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The map label for this gene is fucU [H]

Identifier: 13476297

GI number: 13476297

Start: 6265555

End: 6266001

Strand: Reverse

Name: fucU [H]

Synonym: mll7581

Alternate gene names: 13476297

Gene position: 6266001-6265555 (Counterclockwise)

Preceding gene: 13476298

Following gene: 13476296

Centisome position: 89.06

GC content: 63.76

Gene sequence:

>447_bases
ATGCTGATCGGAATCCCGGCGCTGCTCGGTCCGGACCTTCTGGCGACACTGCGCGCCATGGGCCACGGCGATGAGATCGC
CCTGGTCGACGGAAACTATCCGGCCGAGGAGCAGGCAAAGCGCCTGATCCGGGCCGATGGCCATCATCTCATTCCGGTGC
TCGATGCGATCCTGAGCGTGCTGCCGGTCGACGACGCCGTTCCAGAAGCCCTGTTTCGTGCCTCGGTCAAAGGCAATCCC
TCGATTGCCGATCCAGTCCATCACGAGATCGAGGCGATCTGCGCCAGGCGCGCACCGGGCCGCAAGGTGGTTGCACTGGC
CGGCGCCGACTTCTATGCACGGGTCAAATCGGCGCATGCCATCGTCGCGACAAGCGAGCCCAGGCTTTACGCCAACATCA
TCATCCGCAAGGGCGTGATCTATCCGCCGGAGACCAAGACGCCATGA

Upstream 100 bases:

>100_bases
GGGAACCGTCGGCATTCATGCCCGGGCGCTCGGGGGCGCCAGCCTGCCGCTTTCCGAGCGCTTCCTGATCGGCTCGACGA
CGATTTCCAGGAGCGCCTGA

Downstream 100 bases:

>100_bases
TCCTCTGCTGCGGCGAAGCCCTGATCGACATGCTGCCGCGCATCACGACGCAGGGTGAGCCGGCCTTTGCCCCCTATGTC
GGCGGCGCGGTGTTCAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLIGIPALLGPDLLATLRAMGHGDEIALVDGNYPAEEQAKRLIRADGHHLIPVLDAILSVLPVDDAVPEALFRASVKGNP
SIADPVHHEIEAICARRAPGRKVVALAGADFYARVKSAHAIVATSEPRLYANIIIRKGVIYPPETKTP

Sequences:

>Translated_148_residues
MLIGIPALLGPDLLATLRAMGHGDEIALVDGNYPAEEQAKRLIRADGHHLIPVLDAILSVLPVDDAVPEALFRASVKGNP
SIADPVHHEIEAICARRAPGRKVVALAGADFYARVKSAHAIVATSEPRLYANIIIRKGVIYPPETKTP
>Mature_148_residues
MLIGIPALLGPDLLATLRAMGHGDEIALVDGNYPAEEQAKRLIRADGHHLIPVLDAILSVLPVDDAVPEALFRASVKGNP
SIADPVHHEIEAICARRAPGRKVVALAGADFYARVKSAHAIVATSEPRLYANIIIRKGVIYPPETKTP

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=145, Percent_Identity=42.0689655172414, Blast_Score=98, Evalue=3e-21,
Organism=Homo sapiens, GI148596951, Length=129, Percent_Identity=40.3100775193798, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1789169, Length=139, Percent_Identity=35.2517985611511, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15803; Mature: 15803

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGIPALLGPDLLATLRAMGHGDEIALVDGNYPAEEQAKRLIRADGHHLIPVLDAILSV
CEECCCHHHCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
LPVDDAVPEALFRASVKGNPSIADPVHHEIEAICARRAPGRKVVALAGADFYARVKSAHA
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCEE
IVATSEPRLYANIIIRKGVIYPPETKTP
EEEECCCCEEEEEEEECCEECCCCCCCC
>Mature Secondary Structure
MLIGIPALLGPDLLATLRAMGHGDEIALVDGNYPAEEQAKRLIRADGHHLIPVLDAILSV
CEECCCHHHCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
LPVDDAVPEALFRASVKGNPSIADPVHHEIEAICARRAPGRKVVALAGADFYARVKSAHA
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCEE
IVATSEPRLYANIIIRKGVIYPPETKTP
EEEECCCCEEEEEEEECCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA