| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yfgE [C]
Identifier: 13476596
GI number: 13476596
Start: 6571232
End: 6571936
Strand: Direct
Name: yfgE [C]
Synonym: mlr7968
Alternate gene names: 13476596
Gene position: 6571232-6571936 (Clockwise)
Preceding gene: 13476595
Following gene: 13476599
Centisome position: 93.39
GC content: 70.07
Gene sequence:
>705_bases GTGACCGCCCAGCGAACCGATCCGCCGCGCCAGCTGCCGCTCGATCTCGGCCACGGCACCGGCTATTCGCGCGACGAACT CGTCGTCTCCGGCACCAACAACCAGGCGGCGGCGCTGGTCGACCGCTGGCCGGACTGGCCCTCGCCGGTGGTGGTGCTGG CAGGTCCCGCCGGTTCCGGCAAGACGCATCTGGCCGCCATCTGGCGTGCGCGCGCCAACGCGGTTGCCGTCGACGCACGG CGCATCGGCGACAGCATCGCCGGTCTCGGCGCCCGGCCGGCGCTGATCGACGATGTCGATGCCGGCGCGGTCGACGAACA AGGCCTGTTCCATCTGATCAATGCGGTGCGCGGCGCAGGCTCGACGTTGCTGTTGACCGCACGGCGTTTTCCCTCGGCCT GGGGCGTATCGCTGCCCGATCTGGCCTCGCGGCTGAAGGCGGCGGCGACGGTCGAGATCCACGAGCCCGACGACCTGCTG CTCGCCGGTGTCATCACCAAGCTGTTCGCCGACCGCCAGGTCGAGGTCGAACCGCATGTCGTGCAATATCTGGTGCGGCG CATCGAGCGCTCGCTGGCGACAGCCATGCGCGTGGTGGAGCGGCTGGACCGCACCGCGCTCGAGCGCAAGATGCCGATCA CCCGGGCGCTCGCCGCCGAAACGGTCAGCGCCATGGATGAGGGGCAGCGCGAGTTCGAGATTTAG
Upstream 100 bases:
>100_bases ATCTCGAATCGCCGCTCTACAAGGGCCACGCGACAGAGCCCGCGCCGCCGCTGCCGGCCGATCGCGGCGGCGGCCACCGC ACCCAACCGCGTCGCTCGAA
Downstream 100 bases:
>100_bases AAAGCCTCGGGCGACCGGCAACAGGGCGTGTCCCATTTTGGGAAAGAACAACTGGCACCCATCTTGCTGCACCAGCTTGC CGGCTAACCCCGGTCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; DNAA-Like Protein; ATPase; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase Involved In DNA Replication Initiation; DNAA Family Protein; Chromosomal Replication Initiator DNAa; DNA Replication Initiation Factor; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDAR RIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLL LAGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI
Sequences:
>Translated_234_residues MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDAR RIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLL LAGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI >Mature_233_residues TAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDARR IGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLL AGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25229; Mature: 25098
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSG CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCC KTHLAAIWRARANAVAVDARRIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAG CHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCC STLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLLAGVITKLFADRQVEVEPHV CEEEEEEHHCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH VQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSG CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCC KTHLAAIWRARANAVAVDARRIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAG CHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCC STLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLLAGVITKLFADRQVEVEPHV CEEEEEEHHCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH VQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA