| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476533
Identifier: 13476533
GI number: 13476533
Start: 6518171
End: 6518830
Strand: Direct
Name: 13476533
Synonym: mlr7876
Alternate gene names: NA
Gene position: 6518171-6518830 (Clockwise)
Preceding gene: 13476532
Following gene: 13476534
Centisome position: 92.64
GC content: 61.21
Gene sequence:
>660_bases GTGGGCGTCCTGCGTCATGGTCGTGTCGGCGCTATGCTGGATCGGGGTACGAAAACCGAAATGCGACCGCTGATTGCGCT GACAGTTTCGACCGGATTGCCTTGGCCTTGCACAAATCGTGAGCGGGAAGGCGGCCAGTCTGCCAGGCGTTCCTGGCTTT TGCCCCTGCTGGTCGTTTGTGGTCAGTTGGCGCTTTCCGGAGCGGCTCAAGCGGCCAACGAAAAGAACGCCAAGCCTGCT GAAGCCGACGCTACCGTGCCGACGGCTTTCGAGGTGCAGCGTCTCTACACCGACCACACATGGCTGTGGAAAGATGGAGC AGCCTACTTTGGACGGACCGGCCGCCCCTTCCGGGCCTGGACTTCGGGGCAGGATTCAGCCTCTGTCGCCGAGGGCAGGT GGCTGGTGACGAAAGACGGCAAGATGTGCATGGACGCCGCCTGGCGGTCCAAGAGCTACAAGGGCAAGCAGCAGCGGATC TGCTATAGCCACCGCGTCAGGGGCGGGACCATCGAGCAGCGCAAGGATCCGGACGGGGACTGGTACAGTTTCAAACGAAC CCCCGAGGACCTTTCCGATGAATACCGGAAATTCGAAGTGGGCGACACCAAGGGCGCGCAGTTCGAAGAGACCCGCAAGC TGATCGATTCCAAGAATTAG
Upstream 100 bases:
>100_bases GACATCGGTCTTTGCCCGGCTGTTAATGCTCGCAAAGTCAACTGCTGACCGCGCGACCTGGGAAATCCAGCATTGTGTCG CTGGAGAGAACGCTTCGTAA
Downstream 100 bases:
>100_bases GTCGTATCTCCAGCCAAACTGAGCCCGATGGTGCCTTGCGGCGTGGCCGGATTGAAGTTGTCGCGGCTGGGTTTCGCGAT CCTGCTCCGTCCCATTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MGVLRHGRVGAMLDRGTKTEMRPLIALTVSTGLPWPCTNREREGGQSARRSWLLPLLVVCGQLALSGAAQAANEKNAKPA EADATVPTAFEVQRLYTDHTWLWKDGAAYFGRTGRPFRAWTSGQDSASVAEGRWLVTKDGKMCMDAAWRSKSYKGKQQRI CYSHRVRGGTIEQRKDPDGDWYSFKRTPEDLSDEYRKFEVGDTKGAQFEETRKLIDSKN
Sequences:
>Translated_219_residues MGVLRHGRVGAMLDRGTKTEMRPLIALTVSTGLPWPCTNREREGGQSARRSWLLPLLVVCGQLALSGAAQAANEKNAKPA EADATVPTAFEVQRLYTDHTWLWKDGAAYFGRTGRPFRAWTSGQDSASVAEGRWLVTKDGKMCMDAAWRSKSYKGKQQRI CYSHRVRGGTIEQRKDPDGDWYSFKRTPEDLSDEYRKFEVGDTKGAQFEETRKLIDSKN >Mature_218_residues GVLRHGRVGAMLDRGTKTEMRPLIALTVSTGLPWPCTNREREGGQSARRSWLLPLLVVCGQLALSGAAQAANEKNAKPAE ADATVPTAFEVQRLYTDHTWLWKDGAAYFGRTGRPFRAWTSGQDSASVAEGRWLVTKDGKMCMDAAWRSKSYKGKQQRIC YSHRVRGGTIEQRKDPDGDWYSFKRTPEDLSDEYRKFEVGDTKGAQFEETRKLIDSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24620; Mature: 24489
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLRHGRVGAMLDRGTKTEMRPLIALTVSTGLPWPCTNREREGGQSARRSWLLPLLVVC CCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GQLALSGAAQAANEKNAKPAEADATVPTAFEVQRLYTDHTWLWKDGAAYFGRTGRPFRAW HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCC TSGQDSASVAEGRWLVTKDGKMCMDAAWRSKSYKGKQQRICYSHRVRGGTIEQRKDPDGD CCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC WYSFKRTPEDLSDEYRKFEVGDTKGAQFEETRKLIDSKN EEECCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure GVLRHGRVGAMLDRGTKTEMRPLIALTVSTGLPWPCTNREREGGQSARRSWLLPLLVVC CCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GQLALSGAAQAANEKNAKPAEADATVPTAFEVQRLYTDHTWLWKDGAAYFGRTGRPFRAW HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCC TSGQDSASVAEGRWLVTKDGKMCMDAAWRSKSYKGKQQRICYSHRVRGGTIEQRKDPDGD CCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC WYSFKRTPEDLSDEYRKFEVGDTKGAQFEETRKLIDSKN EEECCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA