Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13476534

Identifier: 13476534

GI number: 13476534

Start: 6519246

End: 6519662

Strand: Direct

Name: 13476534

Synonym: mlr7877

Alternate gene names: NA

Gene position: 6519246-6519662 (Clockwise)

Preceding gene: 13476533

Following gene: 13476539

Centisome position: 92.65

GC content: 58.99

Gene sequence:

>417_bases
GTGATGAGCAATTGCGCAATGGGCGCATTTCGTCCAGGCAAATACAGTCTATGCATTGTTGCGGCCGCGGCGATGATCTC
GGGGTGTCAGGCCCTGGATGCGACCAAAACCGATGCGGTCGCACTCAAGCCTGTGGTCCACGCGCTCCGCAGCAAACCTG
TGGTCCTGCCGGTCTACGTCATGTCCACGGTTCATTCGCTTAGAATCGAGCCTGAGCTTCTGACGACGAGCACGACAGGG
TCGACCGAAATTGACCACGCTTTCGTATCACCGCAGCCGATCAAAATCGGCACGCCGGGAGCCGGGAAGATCGCCTACAA
TCCGGCCATTGGTGGGTCGTTTCCGGGCAGTTCGCCCTATATCTGCAGCCCCAGCGGATTTGGCCAGCGCGCCAGTTGCC
ACCCGCGTTATTTTTGA

Upstream 100 bases:

>100_bases
TTCGGCGTGATTGTAAGTGGCAGGCGGCTACTCATGCGGCGTGAAGGCAACGACAGCATAGAATGCCGCACCTCGCCCTT
GGCTTGATAAGAGGGGATAC

Downstream 100 bases:

>100_bases
TCTAGCCAGCAGCGAGGGATGCTGCCGCCTTGCTTGGCGGCAATTCCATCGGTTTTGTCCGCAATCCGAAGAATGGCGCC
GCCGTCCTGACGATCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMSNCAMGAFRPGKYSLCIVAAAAMISGCQALDATKTDAVALKPVVHALRSKPVVLPVYVMSTVHSLRIEPELLTTSTTG
STEIDHAFVSPQPIKIGTPGAGKIAYNPAIGGSFPGSSPYICSPSGFGQRASCHPRYF

Sequences:

>Translated_138_residues
MMSNCAMGAFRPGKYSLCIVAAAAMISGCQALDATKTDAVALKPVVHALRSKPVVLPVYVMSTVHSLRIEPELLTTSTTG
STEIDHAFVSPQPIKIGTPGAGKIAYNPAIGGSFPGSSPYICSPSGFGQRASCHPRYF
>Mature_138_residues
MMSNCAMGAFRPGKYSLCIVAAAAMISGCQALDATKTDAVALKPVVHALRSKPVVLPVYVMSTVHSLRIEPELLTTSTTG
STEIDHAFVSPQPIKIGTPGAGKIAYNPAIGGSFPGSSPYICSPSGFGQRASCHPRYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14401; Mature: 14401

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSNCAMGAFRPGKYSLCIVAAAAMISGCQALDATKTDAVALKPVVHALRSKPVVLPVYV
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHH
MSTVHSLRIEPELLTTSTTGSTEIDHAFVSPQPIKIGTPGAGKIAYNPAIGGSFPGSSPY
HHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEECCCCCCCEEECCCCCCCCCCCCCE
ICSPSGFGQRASCHPRYF
EECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSNCAMGAFRPGKYSLCIVAAAAMISGCQALDATKTDAVALKPVVHALRSKPVVLPVYV
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCCCCEEEHHH
MSTVHSLRIEPELLTTSTTGSTEIDHAFVSPQPIKIGTPGAGKIAYNPAIGGSFPGSSPY
HHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEECCCCCCCEEECCCCCCCCCCCCCE
ICSPSGFGQRASCHPRYF
EECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA