTTGATCTGCTGAGAGGAGGTGTCGGCTGTCCATAGGCACGGAACATTCAACACGGCTAAAA TGTTCCCCTGACTCGCCCTT
Downstream 100 bases:
>100_bases GACAGCGGCCGGCCGGAAAGGCGCGCTGGCGTGGCGCGGCTAGCCGGTCTAAGTTCGGTCTTTTGGGGGAGCCGGGCAAT GAAACGGGCCATTGCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSPSNVVPLAEPAPADTRAIPRGHLFVDQKLAVGRWLLKVKARLPHGHFGPWIETQKGLCRSLALQCMRLATGGRQDARQ ELAA
Sequences:
>Translated_84_residues MSPSNVVPLAEPAPADTRAIPRGHLFVDQKLAVGRWLLKVKARLPHGHFGPWIETQKGLCRSLALQCMRLATGGRQDARQ ELAA >Mature_83_residues SPSNVVPLAEPAPADTRAIPRGHLFVDQKLAVGRWLLKVKARLPHGHFGPWIETQKGLCRSLALQCMRLATGGRQDARQE LAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9207; Mature: 9076
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSNVVPLAEPAPADTRAIPRGHLFVDQKLAVGRWLLKVKARLPHGHFGPWIETQKGLC CCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RSLALQCMRLATGGRQDARQELAA HHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure SPSNVVPLAEPAPADTRAIPRGHLFVDQKLAVGRWLLKVKARLPHGHFGPWIETQKGLC CCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RSLALQCMRLATGGRQDARQELAA HHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA