Click here to switch to the map view.

The map label for this gene is nagC [C]

Identifier: 13476298

GI number: 13476298

Start: 6266002

End: 6267150

Strand: Reverse

Name: nagC [C]

Synonym: mll7583

Alternate gene names: 13476298

Gene position: 6267150-6266002 (Counterclockwise)

Preceding gene: 13476309

Following gene: 13476297

Centisome position: 89.07

GC content: 65.8

Gene sequence:

>1149_bases
ATGCGCGATCACAACGAGCGGCTGGTGCTCTCGCTGGTGCGCCAGCACGGCAGCCTGGCGAAATCCGACATCGCCCGCAT
GACCGGACTTTCGGCGCAGACGGTTTCGGTCATCATGCGCGAACTCGAGGAAGAAGGCCTGCTCGTGCGCCAGGCGCCGC
TGCGCGGCAAGATCGGCCAGCCCTCCATACCTATGGCGCTCAATCCGGAGGGTGCCTTCTTCATCGGCCTCAAGATCGGC
CGCCGCAGCGCGGAACTGGTGCTGATCGATTTTCTTGGGCAAGTGCGCTCGATGCTGCAGCACTCCTATCGCTATCCGGC
ACCGCGCGAGACGGTTGAATTCGTCACTTCAGGCATGAAAAAGATGCGCGGCGAACTGACACCGGCACAGGACAAGCGCA
TCGCCGGACTCGGCATCGCCATGCCGTTCGAACTGTGGAACTGGGCCGACACCGCCGGTGCGCCGCGCGATGTCATGGAC
GAATGGCGCCACCGCGACATCAGGTCCGACATCCAGGCGCAATGCGATTTTCCGGTCTATCTGCAGAACGACGCCACCTC
GGCATGCGGCGCCGAGCTCGTCTTCGGCCAGGCGGGCGGCGCGCGTGACTTCGTCTATTTCTATATCGGCGCCTTCGCCG
GCGGCGGCATCGTGCTCAACGGCCGGCTGTTCGGCGGGCCAACCGGCAATGCAGGCGCCCTCGGCTCCATGCCGGTGCCC
GGACCGGACGGCAAGCCGACCCAGCTGATCGACGTGGCGTCGATCGCCATGCTGGAAAAAGCCCTCAATGCGCGCGGCGT
CGAGGCCTCGCATCTATGGACCTCGCCGGAGGACTGGGGCGAGATCGGTTCCGAACTCGATGACTGGATCGCCAGCGCCT
CACAGGCGCTCGCCTATGCCATCGTCGCGGCATCCTCGGTCATCGATTTCGAGGCGGCGGTGGTCGACGGCTGGATGCCG
CAGGCGGTGCGCCGTCGGCTGGTCGATGCCATCATCGCGGCCATTGCGACAATCGACGGCGAAGGCCTGAAACTTCCCGC
CGTTCGCGAGGGAACCGTCGGCATTCATGCCCGGGCGCTCGGGGGCGCCAGCCTGCCGCTTTCCGAGCGCTTCCTGATCG
GCTCGACGACGATTTCCAGGAGCGCCTGA

Upstream 100 bases:

>100_bases
GGGAAACGATGGGAGGAACAGGGTGGAGACCGCCACTGCGAGGCACGGTTCGCCCGAAGCGAATGACAGCCTGATTCACC
GCGGCACCAACCAGAGCGGC

Downstream 100 bases:

>100_bases
ATGCTGATCGGAATCCCGGCGCTGCTCGGTCCGGACCTTCTGGCGACACTGCGCGCCATGGGCCACGGCGATGAGATCGC
CCTGGTCGACGGAAACTATC

Product: sugar ABC transporter, ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRDHNERLVLSLVRQHGSLAKSDIARMTGLSAQTVSVIMRELEEEGLLVRQAPLRGKIGQPSIPMALNPEGAFFIGLKIG
RRSAELVLIDFLGQVRSMLQHSYRYPAPRETVEFVTSGMKKMRGELTPAQDKRIAGLGIAMPFELWNWADTAGAPRDVMD
EWRHRDIRSDIQAQCDFPVYLQNDATSACGAELVFGQAGGARDFVYFYIGAFAGGGIVLNGRLFGGPTGNAGALGSMPVP
GPDGKPTQLIDVASIAMLEKALNARGVEASHLWTSPEDWGEIGSELDDWIASASQALAYAIVAASSVIDFEAAVVDGWMP
QAVRRRLVDAIIAAIATIDGEGLKLPAVREGTVGIHARALGGASLPLSERFLIGSTTISRSA

Sequences:

>Translated_382_residues
MRDHNERLVLSLVRQHGSLAKSDIARMTGLSAQTVSVIMRELEEEGLLVRQAPLRGKIGQPSIPMALNPEGAFFIGLKIG
RRSAELVLIDFLGQVRSMLQHSYRYPAPRETVEFVTSGMKKMRGELTPAQDKRIAGLGIAMPFELWNWADTAGAPRDVMD
EWRHRDIRSDIQAQCDFPVYLQNDATSACGAELVFGQAGGARDFVYFYIGAFAGGGIVLNGRLFGGPTGNAGALGSMPVP
GPDGKPTQLIDVASIAMLEKALNARGVEASHLWTSPEDWGEIGSELDDWIASASQALAYAIVAASSVIDFEAAVVDGWMP
QAVRRRLVDAIIAAIATIDGEGLKLPAVREGTVGIHARALGGASLPLSERFLIGSTTISRSA
>Mature_382_residues
MRDHNERLVLSLVRQHGSLAKSDIARMTGLSAQTVSVIMRELEEEGLLVRQAPLRGKIGQPSIPMALNPEGAFFIGLKIG
RRSAELVLIDFLGQVRSMLQHSYRYPAPRETVEFVTSGMKKMRGELTPAQDKRIAGLGIAMPFELWNWADTAGAPRDVMD
EWRHRDIRSDIQAQCDFPVYLQNDATSACGAELVFGQAGGARDFVYFYIGAFAGGGIVLNGRLFGGPTGNAGALGSMPVP
GPDGKPTQLIDVASIAMLEKALNARGVEASHLWTSPEDWGEIGSELDDWIASASQALAYAIVAASSVIDFEAAVVDGWMP
QAVRRRLVDAIIAAIATIDGEGLKLPAVREGTVGIHARALGGASLPLSERFLIGSTTISRSA

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=240, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 40964; Mature: 40964

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHNERLVLSLVRQHGSLAKSDIARMTGLSAQTVSVIMRELEEEGLLVRQAPLRGKIGQ
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC
PSIPMALNPEGAFFIGLKIGRRSAELVLIDFLGQVRSMLQHSYRYPAPRETVEFVTSGMK
CCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMRGELTPAQDKRIAGLGIAMPFELWNWADTAGAPRDVMDEWRHRDIRSDIQAQCDFPVY
HHHCCCCCCCCCEEECCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LQNDATSACGAELVFGQAGGARDFVYFYIGAFAGGGIVLNGRLFGGPTGNAGALGSMPVP
ECCCCCCCCCCEEEEECCCCCCHHHHEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
GPDGKPTQLIDVASIAMLEKALNARGVEASHLWTSPEDWGEIGSELDDWIASASQALAYA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVAASSVIDFEAAVVDGWMPQAVRRRLVDAIIAAIATIDGEGLKLPAVREGTVGIHARAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GGASLPLSERFLIGSTTISRSA
CCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRDHNERLVLSLVRQHGSLAKSDIARMTGLSAQTVSVIMRELEEEGLLVRQAPLRGKIGQ
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC
PSIPMALNPEGAFFIGLKIGRRSAELVLIDFLGQVRSMLQHSYRYPAPRETVEFVTSGMK
CCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMRGELTPAQDKRIAGLGIAMPFELWNWADTAGAPRDVMDEWRHRDIRSDIQAQCDFPVY
HHHCCCCCCCCCEEECCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LQNDATSACGAELVFGQAGGARDFVYFYIGAFAGGGIVLNGRLFGGPTGNAGALGSMPVP
ECCCCCCCCCCEEEEECCCCCCHHHHEEEEHHCCCCEEEEEEEECCCCCCCCCCCCCCCC
GPDGKPTQLIDVASIAMLEKALNARGVEASHLWTSPEDWGEIGSELDDWIASASQALAYA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVAASSVIDFEAAVVDGWMPQAVRRRLVDAIIAAIATIDGEGLKLPAVREGTVGIHARAL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GGASLPLSERFLIGSTTISRSA
CCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]