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The map label for this gene is glgA

Identifier: 13476305

GI number: 13476305

Start: 6276798

End: 6278243

Strand: Direct

Name: glgA

Synonym: mlr7589

Alternate gene names: 13476305

Gene position: 6276798-6278243 (Clockwise)

Preceding gene: 13476304

Following gene: 13476306

Centisome position: 89.21

GC content: 65.63

Gene sequence:

>1446_bases
ATGCAGGTTCTGTCGGTCACGCCCGAGATCTTCCCGCTGATCAAGACCGGCGGGCTTGCCGACGTGACCGGTGCGCTGCC
CGTCGCGCTGGCAGCCAAGGGCGTGACCATGCGCACGCTCATTCCAGGCTTTCCCGCGGTGATGGAAGGCTTCAAGAAAA
GGAAGGCTGTTTACCAATACCCGCTGCTCCAGGGTGGCAAGGCTTCGATCCATGCTGTCCAGATCGCAGGGCTCGATCTT
TTCGTGCTCGACGCGCCGCATCTCTTCGACCGTCCCGGCGGTCCCTACGGCAATGCTTCGGGCGCCGACTGGCCGGACAA
TTGGCGGCGTTTTGCGGCACTGAGCCAGGCCGGCGCCGATATCGCCGGCGGCGCCATCTCGGGCTACTTGCCCGAGATCG
TCCATGCCCATGACTGGCAGTCGGCGATGACGCTGGCCTATATGCGCTACGGCAAGGCGGTCGGCACGCCGTCGATGATG
ACGGTCCACAATCTCGCCTTCCAGGGCCAGTTCGGCGCAGGCATCTTCGGCGAGCTCGGCCTGCCGGCGGTGGCGATGGC
GCTTGACGGTGTCGAATATTATGGCGGAGTCGGCTTCCTCAAGGCCGGCCTGCAGGCCGCCTGGGCGATCACCACGGTCA
GCCCGACCTATGCGCAGGAAATCCGCTCGCCGGAATTCGGCATGGGCCTCGACGGCCTGATCAACATGCGCTCCAGCGAT
CTCTACGGCATCGTCAACGGCATCGACACCGCCATCTGGGATCCGGAGACGGACAAGCATCTGGTATCGAACTATACGGC
CACCACGCTCAAGGCGCGGGCGCCGAACAGGGCGGCCGTGGAGGAACGCTTCGGCCTCGACCGCGACGACAGCCCGATTG
TCTGCGTCATCAGCCGGCTGACCTGGCAGAAGGGCATGGACATATTGGCGACGGTGATCGACGGCATCGTCGCGACCGGC
GCGCGGCTGGCCATATTGGGCTCGGGCGACGCCGGCCTCGAAGGCGCGCTGCTTGCCGCAGCCGCACGCCACCGTGGCCG
CATCGGCGTGGTCATCGGCTATGACGAAGGGTTGTCGCACACCATGCAGGGCGGCTGCGACGCCATCATCATCCCGTCGC
GCTTCGAACCCTGCGGATTGACGCAGCTCTACGGCCTCCGCTACGGCTGCGTGCCGGTGGTCGCCCGGACCGGCGGCCTA
GCCGACACCATCATCGACGCCAACGAAGCGGCGATGGCGGCCGGCGTGGCCACAGGGCTCCAGTTCGCTCCCAACAATGG
CGGCGCGATGCTGCACGCCATCCGCCGCCTGGTCGATGCCTACGCCGACCCCGCGGCCTTCGAGACCATCCAGCGCCAGG
GCATGAAGGCCGATGTGTCATGGGACAAGAGCGCGGAAAAATATCTTGAACTCTATCGCCTGCTGCTTTCGAAAAGGGTT
GCCTGA

Upstream 100 bases:

>100_bases
ACAAACTCGGGCTCTAGAGCAATTCCGGGAAAAGTGCGAAACGGTTTTCAGTCCGGGAATTGCCTGGAAACAAAGAACTG
GACAGGATCGGGGTAGACGC

Downstream 100 bases:

>100_bases
AGCATGATACGAACCGTCCCCACCAAGCCCTATTCAGACCAGAAGCCCGGCACGTCGGGCCTGCGCAAGAAGGTGCCCGT
GTTCCAGCAGGAGCACTATG

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MQVLSVTPEIFPLIKTGGLADVTGALPVALAAKGVTMRTLIPGFPAVMEGFKKRKAVYQYPLLQGGKASIHAVQIAGLDL
FVLDAPHLFDRPGGPYGNASGADWPDNWRRFAALSQAGADIAGGAISGYLPEIVHAHDWQSAMTLAYMRYGKAVGTPSMM
TVHNLAFQGQFGAGIFGELGLPAVAMALDGVEYYGGVGFLKAGLQAAWAITTVSPTYAQEIRSPEFGMGLDGLINMRSSD
LYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPNRAAVEERFGLDRDDSPIVCVISRLTWQKGMDILATVIDGIVATG
ARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSHTMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGL
ADTIIDANEAAMAAGVATGLQFAPNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLELYRLLLSKRV
A

Sequences:

>Translated_481_residues
MQVLSVTPEIFPLIKTGGLADVTGALPVALAAKGVTMRTLIPGFPAVMEGFKKRKAVYQYPLLQGGKASIHAVQIAGLDL
FVLDAPHLFDRPGGPYGNASGADWPDNWRRFAALSQAGADIAGGAISGYLPEIVHAHDWQSAMTLAYMRYGKAVGTPSMM
TVHNLAFQGQFGAGIFGELGLPAVAMALDGVEYYGGVGFLKAGLQAAWAITTVSPTYAQEIRSPEFGMGLDGLINMRSSD
LYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPNRAAVEERFGLDRDDSPIVCVISRLTWQKGMDILATVIDGIVATG
ARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSHTMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGL
ADTIIDANEAAMAAGVATGLQFAPNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLELYRLLLSKRV
A
>Mature_481_residues
MQVLSVTPEIFPLIKTGGLADVTGALPVALAAKGVTMRTLIPGFPAVMEGFKKRKAVYQYPLLQGGKASIHAVQIAGLDL
FVLDAPHLFDRPGGPYGNASGADWPDNWRRFAALSQAGADIAGGAISGYLPEIVHAHDWQSAMTLAYMRYGKAVGTPSMM
TVHNLAFQGQFGAGIFGELGLPAVAMALDGVEYYGGVGFLKAGLQAAWAITTVSPTYAQEIRSPEFGMGLDGLINMRSSD
LYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPNRAAVEERFGLDRDDSPIVCVISRLTWQKGMDILATVIDGIVATG
ARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSHTMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGL
ADTIIDANEAAMAAGVATGLQFAPNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLELYRLLLSKRV
A

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=480, Percent_Identity=45.8333333333333, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_RHILO (Q985P2)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_107875.1
- ProteinModelPortal:   Q985P2
- SMR:   Q985P2
- GeneID:   1230530
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr7589
- NMPDR:   fig|266835.1.peg.5976
- HOGENOM:   HBG596384
- OMA:   GLTQLCA
- ProtClustDB:   PRK00654
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 50885; Mature: 50885

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLSVTPEIFPLIKTGGLADVTGALPVALAAKGVTMRTLIPGFPAVMEGFKKRKAVYQY
CCCEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHC
PLLQGGKASIHAVQIAGLDLFVLDAPHLFDRPGGPYGNASGADWPDNWRRFAALSQAGAD
CCCCCCCCEEEEEEEECEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
IAGGAISGYLPEIVHAHDWQSAMTLAYMRYGKAVGTPSMMTVHNLAFQGQFGAGIFGELG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCC
LPAVAMALDGVEYYGGVGFLKAGLQAAWAITTVSPTYAQEIRSPEFGMGLDGLINMRSSD
CHHHHHHHCCHHHHCCHHHHHHHHHHEEEEEECCHHHHHHHCCCCCCCCCHHHHCCCCCC
LYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPNRAAVEERFGLDRDDSPIVCVISRL
HHHHHHCCHHHCCCCCCCHHHHHCCHHEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEHH
TWQKGMDILATVIDGIVATGARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSH
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHH
TMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGL
HHCCCCCEEEECCCCCCCCCHHHHHCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHCC
QFAPNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLELYRLLLSKRV
EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MQVLSVTPEIFPLIKTGGLADVTGALPVALAAKGVTMRTLIPGFPAVMEGFKKRKAVYQY
CCCEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHC
PLLQGGKASIHAVQIAGLDLFVLDAPHLFDRPGGPYGNASGADWPDNWRRFAALSQAGAD
CCCCCCCCEEEEEEEECEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
IAGGAISGYLPEIVHAHDWQSAMTLAYMRYGKAVGTPSMMTVHNLAFQGQFGAGIFGELG
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCC
LPAVAMALDGVEYYGGVGFLKAGLQAAWAITTVSPTYAQEIRSPEFGMGLDGLINMRSSD
CHHHHHHHCCHHHHCCHHHHHHHHHHEEEEEECCHHHHHHHCCCCCCCCCHHHHCCCCCC
LYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPNRAAVEERFGLDRDDSPIVCVISRL
HHHHHHCCHHHCCCCCCCHHHHHCCHHEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEHH
TWQKGMDILATVIDGIVATGARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSH
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHH
TMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGL
HHCCCCCEEEECCCCCCCCCHHHHHCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHCC
QFAPNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLELYRLLLSKRV
EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968