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The map label for this gene is perM [C]

Identifier: 13476595

GI number: 13476595

Start: 6570135

End: 6571235

Strand: Direct

Name: perM [C]

Synonym: mlr7966

Alternate gene names: 13476595

Gene position: 6570135-6571235 (Clockwise)

Preceding gene: 13476594

Following gene: 13476596

Centisome position: 93.38

GC content: 64.21

Gene sequence:

>1101_bases
GTGGCCGGCGTCGCAGGACTTGCGCTGTTCCTCTATATGTTCAGCAACATCCTGCTGCCCTTCGTCGCCGGCATGGTGCT
TGCCTATTTCCTCGATCCGGTCGCCGATCGGCTGCAGCGTCTCGGCCTGTCCCGCTTCATGGCGACGGTGGTCATCCTCA
TCACCTTCCTCATTGTGCTGGTGCTGGCCTTTGTCATCCTCATTCCGGTGCTGGCGACGCAGATGGCCGATTTCGCCGGC
AAACTGCCGGAGTACCTGACCCGGCTGCAAAGCCTGATCACCTCCTTTGATCCGAAATGGCTGGAGCAGAAATTCGGCGT
CAACGCCAATGGCTTGCGTGATGGGCTGAACTCGCTGCTGACCTCGGGTTTCGGCCTGCTCACCACGGTCTTCACCTCGA
TCTGGAGTTCGGGCGTGGCGCTGGTCTCGGTGGTCAGCCTGTTCGTGGTGACGCCGGTCGTCGCCTTCTACATGCTGCTC
GACTGGGACCGCATGGTGGCGGTCATCGACAGCTGGGTGCCGCGCGACAATGTCGCGACCGTGCGCGCCATTGCGCGCGA
CATCAACACCGCGACCGCCGGCTTCGTGCGCGGCCAGGGCACGCTCTGCCTGGTGCTGGGCGCCATGTATGCCACCGGCC
TGACGCTGACCGGGCTGAACTTCGCCATCCTCATCGGCCTGTTCGCCGGGCTGATCTCCTTCATTCCCTATGTCGGCTCG
CTGACCGGGCTGGTGCTGGCGGTCGGCGTCGCTTTCGTCCAGTTCTGGCCGGACTGGACGATGATCGTCGCCGTCGCCGT
GGTCTTCTTCATCGGCCAGTTCATCGAAGGCAACATATTGCAGCCCAGGTTGGTCGGCAAAAGCGTTGGCCTGCATCCCG
TGTGGCTGATGTTCGCCCTGTTCGCCTTTGGCGCGCTGTTCGGTTTTGTCGGCTTGCTGATTGCCGTGCCGGCTTCCGCC
GCAGTCGCAGTTCTGGTGCGCTTCGCCATCGCCCGCTATCTCGAATCGCCGCTCTACAAGGGCCACGCGACAGAGCCCGC
GCCGCCGCTGCCGGCCGATCGCGGCGGCGGCCACCGCACCCAACCGCGTCGCTCGAAGTGA

Upstream 100 bases:

>100_bases
GGCTCCAATCCGGAAATCTGAGGAAGAAGCGGCGGTGATCGAGGCCGCGGCTGCCGATCTTGCCGCGGCCTCCGCGTTCC
GCCGGCAGATCTCCTTCTGG

Downstream 100 bases:

>100_bases
CCGCCCAGCGAACCGATCCGCCGCGCCAGCTGCCGCTCGATCTCGGCCACGGCACCGGCTATTCGCGCGACGAACTCGTC
GTCTCCGGCACCAACAACCA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MAGVAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQRLGLSRFMATVVILITFLIVLVLAFVILIPVLATQMADFAG
KLPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLLTSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLL
DWDRMVAVIDSWVPRDNVATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYVGS
LTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFALFAFGALFGFVGLLIAVPASA
AVAVLVRFAIARYLESPLYKGHATEPAPPLPADRGGGHRTQPRRSK

Sequences:

>Translated_366_residues
MAGVAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQRLGLSRFMATVVILITFLIVLVLAFVILIPVLATQMADFAG
KLPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLLTSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLL
DWDRMVAVIDSWVPRDNVATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYVGS
LTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFALFAFGALFGFVGLLIAVPASA
AVAVLVRFAIARYLESPLYKGHATEPAPPLPADRGGGHRTQPRRSK
>Mature_365_residues
AGVAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQRLGLSRFMATVVILITFLIVLVLAFVILIPVLATQMADFAGK
LPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLLTSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLLD
WDRMVAVIDSWVPRDNVATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYVGSL
TGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFALFAFGALFGFVGLLIAVPASAA
VAVLVRFAIARYLESPLYKGHATEPAPPLPADRGGGHRTQPRRSK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=326, Percent_Identity=28.2208588957055, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787885, Length=312, Percent_Identity=23.3974358974359, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39437; Mature: 39305

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQRLGLSRFMATVVILITFLIVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFVILIPVLATQMADFAGKLPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH
TSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDSWVPRDNVAT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYVGS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHH
FAFGALFGFVGLLIAVPASAAVAVLVRFAIARYLESPLYKGHATEPAPPLPADRGGGHRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QPRRSK
CCCCCC
>Mature Secondary Structure 
AGVAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQRLGLSRFMATVVILITFLIVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFVILIPVLATQMADFAGKLPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHH
TSGFGLLTTVFTSIWSSGVALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDSWVPRDNVAT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPYVGS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLMFAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHH
FAFGALFGFVGLLIAVPASAAVAVLVRFAIARYLESPLYKGHATEPAPPLPADRGGGHRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QPRRSK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]