| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476365
Identifier: 13476365
GI number: 13476365
Start: 6344892
End: 6345662
Strand: Reverse
Name: 13476365
Synonym: mll7663
Alternate gene names: NA
Gene position: 6345662-6344892 (Counterclockwise)
Preceding gene: 13476366
Following gene: 13476364
Centisome position: 90.19
GC content: 63.68
Gene sequence:
>771_bases ATGTCCAGGAAGAAAGTTCTTCTCGCCGGCGAGTCCTGGGTTTCGACCGCGACCCACATCAAGGGCTTCGACCAGTTTCC GACCGTGACCTATCACACCGGCGCCGATGAACTGCTGGCGGCGCTGAAGGATGGTCCGTTCGATGTCACCTTCATGCCGG CGCACGAGGCGCAGCGGAATTTTCCCCAGACCATGGAGACGCTTTCGGCCTATGACGCCGTGGTGCTTTCCGATCTCGGC GCCAACACGCTGTTGCTTCACCCCGACACCTGGGTTCACTCCAAGCCGACGCCGAACCGGCTGCGGCTGCTGCGCGACTA TGTCGGCAATGGCGGCGGTCTGCTGATGTTCGGCGGCTATTACAGCTTCCAGGGCATCAACGGCGGCGCACGCTACCACA AGACGCCGGTCGAGGACGTTCTGCCGGTGACCTGCCTGCCGGTGGACGATCGCGTCGAGGTGCCCGAGGGCTATGCGCCG GTCGTTGTCGGCCCTCAGAGCCATCCGATCCTGAAGGGCCTGGGCAAGGATTGGCCGATCCTGCTCGGCTTCAACGAGGT CATGGTCAAGGAGGGCGCCGAAGTCCTCGCCACCGTGTCCTCCGACTACCATTCCATGCCGCTGCTGGTGACCGGCAAGT ATGGCAAGGGCCGCACCGTCGCCTGGACATCGGATGTCGGGCCGCACTGGCTGCCGCCGGGTTTCATCGCCTGGATTGGC TACAAGACGCTGTTCGAACAGATGCTGGGCTGGGCGACAGCCAGGGATTAG
Upstream 100 bases:
>100_bases CGAGCAATCGGCAATCGACCGCATGCTCATCGACAACCCAAAGACCGTGTTCGCCGCGAGCCTCTGAGCTGCCGGCCACA GCAAAAAACAGGGAGTTTAC
Downstream 100 bases:
>100_bases CCATGCGCGTCCATGTCGTCGGCAATGTCTGCGTCGATACGACGTTTCAGCTGGGCCGCTTTCCGCGGCCTGGCGAGACG TTGAACGCGTCCAGTCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSRKKVLLAGESWVSTATHIKGFDQFPTVTYHTGADELLAALKDGPFDVTFMPAHEAQRNFPQTMETLSAYDAVVLSDLG ANTLLLHPDTWVHSKPTPNRLRLLRDYVGNGGGLLMFGGYYSFQGINGGARYHKTPVEDVLPVTCLPVDDRVEVPEGYAP VVVGPQSHPILKGLGKDWPILLGFNEVMVKEGAEVLATVSSDYHSMPLLVTGKYGKGRTVAWTSDVGPHWLPPGFIAWIG YKTLFEQMLGWATARD
Sequences:
>Translated_256_residues MSRKKVLLAGESWVSTATHIKGFDQFPTVTYHTGADELLAALKDGPFDVTFMPAHEAQRNFPQTMETLSAYDAVVLSDLG ANTLLLHPDTWVHSKPTPNRLRLLRDYVGNGGGLLMFGGYYSFQGINGGARYHKTPVEDVLPVTCLPVDDRVEVPEGYAP VVVGPQSHPILKGLGKDWPILLGFNEVMVKEGAEVLATVSSDYHSMPLLVTGKYGKGRTVAWTSDVGPHWLPPGFIAWIG YKTLFEQMLGWATARD >Mature_255_residues SRKKVLLAGESWVSTATHIKGFDQFPTVTYHTGADELLAALKDGPFDVTFMPAHEAQRNFPQTMETLSAYDAVVLSDLGA NTLLLHPDTWVHSKPTPNRLRLLRDYVGNGGGLLMFGGYYSFQGINGGARYHKTPVEDVLPVTCLPVDDRVEVPEGYAPV VVGPQSHPILKGLGKDWPILLGFNEVMVKEGAEVLATVSSDYHSMPLLVTGKYGKGRTVAWTSDVGPHWLPPGFIAWIGY KTLFEQMLGWATARD
Specific function: Unknown
COG id: COG5426
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28082; Mature: 27951
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKKVLLAGESWVSTATHIKGFDQFPTVTYHTGADELLAALKDGPFDVTFMPAHEAQRN CCCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEECCHHHHHC FPQTMETLSAYDAVVLSDLGANTLLLHPDTWVHSKPTPNRLRLLRDYVGNGGGLLMFGGY CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCE YSFQGINGGARYHKTPVEDVLPVTCLPVDDRVEVPEGYAPVVVGPQSHPILKGLGKDWPI EEECCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCE LLGFNEVMVKEGAEVLATVSSDYHSMPLLVTGKYGKGRTVAWTSDVGPHWLPPGFIAWIG EEECHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHH YKTLFEQMLGWATARD HHHHHHHHHHHHHCCC >Mature Secondary Structure SRKKVLLAGESWVSTATHIKGFDQFPTVTYHTGADELLAALKDGPFDVTFMPAHEAQRN CCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEECCHHHHHC FPQTMETLSAYDAVVLSDLGANTLLLHPDTWVHSKPTPNRLRLLRDYVGNGGGLLMFGGY CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCE YSFQGINGGARYHKTPVEDVLPVTCLPVDDRVEVPEGYAPVVVGPQSHPILKGLGKDWPI EEECCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCE LLGFNEVMVKEGAEVLATVSSDYHSMPLLVTGKYGKGRTVAWTSDVGPHWLPPGFIAWIG EEECHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHH YKTLFEQMLGWATARD HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA