| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476613
Identifier: 13476613
GI number: 13476613
Start: 6584138
End: 6584863
Strand: Direct
Name: 13476613
Synonym: mlr7988
Alternate gene names: NA
Gene position: 6584138-6584863 (Clockwise)
Preceding gene: 13476612
Following gene: 13476614
Centisome position: 93.58
GC content: 62.4
Gene sequence:
>726_bases GTGAGCGGCTATACCCAATCTGAAATCGACAGCATTGCCGGCTGGCTAAGGGCAGGGGATTCCGCGTCGAAAGCCGCCGC CAAGCTGTCAACCATGCGGGGCCGTGCGGTCTCACGCAATGCCATCATCGGCATCGTTCACCGCAACGCCAAGCTCGCTG CAATCGGTTTCGGCCGCGCCAAATCATCGCCTGCATCCGAAGGGAGCAGCACTTACACGCCCGAGGAAATCAAGCTGGTC GCCGACTGCCTGAAGGCGAAGAGAAACTACGTCCAGATTGCCCAGCGGCTTGCCCTTAAGAGCGGGCGGATCATCTCTCG TTTTGGGGTGAAAAGCCTGATCCGGCGCACCCCCGAACTCAACGAGATCGGCTTTAGAGGCAAGAAGGGCAGGCCGAGCG ACAAGAAGAAGGCGGCGCCTGGCCAACTGCCCGGCAGGCTGTTTATCGCGGCAACGGCAGACATCGATCGTGATCCGAGC GCATTCGATTATCTCACGCGGCCGGCTGTGCGTGCTTTGGCGTCGCAGCCGCACTTCGCGGCGATGCGGTTCGTTGACTG CCTTCCGGCCCGCTGCCGGGCTCCGCTCAGCTATGACCTCGAGGAGCGGCCCGGTCCCGACATGCTGTGTTGCGGCCATC TCGCTATGCCGTCGCGCTCATACTGCGCCTACCACGAAATCAGGCTGACCGCTCGCAAGGCCGAGTTCATTGCGGAGGCG GCATGA
Upstream 100 bases:
>100_bases ACGGCAGCTTTCCGAGATCCTGGAGGCTGCGGAATGATCCGAAGGAGTTTGCAATGCCAGCGTTCCAGCATTGCTCCCGG TACTTTGCCGCGAGGCCGAA
Downstream 100 bases:
>100_bases TCTCCGCCGGCCAGCCCATCACCTACGACGTCAAGCTTTCGACGGTGCGCGCACTCATCGCCGGAAAGCAGGATTGGCTT TCTCGGTTCGCATTTGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSGYTQSEIDSIAGWLRAGDSASKAAAKLSTMRGRAVSRNAIIGIVHRNAKLAAIGFGRAKSSPASEGSSTYTPEEIKLV ADCLKAKRNYVQIAQRLALKSGRIISRFGVKSLIRRTPELNEIGFRGKKGRPSDKKKAAPGQLPGRLFIAATADIDRDPS AFDYLTRPAVRALASQPHFAAMRFVDCLPARCRAPLSYDLEERPGPDMLCCGHLAMPSRSYCAYHEIRLTARKAEFIAEA A
Sequences:
>Translated_241_residues MSGYTQSEIDSIAGWLRAGDSASKAAAKLSTMRGRAVSRNAIIGIVHRNAKLAAIGFGRAKSSPASEGSSTYTPEEIKLV ADCLKAKRNYVQIAQRLALKSGRIISRFGVKSLIRRTPELNEIGFRGKKGRPSDKKKAAPGQLPGRLFIAATADIDRDPS AFDYLTRPAVRALASQPHFAAMRFVDCLPARCRAPLSYDLEERPGPDMLCCGHLAMPSRSYCAYHEIRLTARKAEFIAEA A >Mature_240_residues SGYTQSEIDSIAGWLRAGDSASKAAAKLSTMRGRAVSRNAIIGIVHRNAKLAAIGFGRAKSSPASEGSSTYTPEEIKLVA DCLKAKRNYVQIAQRLALKSGRIISRFGVKSLIRRTPELNEIGFRGKKGRPSDKKKAAPGQLPGRLFIAATADIDRDPSA FDYLTRPAVRALASQPHFAAMRFVDCLPARCRAPLSYDLEERPGPDMLCCGHLAMPSRSYCAYHEIRLTARKAEFIAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26210; Mature: 26078
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYTQSEIDSIAGWLRAGDSASKAAAKLSTMRGRAVSRNAIIGIVHRNAKLAAIGFGRA CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCC KSSPASEGSSTYTPEEIKLVADCLKAKRNYVQIAQRLALKSGRIISRFGVKSLIRRTPEL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC NEIGFRGKKGRPSDKKKAAPGQLPGRLFIAATADIDRDPSAFDYLTRPAVRALASQPHFA HHCCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHH AMRFVDCLPARCRAPLSYDLEERPGPDMLCCGHLAMPSRSYCAYHEIRLTARKAEFIAEA HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure SGYTQSEIDSIAGWLRAGDSASKAAAKLSTMRGRAVSRNAIIGIVHRNAKLAAIGFGRA CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCC KSSPASEGSSTYTPEEIKLVADCLKAKRNYVQIAQRLALKSGRIISRFGVKSLIRRTPEL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC NEIGFRGKKGRPSDKKKAAPGQLPGRLFIAATADIDRDPSAFDYLTRPAVRALASQPHFA HHCCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHH AMRFVDCLPARCRAPLSYDLEERPGPDMLCCGHLAMPSRSYCAYHEIRLTARKAEFIAEA HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA