Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476401

Identifier: 13476401

GI number: 13476401

Start: 6387617

End: 6388213

Strand: Direct

Name: 13476401

Synonym: mlr7711

Alternate gene names: NA

Gene position: 6387617-6388213 (Clockwise)

Preceding gene: 13476400

Following gene: 13476407

Centisome position: 90.78

GC content: 62.98

Gene sequence:

>597_bases
ATGCGCCGGACAGTTCTGACATGCCTCGTCGCCATCGGGGCGCTGTTTGCGCCACAGGCCTCAGCCGGCACCAGGGCAGT
GATCCAGACGCTGACCTACGACGTCACGGGAAGCTCGGGCGCCGCCCTCGTCGACGCGATGGACAGAAAAGGCCCCCGGC
ACGGCTTCATGACGCATGCCATCGCCACAACCGCCTATACCGTCGACTGGGACCTCGACGCCGGCCAGGGCAACGGCTTC
TGCCGGATACGTGGGGTCAATGGCACGCTCAATCTTTCCTACACCTTCCCGCACCTTGCCCCGCCCGCCACGCCGGCGCT
GAAGAGGCGCTGGAACAGGTTTTTCGCAGGTGTTCGCGCCCATGAGGAAACACATGGGCGCATTGCCAGGGAGATGATGC
GCGCTACGGAAAAGTCGATAACCGGCTTGCGGATCGCCAACGATCCGTCCTGCTACAAGGCGCGCCGCGAAGCTCAGCTT
CGCATCCGGGCCGTCTATGCCGAATATGAGGCCAAACAAATCGCCTTCGATCGGCGCGAACACAGCAGTGGCGGCCATGT
CGAACATCTGATCGCTGCCTTGACCGGAAAACCATGA

Upstream 100 bases:

>100_bases
AAAATGCAGGTAGGGCTGGCCGCGAGGGCATGCAGGCCAGCAGAAACGTTGAAACGGCCACCGGTCTATGGTTCCTTCTC
TGGAGATAGGGAGAAGGCCG

Downstream 100 bases:

>100_bases
ACCGAGTGATCCGGTCAGCGCCGTGGCGCGCGAGCTTCGCTCAGCCGCGCGGCTTGGCCGACAAGTCGCTCGCCGCGAGC
GCTGTGGCGTGGCCATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF
CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL
RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP

Sequences:

>Translated_198_residues
MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF
CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL
RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP
>Mature_198_residues
MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF
CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL
RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP

Specific function: Unknown

COG id: COG5664

COG function: function code O; Predicted secreted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21736; Mature: 21736

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHA
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCHHHHH
IATTAYTVDWDLDAGQGNGFCRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRA
HHHEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
HEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQLRIRAVYAEYEAKQIAFDRRE
CHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHC
HSSGGHVEHLIAALTGKP
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHA
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCHHHHH
IATTAYTVDWDLDAGQGNGFCRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRA
HHHEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
HEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQLRIRAVYAEYEAKQIAFDRRE
CHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHC
HSSGGHVEHLIAALTGKP
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA