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The map label for this gene is recO

Identifier: 13476445

GI number: 13476445

Start: 6431958

End: 6432719

Strand: Direct

Name: recO

Synonym: mlr7769

Alternate gene names: 13476445

Gene position: 6431958-6432719 (Clockwise)

Preceding gene: 13476444

Following gene: 13476446

Centisome position: 91.41

GC content: 66.93

Gene sequence:

>762_bases
ATGGAATGGCGCGACGAGGGAATCATTCTCGGCACCCGCAAGCATGGCGAAACCAGCGCCATCCTCGAGGTGATGACCCG
CGCGCATGGCCGCCATCTCGGTCTTGTGCGCGGCGGCCGTTCGCGCAAGCAGCAGCCCGTTCTCCAGCCAGGCAATCGCG
TCGATCTGTTGTGGCGGGCGCGCCTTGACGAGCATCTCGGCACGTTCCAGGCCGAGGCCATCGAGATGAATGCCGCCCGG
CTGATGGACAGCGCCGTCGCCGTCTACGGCCTGCAGACCATGGCCGCGCATTTGCGCCTCTTGCCCGAGCGTGACGCGCA
TGGCGGCCTTTACGAAGCGCTTTCCGTGATGATCGTCCATCTCGACGATGCCGATGCCGCCGGCGAACTGGTGGCGCGCT
TCGAACTTCTGATCCTTGATGAACTTGGCTTCGGCCTCGACCTCAGCCAGTGCGCCGCCACCGGCACAAGGCAGGATCTG
GCCTATGTCTCGCCGAAGTCGGGCCGCGCGGTGTCGCGCGAGGCCGGCGCGCCGTGGCGTGACAAGATGCTGGCGCTGCC
GGCCTTTCTGCAGCGCGGTTCCGGCCTGCGCGCCGATCCTGCGGCGGTCGAGGACGCCTTCCGGCTGACCGGGTTTTTCT
TCACGCGCCACGTCTATGAGCCGCGTGCCATCGAACAGCCCGATGCCCGCGCCGGCTTTCTCGCCGCCTTGCGCAAGCAT
CACGCGACGCGCAAGGCCATTGCCGGAGACAATGCCGCATGA

Upstream 100 bases:

>100_bases
TCTTGCTGCGGGCGGTTTTTTTATGCGTTGGTGCAAGAGCCGGCCCAGGCGCCAGGCCCATACCTTGATTTCGCCATCCA
ACCGGTGAAAAGCTCCGGAA

Downstream 100 bases:

>100_bases
GAGAGGTCGAACGTTATCCGGACCTGGTTCGTCGCGCGGCGGCAAGGTCTTGGCTTTCGGCACCGAGACATGTTCGATAT
TTCCAGCCGCAAATCTGGCG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRARLDEHLGTFQAEAIEMNAAR
LMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVHLDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDL
AYVSPKSGRAVSREAGAPWRDKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRKH
HATRKAIAGDNAA

Sequences:

>Translated_253_residues
MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRARLDEHLGTFQAEAIEMNAAR
LMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVHLDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDL
AYVSPKSGRAVSREAGAPWRDKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRKH
HATRKAIAGDNAA
>Mature_253_residues
MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRARLDEHLGTFQAEAIEMNAAR
LMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVHLDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDL
AYVSPKSGRAVSREAGAPWRDKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRKH
HATRKAIAGDNAA

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_RHILO (Q985A3)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_108015.1
- ProteinModelPortal:   Q985A3
- GeneID:   1230670
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr7769
- NMPDR:   fig|266835.1.peg.6116
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27748; Mature: 27748

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHH
RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEE
LDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWR
ECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHEEECCCCCCCCCCCCCCCHH
DKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRKH
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
HATRKAIAGDNAA
HHHHHHCCCCCCC
>Mature Secondary Structure
MEWRDEGIILGTRKHGETSAILEVMTRAHGRHLGLVRGGRSRKQQPVLQPGNRVDLLWRA
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHH
RLDEHLGTFQAEAIEMNAARLMDSAVAVYGLQTMAAHLRLLPERDAHGGLYEALSVMIVH
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEE
LDDADAAGELVARFELLILDELGFGLDLSQCAATGTRQDLAYVSPKSGRAVSREAGAPWR
ECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHEEECCCCCCCCCCCCCCCHH
DKMLALPAFLQRGSGLRADPAAVEDAFRLTGFFFTRHVYEPRAIEQPDARAGFLAALRKH
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
HATRKAIAGDNAA
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968