| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476446
Identifier: 13476446
GI number: 13476446
Start: 6432912
End: 6435344
Strand: Direct
Name: 13476446
Synonym: mlr7771
Alternate gene names: NA
Gene position: 6432912-6435344 (Clockwise)
Preceding gene: 13476445
Following gene: 13476447
Centisome position: 91.43
GC content: 67.04
Gene sequence:
>2433_bases ATGTTTGAAAGCCTGATCGGCCTTGTCGCCATCATCGCCTTGTTCGTCATTATTTCGCGTCAGCAGAGCCGCATCGGTCT GATCGAACGCGAACTTGGCGCGCTGCGCAGTCTCGTCCTGTCGGGCGCCGTGCCGCCGGTGGCCAAGCCGGCAGAACAGA TGGCGGCCGATGGCAAGGCCGAAGCGGCGCCGGTGCCCGCGGCCGCGGCCGATATTGCCTCGCCGGCGGTGAGCGAACCG GTCGTACAGGCGTCGGCTACAGAAACGGAAGCTCCGGCTGGCGAGGCTGTGTCCGGTCCCTGGTCCACGAGCGAGGCTCC GAAGGCAGCGGAACCTGCCGAGCCGGTTGCAGGGGCCAACCCCCCCGGCAAGCCGGATATTGAGACGGCACTCGGCACGC GCTGGGCGGTCTGGGTCGGCGGCATCGCGCTGGCGCTGGGTGGTCTGTTCCTGATCCGCTACACAATCGAAGCCGGCATC TTCGGCCCCGGCGTGCGGCTCACCATGGCGGCGGTGCTCGGGCTGGTGTTGGTCGCCGGCGGCGAGTTCATTCGCCGCAC CGGCTTCAAGGTGCCCGTGCAAGGCGTTGCCGGCGCCTATATTCCGGCGATCCTGACGGCGGCAGGTGCCTTCATCCTGT TCGGCACCGTCTATGCCGCCCATGGCATTTACGGCTTCATCGGCCCGGCGCTTGCCTTCACGCTGCTCGGTGCCATTGGC GTGGCGACAATCGCGGCGGCCCTGGTCCATGGCCTAGCACTGGCCGGCATCGGCCTCGTCGGCGCCATGGTGACGCCGGT GCTGGTCGCCTCGCAGGCGCCCAATCCCTGGGCGTTGTTCGGCTACCTCGCCATCGTGCTCGCCACCACCGCTGTCATCG CCCGCATGCGCGACTGGAAAGCGCTGATGGCGGCGGCCTTTTTCGGCACCGGCATCTGGACTATCCTTTACATGACCGAC GCGCCGGGCGTGAACCTCCCCGCCATCCTGTTCATCGATGCCGTCACCCTGGCCGTGCTCGCTTTTGTCTGGCTCGGCGG CCATCGCGACGAAACCGCCAGGACCTTCGACTGGCCGTCCATCGTGCCTGGCCTGTTCGTTGCCTTCTCGGCGCTGGGCC TGTCGGTCGACCCGACCTTCGCCGCGGCCGGCTACGCCTTGCCGGGTGCCGCGATCCTCGCGGCGATGGTGGCTGTCGCC CTTTATCGCCCGCTGGCGCTGCCGCTGCTTTACGCCGCCGGACTGGCGACGGTCATGATCTATCTTGGCATCATCCCGCC AACCTCGATCGCGTCCGACTTTTCGGCCGGCGCTCTCGGTGTCGATGGTTTGCCCGTGGCGACGTCCAATGCCTTGACCT TGCGCATCGGCATCGCGCTGGGCCTGGTCTTCATCGGCGCGGGCCTGTGGGCCGCCCGCAAATTCGCGGCATCTTCCCCG CTTCGATCCGCTTCATGGGCGGCATCGGGTGCCGTCGTGCCACTGGTCATCCTGCTGGCACTCTGGTTCACCTTCGGCAA TCTCGACCGCGACTTTGTCTACGCCGCCGTCGCAGCGCTGATGGTCGTGGTTTTCGCCGGAGGCGGCGAGTGGATCGCGC GCGCCGAAGAGCCTTCGCTCAAGGGCGGGATAGCAGTTTCGTTTGCCCTGGTCGGTGCGGCGCTCGCCGGTCTCTTGATG CTGCACATGGCTTTCAGTTCCGGCTGGACCACCATTCTGCTTGGTGCAGCAGCCATCGTGCCGGCGCTGGCGACGCGCTG GCGCTCGTACCCGGTGCTCGGCTGGATTTCGGTTGGCGCCGTGATCGCCGTGCTTGGCCGCGTCGCCTTCGATCCGACCA TCGTCGGCGCCGAGTTCCTGTCGACGACACCGGTGTTCAACTGGCTGCTGCCGGGCTATGGCGTCCCGGCGCTCGCCTTC GGCTTCGCCGCCTGGCAACTCGCCCGCACCACCAATGGCCGGCCGCGCCTCGCCATGGAAGCGGCCGCGGCGCTGTTTGC GCTGCTTGCCGTTGCCATGCTGGTGCGTCACGCCATGCATGGCGGCGTCATCGACACGGGTCCGATGACGCTCGCCGAAC AGGCGATCTACACGCTGATCGCCATCGGCGCCGGCGCCATCCTGGTCGCCATCGACATGCGCTCGCCAAGCTCGGTATGG TTCGATGGCGGCCGGCGTGGTTTCGGTCGCCTTGATCGTCGTCCGGCATTTCGGGGTGCTCAATCCGCTGTTTACGGACG AATCGACCGGCCGGATCCCGGTCTTCAACCTGTTGTTCCTTGCCTATCTCTTGCCGGCCGTAGCCGCCGGCGGACTGGCG CTCTATGTCAGGGGCAAGCGGCCGAAATGGTATTCGGCAATGCTGGCACTGGTCGCGGCGCTGCTTGCCTTTGCGTATGC CACCCTGTCGGTCAGGCGGCTGTTCAAGGGTGA
Upstream 100 bases:
>100_bases ATCTGGCGGCACGTTGAGTTTTCCAGCCGTTTAGCCGCCGCATTTGGATGTCAGTGAAATGAAACGTCAGTGAAAACTGG CCTGGTTTGGGGGAACCGCC
Downstream 100 bases:
