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The map label for this gene is oppC [H]

Identifier: 13476313

GI number: 13476313

Start: 6288989

End: 6290110

Strand: Direct

Name: oppC [H]

Synonym: mlr7599

Alternate gene names: 13476313

Gene position: 6288989-6290110 (Clockwise)

Preceding gene: 13476312

Following gene: 13476314

Centisome position: 89.38

GC content: 62.57

Gene sequence:

>1122_bases
ATGACTGACATCGCAGCCACTGCTCCCGCTATCGTCGGCCGCTCGCTATGGGGCGATGCCTGGGCGCGCCTCAAGGCCAA
CCGCGCCGCCATGTTCAGCCTCTACTACCTCGCCCTGATCGGGCTCGTCAGCGTGTTTGGCCCCTGGTTCGTGCCGCATC
AGTACACGACCATCTATGCCGACTATGTGCGCATGCCGCCAAGCCTGTCAGCCTATCCGAAGCCCGACATGATCGAGTCC
GCGCTCAATGATGCGATCAAGCGCATGCGGGTCGATATCAAGGAATGGCACCAGGAGGGCGATCACGTCTTCGTCACGGT
CAAGTCGACCAAGCCGATCGATGACCGCAACATCCGCTACCTCGACCGCTCCGACGCCTTTGACGACACCAAGATCGAGA
GCAAGTCGCCCGACGGTCTCGAAGTGACGATGAGCGCGTCGGTCAAGCAGCAATATTTCCTGTTCGGCACCGACAACACA
GGCCGCGATCTGCTCTCGCGCACGCTGATGGCCGGGCGCATCTCGCTGGCCATCGGCCTGCTCGCCGGCGTCGTGGCGGT
GGTGATCGGGGTGATCTACGGCGCCGCCGCCGGTTTCTCCGGCGGCAAGATCGACGAGGTGATGATGCGCATCGTCGATG
TGCTCTACTCCTTGCCGTTCATCTTCTTCGTCATCATGCTGGTGGTGTTCTTCGGCCGCAACTTCGTGCTGATGTTCCTG
GCCGTGGGGGCAGTGCTGTGGCTCGACATGGCGCGCATCGTGCGCGGCCAGGCGCTGTCGATCCGCCGCCAGGAATATGT
CCAGGCGGCGGAGGCCATGGGCGTCGGCCAGCGCGGCATCCTGTTGCGCCATGTCATCCCCAATTTGCTGGGTCCGGTGG
TGATCTACATGACCTTGCTGGTGCCGCAGGTCATCATCCTGGAGAGTTTCCTGTCGTTCCTCGGTCTTGGCGTGCAGGAG
CCGATGACCAGTTGGGGCGTGCTGATCTCGGTCGGCGCCAAGAATATCGGTACCGCCAACTGGCTGCTCCTGTTCCCCGC
CTTCTTCCTCGTCTCGACGCTGTTTGCGCTGAATTTCGTCGGCGACGGCCTGCGCGACGCGCTTGACCCAAGGGATCGAT
AA

Upstream 100 bases:

>100_bases
ACGCTGGTGATGGGAACGGTGGTGGTGATCGCCATCTTCACCATCGTGTTCAATCTGATCGTCGACGTCATGTACGCAGT
CGTCGACCCGAGGGTGCGCT

Downstream 100 bases:

>100_bases
GATGGGGACCGCTGACATGGCCACTCCCGAAACGATCCTCAGCGTCAAGGACCTGCGCGTCCGCTTCCGCACGCTAGACG
GCGCGGTCGAAGCGGTGAAG

Product: ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTDIAATAPAIVGRSLWGDAWARLKANRAAMFSLYYLALIGLVSVFGPWFVPHQYTTIYADYVRMPPSLSAYPKPDMIES
ALNDAIKRMRVDIKEWHQEGDHVFVTVKSTKPIDDRNIRYLDRSDAFDDTKIESKSPDGLEVTMSASVKQQYFLFGTDNT
GRDLLSRTLMAGRISLAIGLLAGVVAVVIGVIYGAAAGFSGGKIDEVMMRIVDVLYSLPFIFFVIMLVVFFGRNFVLMFL
AVGAVLWLDMARIVRGQALSIRRQEYVQAAEAMGVGQRGILLRHVIPNLLGPVVIYMTLLVPQVIILESFLSFLGLGVQE
PMTSWGVLISVGAKNIGTANWLLLFPAFFLVSTLFALNFVGDGLRDALDPRDR

Sequences:

>Translated_373_residues
MTDIAATAPAIVGRSLWGDAWARLKANRAAMFSLYYLALIGLVSVFGPWFVPHQYTTIYADYVRMPPSLSAYPKPDMIES
ALNDAIKRMRVDIKEWHQEGDHVFVTVKSTKPIDDRNIRYLDRSDAFDDTKIESKSPDGLEVTMSASVKQQYFLFGTDNT
GRDLLSRTLMAGRISLAIGLLAGVVAVVIGVIYGAAAGFSGGKIDEVMMRIVDVLYSLPFIFFVIMLVVFFGRNFVLMFL
AVGAVLWLDMARIVRGQALSIRRQEYVQAAEAMGVGQRGILLRHVIPNLLGPVVIYMTLLVPQVIILESFLSFLGLGVQE
PMTSWGVLISVGAKNIGTANWLLLFPAFFLVSTLFALNFVGDGLRDALDPRDR
>Mature_372_residues
TDIAATAPAIVGRSLWGDAWARLKANRAAMFSLYYLALIGLVSVFGPWFVPHQYTTIYADYVRMPPSLSAYPKPDMIESA
LNDAIKRMRVDIKEWHQEGDHVFVTVKSTKPIDDRNIRYLDRSDAFDDTKIESKSPDGLEVTMSASVKQQYFLFGTDNTG
RDLLSRTLMAGRISLAIGLLAGVVAVVIGVIYGAAAGFSGGKIDEVMMRIVDVLYSLPFIFFVIMLVVFFGRNFVLMFLA
VGAVLWLDMARIVRGQALSIRRQEYVQAAEAMGVGQRGILLRHVIPNLLGPVVIYMTLLVPQVIILESFLSFLGLGVQEP
MTSWGVLISVGAKNIGTANWLLLFPAFFLVSTLFALNFVGDGLRDALDPRDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=56.4, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787054, Length=310, Percent_Identity=31.9354838709677, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787760, Length=240, Percent_Identity=32.0833333333333, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788505, Length=368, Percent_Identity=28.2608695652174, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789964, Length=218, Percent_Identity=36.2385321100917, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=31.5555555555556, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41270; Mature: 41139

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIAATAPAIVGRSLWGDAWARLKANRAAMFSLYYLALIGLVSVFGPWFVPHQYTTIYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DYVRMPPSLSAYPKPDMIESALNDAIKRMRVDIKEWHQEGDHVFVTVKSTKPIDDRNIRY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEE
LDRSDAFDDTKIESKSPDGLEVTMSASVKQQYFLFGTDNTGRDLLSRTLMAGRISLAIGL
ECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LAGVVAVVIGVIYGAAAGFSGGKIDEVMMRIVDVLYSLPFIFFVIMLVVFFGRNFVLMFL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AVGAVLWLDMARIVRGQALSIRRQEYVQAAEAMGVGQRGILLRHVIPNLLGPVVIYMTLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VPQVIILESFLSFLGLGVQEPMTSWGVLISVGAKNIGTANWLLLFPAFFLVSTLFALNFV
HHHHHHHHHHHHHHCCCHHCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GDGLRDALDPRDR
CCHHHHCCCCCCC
>Mature Secondary Structure 
TDIAATAPAIVGRSLWGDAWARLKANRAAMFSLYYLALIGLVSVFGPWFVPHQYTTIYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
DYVRMPPSLSAYPKPDMIESALNDAIKRMRVDIKEWHQEGDHVFVTVKSTKPIDDRNIRY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEE
LDRSDAFDDTKIESKSPDGLEVTMSASVKQQYFLFGTDNTGRDLLSRTLMAGRISLAIGL
ECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LAGVVAVVIGVIYGAAAGFSGGKIDEVMMRIVDVLYSLPFIFFVIMLVVFFGRNFVLMFL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AVGAVLWLDMARIVRGQALSIRRQEYVQAAEAMGVGQRGILLRHVIPNLLGPVVIYMTLL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VPQVIILESFLSFLGLGVQEPMTSWGVLISVGAKNIGTANWLLLFPAFFLVSTLFALNFV
HHHHHHHHHHHHHHCCCHHCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GDGLRDALDPRDR
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]