| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476283
Identifier: 13476283
GI number: 13476283
Start: 6247732
End: 6248958
Strand: Reverse
Name: 13476283
Synonym: mll7563
Alternate gene names: NA
Gene position: 6248958-6247732 (Counterclockwise)
Preceding gene: 13476284
Following gene: 13476268
Centisome position: 88.81
GC content: 57.21
Gene sequence:
>1227_bases ATGACCCCAATAGCCGGATTGCCACGGGCACCGACGCGTCAAGCCATCTTAATCCTGGGAATGCACAGGAGCGGAACCTC GGCGCTTGGGGGCGTCATCAATGCATTGGGAGCAGCCGGGCCGAAGACCCCGCTGCCGTCGCACGCGGCCAATCCGCGTG GATTCTTCGAGAGCGCGCCCCTTTCCCTTGCGCACGACGAACTGCTCGCATCGGTGGGCTCATCCTGGCTCGACTGGCGT CAACTCAAGCCGCAGAGGATTAACTCAGAGGCAACAGAGCCGTATCGTCGGAGAATAAAACAGCTGCTCATCGACGAGTT CGGTTACGAACCGCTGATCGTTATCAAAGACCCGCGGACATGCAGATTTGTTCCGTTCATGTCGTCGATCTTGGACGAAA TGAATGTCAGCCCCGTCGCTCTTCTGCCGATACGCAATCCTCTTGAGGTCGCATATTCGCTGCACCGGAGAGATAAAATG GCGCTGCCAAAGTCACTGCTGTTGTGGCTCAGGCATGTCCTCGAAGCTGAATATCATTCACGACACATGCCGCGATATAT TCTGTCATATGAGGGGTTTCTGGTCGACTGGCGAAAGCATATGGACCGCGCAGCTGAGAAAACCGGTGTCGTCTGGCCTG CTCACCCCGACCGCTCGGACGTCAAGGTCGAGCAGTTTTTGACGACAGACCTTTATCATGAAAGGTCCACGCCCGAAGAT ATGCGTCATCATCCCGAAGTTGCGTCGCTGGTCCGTGAGACCTATCAAATTCTGAGCACGATCGCTGCCGGCGATGAAGA CAATGGCTTGCTTGATCAGCTGGATATTATGCGGACGAGATTTGACGACGCCTGCGAAACATTTTCGGCTGCCATGGCGA CGGAGGAACTGGCGGTTGTGCAACTGCGTGGTGAACTTAGCACGCGCAGCACCGAGACAGAGCGGGCCCGTCAAGAGAAT TCGAAGCTTGCAAGCTTTTTGGAACAGCAATCCCTTGAAGTCCGCGGCCTGGCGGCCGAACGTGATGCCCTCGTCGGAAC CCGCGGCACTCTGATCGCTGAACGGGATGCCCTTGTAAATGCCCAAGCAAGCTTAATCGCCGAACGCGACGCGCTCCTAC GGGACATGAGTTGCATCGCCAATGAGCGCGACGCTCTACTCAGGTCGCGCAGTTGGCGGCTGACCGCACCTTTGCGACTG ATAGGTGGTCTGTTCCCCCGTGGCTGA
Upstream 100 bases:
>100_bases AGCTGCGTTCGTCGCGACCTTCATGGAATTGACGTTTTAGTAGAGCTTGGTCTAAGCGTACTGAACATTAGCCAACCGGA ATGAAAAGCACCTTCAATTG
Downstream 100 bases:
>100_bases CGCCCACGCGGACAGTAAACGCGCGGCGAGAGGCACTTGGAGCCCCTCACGAGCGACTTGCCACGTGAGATAGCTCAGTT TGTTGCACTGCGATCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTPIAGLPRAPTRQAILILGMHRSGTSALGGVINALGAAGPKTPLPSHAANPRGFFESAPLSLAHDELLASVGSSWLDWR QLKPQRINSEATEPYRRRIKQLLIDEFGYEPLIVIKDPRTCRFVPFMSSILDEMNVSPVALLPIRNPLEVAYSLHRRDKM ALPKSLLLWLRHVLEAEYHSRHMPRYILSYEGFLVDWRKHMDRAAEKTGVVWPAHPDRSDVKVEQFLTTDLYHERSTPED MRHHPEVASLVRETYQILSTIAAGDEDNGLLDQLDIMRTRFDDACETFSAAMATEELAVVQLRGELSTRSTETERARQEN SKLASFLEQQSLEVRGLAAERDALVGTRGTLIAERDALVNAQASLIAERDALLRDMSCIANERDALLRSRSWRLTAPLRL IGGLFPRG
Sequences:
