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The map label for this gene is ydiS [C]

Identifier: 13476400

GI number: 13476400

Start: 6385801

End: 6387480

Strand: Direct

Name: ydiS [C]

Synonym: mlr7709

Alternate gene names: 13476400

Gene position: 6385801-6387480 (Clockwise)

Preceding gene: 13476399

Following gene: 13476401

Centisome position: 90.76

GC content: 63.69

Gene sequence:

>1680_bases
ATGAGCGATATCGAACGCGAAAGCATGGAATTCGACGTGGTCATCGTCGGTGCGGGTCCGGCCGGCCTTGCCGCGGCCAT
CCGCCTCAAGCAGGTCAATCCCGAGCTTTCCGTCGTCGTGCTGGAAAAGGGCGGCGAGGTCGGCGCCCATATCCTCTCTG
GCGCCGTGGTCGATCCGATCGGCATCGACCGTCTGCTGCCGGGTTGGCGCGAGGAGGAAGGTCATCCTTTCAAGACGCCG
GTCACTGCGGATCATTTCCTGGTGCTCGGCCCTGCCGGCTCGTTTCGCCTGCCCAACATATTGATGCCGCCGCTGATGAA
CAATCACGGCAACTACATCGTCTCGCTCGGCAATGTCTGCCGGTGGCTGGCCGGCAAGGCCGAGGCGCTCGGTGTCGAGA
TCTATCCGGGCTTTGCCGCCGCAGGCCTGCTCTACAATGAGGAAGGCGCAGTCACCGGCGTCGTCACCGGCGACATGGGC
GTCGAGAAGGACGGCACGCATGGGCCGGGCTTCGCGCCGGGCATGGCGCTGATGGGCAAATATGTGCTGATCGGCGAAGG
CGCGCGCGGCTCGCTCGCCAAGCAGTTGATCGCCAAATACAAACTTTCCGACGGCCGCGAGCCAGGCAAATACGGCATCG
GTCTCAAGGAACTCTGGCAAGTCAAGCCGGAGAACCACCGGCCGGGCCTGGTCCAGCATTCCTTCGGCTGGCCGCTCGAC
ATGAAGACCGGCGGTGGCTCCTTCCTCTACCATCTCGAGGACAACCAGGTGGCGGTCGGCTTCGTCCTCCACCTCAATTA
CAAGAACCCCTATCTGTCGCCCTTCGAGGAATTCCAGCGTTTCAAGACCCATCCGGCAATCAGGGGCACGTTCGAGGGCG
CCAAGCGGCTCGGCTATGGCGCGCGCGCCATCACCGAGGGCGGCTGGCAGTCGGTGCCGAAACTGTCGTTCCCCGGCGGC
GCGCTGATGGGTTGCGCTGCCGGCTTCGTCAACGTGCCGCGCATCAAGGGCTCCCACAATGCCGTGCTGTCGGGCATGCT
GGCGGCCGAACATGTCGCCGAGGCTATTGGCGCCGGCCGCGCCAATGACGAGCTCTCTTCCTACGAGCAAGCCTGGCGGG
CGACCGACATCGGCAAGGATTTGAAGAAGGTGCGCAACGTCAAGCCGCTGTGGTCGCGCTTCGGCACCATCGTCGGCGTC
GGTCTTGGTGGCCTCGACATGTGGCTGAACACGCTGTTCGGCAACTCGCCCTTCGGCACGCTGAAGCACGGCAAGGCCGA
CTATGCCACGCTCGAGCCCGCCGCCCAGCACAAGAAGATCGCCTATCCGAAGCCTGATGGCGTGCTGACCTTCGACCGCC
TGTCCTCGGTGTTCCTGTCCAACACCAATCACGAAGAGAACGAGCCGGTCCATCTGCTGGTCGCCGATATGGAACTGCAG
AAGCGATCCGAACACGATGTCTTTGCCGGGCCTTCGACCCGCTATTGCCCGGCCGGCGTCTATGAATGGGTCGACAAGGA
CGGCAACACCGCCGCCGATCCGGCGGCGCAAGACGTCCGCTTCGTCATCAACGCGCAGAACTGCGTCCACTGCAAGACTT
GCGATATCAAGGATCCGAACCAGAACATCAACTGGGTGCCGCCGCAAGGCGGCGAGGGTCCGGTCTACCAGGGCATGTGA

Upstream 100 bases:

>100_bases
ATTGTCACGTCTGCGCCGGTTTCCTGTCGCCAATTGATGCGCTATGCAGCGCAGGAGCCAGCAAGATACGCAACAGCGGC
AAGCCAGTGCGGAGGGGTTG

Downstream 100 bases:

>100_bases
CCTCGCGCGGCCGGCGGTTTCGGCCTCGGCGGCAAGAAAATGCAGGTAGGGCTGGCCGCGAGGGCATGCAGGCCAGCAGA
AACGTTGAAACGGCCACCGG

Product: electron transfer flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MSDIERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGGEVGAHILSGAVVDPIGIDRLLPGWREEEGHPFKTP
VTADHFLVLGPAGSFRLPNILMPPLMNNHGNYIVSLGNVCRWLAGKAEALGVEIYPGFAAAGLLYNEEGAVTGVVTGDMG
VEKDGTHGPGFAPGMALMGKYVLIGEGARGSLAKQLIAKYKLSDGREPGKYGIGLKELWQVKPENHRPGLVQHSFGWPLD
MKTGGGSFLYHLEDNQVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRGTFEGAKRLGYGARAITEGGWQSVPKLSFPGG
ALMGCAAGFVNVPRIKGSHNAVLSGMLAAEHVAEAIGAGRANDELSSYEQAWRATDIGKDLKKVRNVKPLWSRFGTIVGV
GLGGLDMWLNTLFGNSPFGTLKHGKADYATLEPAAQHKKIAYPKPDGVLTFDRLSSVFLSNTNHEENEPVHLLVADMELQ
KRSEHDVFAGPSTRYCPAGVYEWVDKDGNTAADPAAQDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYQGM

Sequences:

>Translated_559_residues
MSDIERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGGEVGAHILSGAVVDPIGIDRLLPGWREEEGHPFKTP
VTADHFLVLGPAGSFRLPNILMPPLMNNHGNYIVSLGNVCRWLAGKAEALGVEIYPGFAAAGLLYNEEGAVTGVVTGDMG
VEKDGTHGPGFAPGMALMGKYVLIGEGARGSLAKQLIAKYKLSDGREPGKYGIGLKELWQVKPENHRPGLVQHSFGWPLD
MKTGGGSFLYHLEDNQVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRGTFEGAKRLGYGARAITEGGWQSVPKLSFPGG
ALMGCAAGFVNVPRIKGSHNAVLSGMLAAEHVAEAIGAGRANDELSSYEQAWRATDIGKDLKKVRNVKPLWSRFGTIVGV
GLGGLDMWLNTLFGNSPFGTLKHGKADYATLEPAAQHKKIAYPKPDGVLTFDRLSSVFLSNTNHEENEPVHLLVADMELQ
KRSEHDVFAGPSTRYCPAGVYEWVDKDGNTAADPAAQDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYQGM
>Mature_558_residues
SDIERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGGEVGAHILSGAVVDPIGIDRLLPGWREEEGHPFKTPV
TADHFLVLGPAGSFRLPNILMPPLMNNHGNYIVSLGNVCRWLAGKAEALGVEIYPGFAAAGLLYNEEGAVTGVVTGDMGV
EKDGTHGPGFAPGMALMGKYVLIGEGARGSLAKQLIAKYKLSDGREPGKYGIGLKELWQVKPENHRPGLVQHSFGWPLDM
KTGGGSFLYHLEDNQVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRGTFEGAKRLGYGARAITEGGWQSVPKLSFPGGA
LMGCAAGFVNVPRIKGSHNAVLSGMLAAEHVAEAIGAGRANDELSSYEQAWRATDIGKDLKKVRNVKPLWSRFGTIVGVG
LGGLDMWLNTLFGNSPFGTLKHGKADYATLEPAAQHKKIAYPKPDGVLTFDRLSSVFLSNTNHEENEPVHLLVADMELQK
RSEHDVFAGPSTRYCPAGVYEWVDKDGNTAADPAAQDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYQGM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=570, Percent_Identity=49.4736842105263, Blast_Score=540, Evalue=1e-154,
Organism=Escherichia coli, GI1787991, Length=329, Percent_Identity=28.8753799392097, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1786227, Length=333, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082155, Length=383, Percent_Identity=25.3263707571802, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25144720, Length=569, Percent_Identity=48.8576449912127, Blast_Score=530, Evalue=1e-150,
Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=44.0972222222222, Blast_Score=458, Evalue=1e-129,
Organism=Drosophila melanogaster, GI24652256, Length=568, Percent_Identity=52.8169014084507, Blast_Score=575, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60220; Mature: 60089