>100_bases GTTCATCGGCCTGTGGAGTAGGCTTGGCCAGTTGGAGACCTACACCTATTCGGCGCTCTGGCTGGTGATCGGCGTGGCGC TGCTCACCGCCGGCGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MFESLIGLVAIIALFVIISRQQSRIGLIERELGALRSLVLSGAVPPVAKPAEQMAADGKAEAAPVPAAAADIASPAVSEP VVQASATETEAPAGEAVSGPWSTSEAPKAAEPAEPVAGANPPGKPDIETALGTRWAVWVGGIALALGGLFLIRYTIEAGI FGPGVRLTMAAVLGLVLVAGGEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGAIG VATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRDWKALMAAAFFGTGIWTILYMTD APGVNLPAILFIDAVTLAVLAFVWLGGHRDETARTFDWPSIVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVA LYRPLALPLLYAAGLATVMIYLGIIPPTSIASDFSAGALGVDGLPVATSNALTLRIGIALGLVFIGAGLWAARKFAASSP LRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAGGGEWIARAEEPSLKGGIAVSFALVGAALAGLLM LHMAFSSGWTTILLGAAAIVPALATRWRSYPVLGWISVGAVIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAF GFAAWQLARTTNGRPRLAMEAAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAGAILVAIDMRSPSSVW FDGGRRGFGRLDRRPAFRGAQSAVYGRIDRPDPGLQPVVPCLSLAGRSRRRTGALCQGQAAEMVFGNAGTGRGAACLCVC HPVGQAAVQG
Sequences:
>Translated_810_residues MFESLIGLVAIIALFVIISRQQSRIGLIERELGALRSLVLSGAVPPVAKPAEQMAADGKAEAAPVPAAAADIASPAVSEP VVQASATETEAPAGEAVSGPWSTSEAPKAAEPAEPVAGANPPGKPDIETALGTRWAVWVGGIALALGGLFLIRYTIEAGI FGPGVRLTMAAVLGLVLVAGGEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGAIG VATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRDWKALMAAAFFGTGIWTILYMTD APGVNLPAILFIDAVTLAVLAFVWLGGHRDETARTFDWPSIVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVA LYRPLALPLLYAAGLATVMIYLGIIPPTSIASDFSAGALGVDGLPVATSNALTLRIGIALGLVFIGAGLWAARKFAASSP LRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAGGGEWIARAEEPSLKGGIAVSFALVGAALAGLLM LHMAFSSGWTTILLGAAAIVPALATRWRSYPVLGWISVGAVIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAF GFAAWQLARTTNGRPRLAMEAAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAGAILVAIDMRSPSSVW FDGGRRGFGRLDRRPAFRGAQSAVYGRIDRPDPGLQPVVPCLSLAGRSRRRTGALCQGQAAEMVFGNAGTGRGAACLCVC HPVGQAAVQG >Mature_810_residues MFESLIGLVAIIALFVIISRQQSRIGLIERELGALRSLVLSGAVPPVAKPAEQMAADGKAEAAPVPAAAADIASPAVSEP VVQASATETEAPAGEAVSGPWSTSEAPKAAEPAEPVAGANPPGKPDIETALGTRWAVWVGGIALALGGLFLIRYTIEAGI FGPGVRLTMAAVLGLVLVAGGEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGAIG VATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRDWKALMAAAFFGTGIWTILYMTD APGVNLPAILFIDAVTLAVLAFVWLGGHRDETARTFDWPSIVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVA LYRPLALPLLYAAGLATVMIYLGIIPPTSIASDFSAGALGVDGLPVATSNALTLRIGIALGLVFIGAGLWAARKFAASSP LRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAGGGEWIARAEEPSLKGGIAVSFALVGAALAGLLM LHMAFSSGWTTILLGAAAIVPALATRWRSYPVLGWISVGAVIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAF GFAAWQLARTTNGRPRLAMEAAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAGAILVAIDMRSPSSVW FDGGRRGFGRLDRRPAFRGAQSAVYGRIDRPDPGLQPVVPCLSLAGRSRRRTGALCQGQAAEMVFGNAGTGRGAACLCVC HPVGQAAVQG
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82828; Mature: 82828