>Translated_408_residues MTPIAGLPRAPTRQAILILGMHRSGTSALGGVINALGAAGPKTPLPSHAANPRGFFESAPLSLAHDELLASVGSSWLDWR QLKPQRINSEATEPYRRRIKQLLIDEFGYEPLIVIKDPRTCRFVPFMSSILDEMNVSPVALLPIRNPLEVAYSLHRRDKM ALPKSLLLWLRHVLEAEYHSRHMPRYILSYEGFLVDWRKHMDRAAEKTGVVWPAHPDRSDVKVEQFLTTDLYHERSTPED MRHHPEVASLVRETYQILSTIAAGDEDNGLLDQLDIMRTRFDDACETFSAAMATEELAVVQLRGELSTRSTETERARQEN SKLASFLEQQSLEVRGLAAERDALVGTRGTLIAERDALVNAQASLIAERDALLRDMSCIANERDALLRSRSWRLTAPLRL IGGLFPRG >Mature_407_residues TPIAGLPRAPTRQAILILGMHRSGTSALGGVINALGAAGPKTPLPSHAANPRGFFESAPLSLAHDELLASVGSSWLDWRQ LKPQRINSEATEPYRRRIKQLLIDEFGYEPLIVIKDPRTCRFVPFMSSILDEMNVSPVALLPIRNPLEVAYSLHRRDKMA LPKSLLLWLRHVLEAEYHSRHMPRYILSYEGFLVDWRKHMDRAAEKTGVVWPAHPDRSDVKVEQFLTTDLYHERSTPEDM RHHPEVASLVRETYQILSTIAAGDEDNGLLDQLDIMRTRFDDACETFSAAMATEELAVVQLRGELSTRSTETERARQENS KLASFLEQQSLEVRGLAAERDALVGTRGTLIAERDALVNAQASLIAERDALLRDMSCIANERDALLRSRSWRLTAPLRLI GGLFPRG
Specific function: Unknown
COG id: COG3551
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45851; Mature: 45720
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIAGLPRAPTRQAILILGMHRSGTSALGGVINALGAAGPKTPLPSHAANPRGFFESAP CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LSLAHDELLASVGSSWLDWRQLKPQRINSEATEPYRRRIKQLLIDEFGYEPLIVIKDPRT CHHHHHHHHHHHCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC CRFVPFMSSILDEMNVSPVALLPIRNPLEVAYSLHRRDKMALPKSLLLWLRHVLEAEYHS EEHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RHMPRYILSYEGFLVDWRKHMDRAAEKTGVVWPAHPDRSDVKVEQFLTTDLYHERSTPED HCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH MRHHPEVASLVRETYQILSTIAAGDEDNGLLDQLDIMRTRFDDACETFSAAMATEELAVV HHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QLRGELSTRSTETERARQENSKLASFLEQQSLEVRGLAAERDALVGTRGTLIAERDALVN EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCEEECHHHHHH AQASLIAERDALLRDMSCIANERDALLRSRSWRLTAPLRLIGGLFPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCC >Mature Secondary Structure TPIAGLPRAPTRQAILILGMHRSGTSALGGVINALGAAGPKTPLPSHAANPRGFFESAP CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LSLAHDELLASVGSSWLDWRQLKPQRINSEATEPYRRRIKQLLIDEFGYEPLIVIKDPRT CHHHHHHHHHHHCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC CRFVPFMSSILDEMNVSPVALLPIRNPLEVAYSLHRRDKMALPKSLLLWLRHVLEAEYHS EEHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RHMPRYILSYEGFLVDWRKHMDRAAEKTGVVWPAHPDRSDVKVEQFLTTDLYHERSTPED HCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH MRHHPEVASLVRETYQILSTIAAGDEDNGLLDQLDIMRTRFDDACETFSAAMATEELAVV HHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QLRGELSTRSTETERARQENSKLASFLEQQSLEVRGLAAERDALVGTRGTLIAERDALVN EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCEEECHHHHHH AQASLIAERDALLRDMSCIANERDALLRSRSWRLTAPLRLIGGLFPRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA