| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is wxcX [H]
Identifier: 13476281
GI number: 13476281
Start: 6243553
End: 6245466
Strand: Direct
Name: wxcX [H]
Synonym: mlr7560
Alternate gene names: 13476281
Gene position: 6243553-6245466 (Clockwise)
Preceding gene: 13476280
Following gene: 13476282
Centisome position: 88.74
GC content: 51.83
Gene sequence:
>1914_bases GTGCGTCGTATTGCCGTATTTTCTCTCTACAACGAGCATGGAATTGCCGATGACTATGTCATCTTCCTGCTCGAAAAGCT GCGCGAGTTTGTCGAGAGGATTGTTGTCGTATCCAACGGAAATCTTTCCAAGCTTTCGGAAATAGCAATCAAAGCCAGTT GTGATCAGCTTCTGGTCCGGGAGAACGTGGGATTTGACGTATGGGGATACAAGACCGGTATCGACGCTGTCGGCTTTGAC GCTCTTTCCGAGTATGATGAACTTATCCTGCTGAATGACACTTGCTACGGGCCTCTTTTCCCGTTTTCGGAAATGTTTTC TGAAATGGAGCGCCGGGATTGTGATTTCTGGGGCAGCGCTGCCCATTCGAAAATGACGCCAAATCCGTTTACCGGAACGG GCCATCTGCCTCGCCACCTCACAGCAAACTTCATTGCTGTCCGCGAGAAGATGTTGAAATCACGCGCCTTCAAAACATAC TGGGAAAATCTGCCGGCGATCAAAACTTACATCGACGCTATCATGCTTCACGAGTCGCAGTTTACCAAGCATTTTACAGA TCTTGGCTACTCGGCGGAAGCGTATGTTGATCCGGATAAGTATGGCTCGCACTATCCGGCGTTTATTAACGTGGATGAGA CAATCATCAACCGCTTCCCCTTGCTAAAGCGACGTCCGTTTTTTCATGATCCGACGTTTTTGAATGCTCAAGGCATTGAT TTGCCGCGCGCTTTGCGAGTTCTTGAGGAGACATCCGACTACGACCTCAATCTGATTTGGCGCAATGTCCTGCGCACTTC GGAATTGAGGAATCTAAACACGAATGCCGCGCTGATGAGCGTCTTGCCCGATGAGCGAGCCAAAGACGATGACGCTCCTT CCGACTACGGCAAGATCGCTGTCTGCGCGCATATCTACTACACCGATATGCTGGAAGAGATACTGGCGCTGACCGGCAAC ATCCCGGTTCCCTATGATTTCATTGCCACGACGGATACGCCGGATAAAAAGGCCGAGATTGAAGCCACACTGGCAAAACG CCCTGGCGTGAAGAACGTCATCGTCCGCGTGGTCGAGAAAAATCGCGGTCGTGACATGTCCTCGCTTTTCATTTCCTTGC GCGATCTGCTCGTCGACGACCGTTATGACCTTGTGTGTCGCCTGCATACAAAAAAGTCGCCTCAAGTGCAGGCGTCGAGA AGCAACCTGTTCAAGCGGCATATGCTTGAGAACTTGCTGAATACGCGTGGCTATGTCCACAATGTTTTGGATATGTTTCA CGACAATCCGTCAGTCGGACTAGCCGTTCCGCCTGTCGTTCATATTTCCTATCCGACGATGGGGCACGCATGGTTCTTCA ACAGACCAAAGGTTGAGGAAACCGCGCGGCTTTTGAACATCAAGGTCAAGTTCGATCATGACACCCCGGTGGCTGCCTAT GGCACCATGTTCTGGTTTCGGCCACGCGCCCTGCGCAAGATGTTCGAACACAAGTGGAAATGGGAAGACTTCAATGCCGA GCCAAATCATGTTGACGGCGGCTTGGCTCATGTGCTGGAGCGGCTGATCGCCTATGCGGCTCAGGACGCTGGATATACCA CGCGGCACATCATGTGCGCGCATCAGGCGGCGCACAATTACACCATGCTGGAGTTCAAGCTGCAAAAACTTGCCAGCCTG ATGCCGTCAGGCGACTTTCCGTGGCAGTGCCATTTGTTGTCTGAGTGGAAGAAGGCCGGTTATCCCGTGGCAAACCATCT ACCGTCCGCTCTGTCATCGTCGCAGACGTCGGTAACGTCAGTGAAGCGCTCTCTGGGTAAACTCAATTTGGCCATTAAAA ACTCTCTGTGGTTCAGAGCGCCTACCCTGTTCAAAATACTGAGACCGATCTATCGAGCTGTGGCCAAGCCCTAA
Upstream 100 bases:
>100_bases GCGGCACGAGGGCGATCCTGAAACCGAACTCTCGGCGTAGTGGCGGATGATGGCGAGCATCAGACACGTAAGGTTCACGG TCTAGTCAGGAGCATCAAGG
Downstream 100 bases:
>100_bases AATCAAACTCTAGCCATGGCGAAAACGCCGTGCGCTTTTTCCTGGAAGGCGGGCCTCATATGGCAAGCCGCCGCGTAGAA GATCGCATGTGGCCGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP
Sequences:
>Translated_637_residues MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP >Mature_637_residues MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007739 [H]
Pfam domain/function: PF05045 RgpF [H]
EC number: NA
Molecular weight: Translated: 72974; Mature: 72974
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVR CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHH ENVGFDVWGYKTGIDAVGFDALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSA HCCCCEECCCCCCCCHHCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC AHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTYWENLPAIKTYIDAIMLHESQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID HHHHHHHCCCCCEEEECHHHCCCCCCEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCC LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEE VCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEK HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRSNLFKRHMLENLLNTRGYVH CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH NVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY HHHHHHCCCCCCCEECCCEEEEECCCCCCEEECCCCCHHHHHHEEEEEEEECCCCCHHHH GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCA HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH HQAAHNYTMLEFKLQKLASLMPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTS HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH VKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVR CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHH ENVGFDVWGYKTGIDAVGFDALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSA HCCCCEECCCCCCCCHHCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC AHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTYWENLPAIKTYIDAIMLHESQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID HHHHHHHCCCCCEEEECHHHCCCCCCEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCC LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEE VCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEK HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRSNLFKRHMLENLLNTRGYVH CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH NVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY HHHHHHCCCCCCCEECCCEEEEECCCCCCEEECCCCCHHHHHHEEEEEEEECCCCCHHHH GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCA HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH HQAAHNYTMLEFKLQKLASLMPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTS HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH VKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9385134 [H]