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGGEVGAHILSGAVVDPI
CCCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCHHHHHHCCCEECCC
GIDRLLPGWREEEGHPFKTPVTADHFLVLGPAGSFRLPNILMPPLMNNHGNYIVSLGNVC
CHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCEEEEHHHHH
RWLAGKAEALGVEIYPGFAAAGLLYNEEGAVTGVVTGDMGVEKDGTHGPGFAPGMALMGK
HHHCCCCCEEEEEEECCHHHHCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCC
YVLIGEGARGSLAKQLIAKYKLSDGREPGKYGIGLKELWQVKPENHRPGLVQHSFGWPLD
EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCEE
MKTGGGSFLYHLEDNQVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRGTFEGAKRLGYG
ECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCC
ARAITEGGWQSVPKLSFPGGALMGCAAGFVNVPRIKGSHNAVLSGMLAAEHVAEAIGAGR
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ANDELSSYEQAWRATDIGKDLKKVRNVKPLWSRFGTIVGVGLGGLDMWLNTLFGNSPFGT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC
LKHGKADYATLEPAAQHKKIAYPKPDGVLTFDRLSSVFLSNTNHEENEPVHLLVADMELQ
CCCCCCCCEECCCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCHHH
KRSEHDVFAGPSTRYCPAGVYEWVDKDGNTAADPAAQDVRFVINAQNCVHCKTCDIKDPN
HCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
QNINWVPPQGGEGPVYQGM
CCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
SDIERESMEFDVVIVGAGPAGLAAAIRLKQVNPELSVVVLEKGGEVGAHILSGAVVDPI
CCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCHHHHHHCCCEECCC
GIDRLLPGWREEEGHPFKTPVTADHFLVLGPAGSFRLPNILMPPLMNNHGNYIVSLGNVC
CHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCEEEEHHHHH
RWLAGKAEALGVEIYPGFAAAGLLYNEEGAVTGVVTGDMGVEKDGTHGPGFAPGMALMGK
HHHCCCCCEEEEEEECCHHHHCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCC
YVLIGEGARGSLAKQLIAKYKLSDGREPGKYGIGLKELWQVKPENHRPGLVQHSFGWPLD
EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCEE
MKTGGGSFLYHLEDNQVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRGTFEGAKRLGYG
ECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCC
ARAITEGGWQSVPKLSFPGGALMGCAAGFVNVPRIKGSHNAVLSGMLAAEHVAEAIGAGR
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ANDELSSYEQAWRATDIGKDLKKVRNVKPLWSRFGTIVGVGLGGLDMWLNTLFGNSPFGT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC
LKHGKADYATLEPAAQHKKIAYPKPDGVLTFDRLSSVFLSNTNHEENEPVHLLVADMELQ
CCCCCCCCEECCCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEECCHHH
KRSEHDVFAGPSTRYCPAGVYEWVDKDGNTAADPAAQDVRFVINAQNCVHCKTCDIKDPN
HCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
QNINWVPPQGGEGPVYQGM
CCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]