| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yceG [C]
Identifier: 13476517
GI number: 13476517
Start: 6499773
End: 6500900
Strand: Direct
Name: yceG [C]
Synonym: mlr7854
Alternate gene names: 13476517
Gene position: 6499773-6500900 (Clockwise)
Preceding gene: 13476516
Following gene: 13476518
Centisome position: 92.38
GC content: 63.3
Gene sequence:
>1128_bases GTGTTCATGAACTTCGTCATCTCCCTGGTGATGCTGATGGTTCTTGCCGCGGGCGCAGCACTTTACTTCGGCAAGCAGGA ATTCATCGAACCCGGTCCTTCGGCCAATGGCGACACCTTTCTGGTCAAGCCGAACACCGGCGTCCAGGACATCGCCGACC AGCTTGAGCGCCGTGGACTGATCAGCGACGCCCGCGTCTTCCGCCTTGGCGTGCGTGCTTTCGGCAACGATTCCGCGCTC AAGGCCGGCGAATACGAGATCAAGCCCCGGGCATCCATGCGCGACATCATGGAGCTTTTGAAAAGCGGCAAGTCGGTGAT GTATTCCCTGACCATTCCGGAAGGGCTGACGGTCGAGCAGGCCCTGCAGCGTATCGCCGATGAACCCGCCTTGAGCGGCG ACATGCCGGCGACAACGCCCCCGGAGGGCAGCCTTGCCACCGACACGCTGCGCTTCACGCGCGGTGCGACGCGCCAGCAG ATGATCGACAAGCTGGTGGCCGATCAGAAGAAACTGGTCGACGAGGTCTGGCAGCGGCGTGCGCCGGATCTGCCGCTGGC CAATATCGAAGACTTTGTCACCCTGGCCTCGATCGTCGAGAAGGAAACCGGCAAGGGTGACGAGCGTTCGCGCGTCGCCG CCGTCTTCCTCAACCGCTTGGCCAAGGGCATGCGCCTGCAATCCGATCCGACCATCATCTATGGTCTGTTCGGCGGCAAG GGAAAGCCCGCGGACCGCCCGATCTACCAGTCGGACATCCAGAAGCAGACGCCTTACAATACCTATGTGATCAGCGGCCT GCCGCCGACGCCCATCGCCAATCCGGGCCGTGCAGCACTTGAGGCCGTGGCCAATCCATCGAAGACCGACGATCTCTATT TTGTCGCCGACGGTGCAGGCGGTCACGTCTTTGCCGCGACGCTCGACGAGCACAATGAGAACGTCGCCCGTTATCGTGCG CTGCAGAAGAAGCAGGCCGATGACGCGGCCAAGGCCGCCGCTGCCGCTGGTACAAACGGCAATGCCGACAAGCCTGCTAC CGACAAACCAGCTGCCGACAAGCCTGCCGACGGCAGCACCGGGGGCGACAATGGCGACGCCGGCGGCGACGCGGGCGATG CCCAGTAG
Upstream 100 bases:
>100_bases TACCGGACCGATCGTGCCGAAGACGGCCAGCGAGGCCTTGCGGCCGGAAGCCGGAACGCCGCCGCCGAAGCGCTCGCGCG CTTCGCGCAGCCAGGTCGTC
Downstream 100 bases:
>100_bases GTGAAGAAAGGCGTTGCCCGGAGGGCGACAGCCTGACATTTGAAGGAACGCCATGCGTCCGATTTCGACGCACCTACGGC GTGGTTATTTTCAAGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MFMNFVISLVMLMVLAAGAALYFGKQEFIEPGPSANGDTFLVKPNTGVQDIADQLERRGLISDARVFRLGVRAFGNDSAL KAGEYEIKPRASMRDIMELLKSGKSVMYSLTIPEGLTVEQALQRIADEPALSGDMPATTPPEGSLATDTLRFTRGATRQQ MIDKLVADQKKLVDEVWQRRAPDLPLANIEDFVTLASIVEKETGKGDERSRVAAVFLNRLAKGMRLQSDPTIIYGLFGGK GKPADRPIYQSDIQKQTPYNTYVISGLPPTPIANPGRAALEAVANPSKTDDLYFVADGAGGHVFAATLDEHNENVARYRA LQKKQADDAAKAAAAAGTNGNADKPATDKPAADKPADGSTGGDNGDAGGDAGDAQ
Sequences:
>Translated_375_residues MFMNFVISLVMLMVLAAGAALYFGKQEFIEPGPSANGDTFLVKPNTGVQDIADQLERRGLISDARVFRLGVRAFGNDSAL KAGEYEIKPRASMRDIMELLKSGKSVMYSLTIPEGLTVEQALQRIADEPALSGDMPATTPPEGSLATDTLRFTRGATRQQ MIDKLVADQKKLVDEVWQRRAPDLPLANIEDFVTLASIVEKETGKGDERSRVAAVFLNRLAKGMRLQSDPTIIYGLFGGK GKPADRPIYQSDIQKQTPYNTYVISGLPPTPIANPGRAALEAVANPSKTDDLYFVADGAGGHVFAATLDEHNENVARYRA LQKKQADDAAKAAAAAGTNGNADKPATDKPAADKPADGSTGGDNGDAGGDAGDAQ >Mature_375_residues MFMNFVISLVMLMVLAAGAALYFGKQEFIEPGPSANGDTFLVKPNTGVQDIADQLERRGLISDARVFRLGVRAFGNDSAL KAGEYEIKPRASMRDIMELLKSGKSVMYSLTIPEGLTVEQALQRIADEPALSGDMPATTPPEGSLATDTLRFTRGATRQQ MIDKLVADQKKLVDEVWQRRAPDLPLANIEDFVTLASIVEKETGKGDERSRVAAVFLNRLAKGMRLQSDPTIIYGLFGGK GKPADRPIYQSDIQKQTPYNTYVISGLPPTPIANPGRAALEAVANPSKTDDLYFVADGAGGHVFAATLDEHNENVARYRA LQKKQADDAAKAAAAAGTNGNADKPATDKPAADKPADGSTGGDNGDAGGDAGDAQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=302, Percent_Identity=39.0728476821192, Blast_Score=205, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39970; Mature: 39970
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMNFVISLVMLMVLAAGAALYFGKQEFIEPGPSANGDTFLVKPNTGVQDIADQLERRGL CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC ISDARVFRLGVRAFGNDSALKAGEYEIKPRASMRDIMELLKSGKSVMYSLTIPEGLTVEQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHH ALQRIADEPALSGDMPATTPPEGSLATDTLRFTRGATRQQMIDKLVADQKKLVDEVWQRR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC APDLPLANIEDFVTLASIVEKETGKGDERSRVAAVFLNRLAKGMRLQSDPTIIYGLFGGK CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEECCCCCEEEEEECCC GKPADRPIYQSDIQKQTPYNTYVISGLPPTPIANPGRAALEAVANPSKTDDLYFVADGAG CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCC GHVFAATLDEHNENVARYRALQKKQADDAAKAAAAAGTNGNADKPATDKPAADKPADGST CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGDNGDAGGDAGDAQ CCCCCCCCCCCCCCC >Mature Secondary Structure MFMNFVISLVMLMVLAAGAALYFGKQEFIEPGPSANGDTFLVKPNTGVQDIADQLERRGL CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCC ISDARVFRLGVRAFGNDSALKAGEYEIKPRASMRDIMELLKSGKSVMYSLTIPEGLTVEQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHH ALQRIADEPALSGDMPATTPPEGSLATDTLRFTRGATRQQMIDKLVADQKKLVDEVWQRR HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC APDLPLANIEDFVTLASIVEKETGKGDERSRVAAVFLNRLAKGMRLQSDPTIIYGLFGGK CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEECCCCCEEEEEECCC GKPADRPIYQSDIQKQTPYNTYVISGLPPTPIANPGRAALEAVANPSKTDDLYFVADGAG CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCC GHVFAATLDEHNENVARYRALQKKQADDAAKAAAAAGTNGNADKPATDKPAADKPADGST CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGDNGDAGGDAGDAQ CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]