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESLIGLVAIIALFVIISRQQSRIGLIERELGALRSLVLSGAVPPVAKPAEQMAADGKA CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC EAAPVPAAAADIASPAVSEPVVQASATETEAPAGEAVSGPWSTSEAPKAAEPAEPVAGAN CCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGKPDIETALGTRWAVWVGGIALALGGLFLIRYTIEAGIFGPGVRLTMAAVLGLVLVAG CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGAIG CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRDWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALMAAAFFGTGIWTILYMTDAPGVNLPAILFIDAVTLAVLAFVWLGGHRDETARTFDWPS HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVALYRPLALPLLYAAGLATVMI HHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGIIPPTSIASDFSAGALGVDGLPVATSNALTLRIGIALGLVFIGAGLWAARKFAASSP HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC LRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAGGGEWIARAEEPSL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC KGGIAVSFALVGAALAGLLMLHMAFSSGWTTILLGAAAIVPALATRWRSYPVLGWISVGA CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAFGFAAWQLARTTNGRPRLAME HHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH AAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAGAILVAIDMRSPSSVW HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE FDGGRRGFGRLDRRPAFRGAQSAVYGRIDRPDPGLQPVVPCLSLAGRSRRRTGALCQGQA ECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC AEMVFGNAGTGRGAACLCVCHPVGQAAVQG HHEEECCCCCCCCCEEEEEECCCCHHHCCC >Mature Secondary Structure MFESLIGLVAIIALFVIISRQQSRIGLIERELGALRSLVLSGAVPPVAKPAEQMAADGKA CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC EAAPVPAAAADIASPAVSEPVVQASATETEAPAGEAVSGPWSTSEAPKAAEPAEPVAGAN CCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGKPDIETALGTRWAVWVGGIALALGGLFLIRYTIEAGIFGPGVRLTMAAVLGLVLVAG CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GEFIRRTGFKVPVQGVAGAYIPAILTAAGAFILFGTVYAAHGIYGFIGPALAFTLLGAIG CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATIAAALVHGLALAGIGLVGAMVTPVLVASQAPNPWALFGYLAIVLATTAVIARMRDWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALMAAAFFGTGIWTILYMTDAPGVNLPAILFIDAVTLAVLAFVWLGGHRDETARTFDWPS HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IVPGLFVAFSALGLSVDPTFAAAGYALPGAAILAAMVAVALYRPLALPLLYAAGLATVMI HHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLGIIPPTSIASDFSAGALGVDGLPVATSNALTLRIGIALGLVFIGAGLWAARKFAASSP HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC LRSASWAASGAVVPLVILLALWFTFGNLDRDFVYAAVAALMVVVFAGGGEWIARAEEPSL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC KGGIAVSFALVGAALAGLLMLHMAFSSGWTTILLGAAAIVPALATRWRSYPVLGWISVGA CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VIAVLGRVAFDPTIVGAEFLSTTPVFNWLLPGYGVPALAFGFAAWQLARTTNGRPRLAME HHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH AAAALFALLAVAMLVRHAMHGGVIDTGPMTLAEQAIYTLIAIGAGAILVAIDMRSPSSVW HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCE FDGGRRGFGRLDRRPAFRGAQSAVYGRIDRPDPGLQPVVPCLSLAGRSRRRTGALCQGQA ECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC AEMVFGNAGTGRGAACLCVCHPVGQAAVQG HHEEECCCCCCCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA