| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476612
Identifier: 13476612
GI number: 13476612
Start: 6583637
End: 6584074
Strand: Direct
Name: 13476612
Synonym: mlr7987
Alternate gene names: NA
Gene position: 6583637-6584074 (Clockwise)
Preceding gene: 13476611
Following gene: 13476613
Centisome position: 93.57
GC content: 62.79
Gene sequence:
>438_bases ATGTTGTTCGATCCTCTTTGGAGCCGCCACCAGGCGGGCTCTCTGCTCTTCCGCGAAGTCGACCCGATGTCGACGCCCCG GCTGGCTGGACTTCAATCCAGCATGGGGCACCACAGAATGTCTTCGACCTTCGACCACAAAACTTTGCGGCTCGACATGG ACGGCTTTTGCCGGTTCGCGCGGCGAGCGTTTCCGACGTCGACAGCGGCACATCTCGCCAGCGTCGTCGGCGCCACAATG TCGACGGCAGAGAAATGGCTCAGCGGCCACACACGACCATCGGGCGAGCATCTTGCGGCGATGATTTCCGCCTTCGGCCC GGCCTTCCTTGCCGAAGCAGTTCCATCAACCCGCCAGTGGGCCGCGCCGATCATCGAGCGCGCCAGGCTGGCTGAAATCT CACGGCAGCTTTCCGAGATCCTGGAGGCTGCGGAATGA
Upstream 100 bases:
>100_bases CCTCGTTGCTACCCGCGCGTCCAGTTCTTCCAGGAGCCTACGCGCGGCCTGACCAATCGTCTCGAACTCACTGTTTGTAT CGTGTCTGTGGGGCCTTTCC
Downstream 100 bases:
>100_bases TCCGAAGGAGTTTGCAATGCCAGCGTTCCAGCATTGCTCCCGGTACTTTGCCGCGAGGCCGAAGTGAGCGGCTATACCCA ATCTGAAATCGACAGCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLFDPLWSRHQAGSLLFREVDPMSTPRLAGLQSSMGHHRMSSTFDHKTLRLDMDGFCRFARRAFPTSTAAHLASVVGATM STAEKWLSGHTRPSGEHLAAMISAFGPAFLAEAVPSTRQWAAPIIERARLAEISRQLSEILEAAE
Sequences:
>Translated_145_residues MLFDPLWSRHQAGSLLFREVDPMSTPRLAGLQSSMGHHRMSSTFDHKTLRLDMDGFCRFARRAFPTSTAAHLASVVGATM STAEKWLSGHTRPSGEHLAAMISAFGPAFLAEAVPSTRQWAAPIIERARLAEISRQLSEILEAAE >Mature_145_residues MLFDPLWSRHQAGSLLFREVDPMSTPRLAGLQSSMGHHRMSSTFDHKTLRLDMDGFCRFARRAFPTSTAAHLASVVGATM STAEKWLSGHTRPSGEHLAAMISAFGPAFLAEAVPSTRQWAAPIIERARLAEISRQLSEILEAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15961; Mature: 15961
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDPLWSRHQAGSLLFREVDPMSTPRLAGLQSSMGHHRMSSTFDHKTLRLDMDGFCRFA CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEECHHHHHHHH RRAFPTSTAAHLASVVGATMSTAEKWLSGHTRPSGEHLAAMISAFGPAFLAEAVPSTRQW HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH AAPIIERARLAEISRQLSEILEAAE HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFDPLWSRHQAGSLLFREVDPMSTPRLAGLQSSMGHHRMSSTFDHKTLRLDMDGFCRFA CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEECHHHHHHHH RRAFPTSTAAHLASVVGATMSTAEKWLSGHTRPSGEHLAAMISAFGPAFLAEAVPSTRQW HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH AAPIIERARLAEISRQLSEILEAAE HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA