Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is wxcX [H]

Identifier: 13476280

GI number: 13476280

Start: 6241568

End: 6243502

Strand: Direct

Name: wxcX [H]

Synonym: mlr7559

Alternate gene names: 13476280

Gene position: 6241568-6243502 (Clockwise)

Preceding gene: 13476279

Following gene: 13476281

Centisome position: 88.71

GC content: 51.42

Gene sequence:

>1935_bases
ATGCGGCGTGCAGCGATATTTTTCTTCTATGACGAACGCGGCCAGGTTGATGACTATATATTCTACCTTCTAGAAAAATT
GCGGCCATTCGTGGAGACGATTATTTTTGTCTCAAACGGAGAAATTTCACAATCATCGGAGGCTTCACTGCGATCCACCG
TTGACGAGACTATTATCCGTGAGAATACAGGATTTGACGTTGGGGCGTATCGCGACGGGCTCGAGTTCATCGGTTACGAC
AAGCTCGGCGATTATGATGAAATCCTTTTGCTTAACCACACATTCTACGGACCTGTTTTCCCGTTCTCGGAAATGTTTTC
GGAAATGGAACGCCGGGCCTGCGATTTTTGGGGCATATCCGATCACAAGGAGGTAAGCCCCAATCCTTTCACTGGAGCAG
GGGTTTTGCCCCGCCATCTGAACTCTCATTTTATCGCCGTGAGAAAGGCGATGCTTGAGTCGATCGCTTTTCGAAACTAT
TGGGAGAGAATGCCGAAAATCACAGACTATGCGGAGTCTGTTCTCTTGCATGAGTCGCGTTTTACAGGTTTTTTCGAGAA
CCTGGGATACAAATCTGAAACGTATCTTGACTCGGATAAATACAATTCCGCGTATCCTGTGATGATCGATGTCGATCAGA
TTTACAATGATAGAAGCCCAATTTTAAAGCGTCGTCTTTTTTTCAATGATCCAACATTTTTGGATAAGAACGCCGTCGAT
TTGCCGCGTGCTTTGCGGGTGCTGAAAGAGACATCCGACTACGACCTCAATCTGATTTGGCGCAATGTCCTGCGCTCTTC
GGATTTGAGAACCCTCAACACCAATGCGGCGCTGATGAGTGTCTTGCCGGACAAGCGGATTAAAGGCGACGGTGCTGCTG
CCGACTATGGCAAGATCGCTGTCTGCGCGCATATCTACTACACCGATATGCTCGACGAGATACTGGGCCTGACTGGCAAT
ATCCCGGTACCCTATGATTTCATTGCCACCACGAATACGCCGGAGAAAAAGGCCGAAATCGAAACCGCCCTGGCGAACCG
CCCTGGTGTGAAGAACGTCATCGTCCGGGTTGTCGAGCAGAACCGCGGCCGTGACATGTCCTCACTTTTCATCTCCTTGC
GCGATCTGCTGGTCGACGATCGCTATGACCTTGTCTGTCGCCTGCATACAAAAAAATCGCCTCAAGTGCAGTCGTCGATG
GGCAACCTGTTCAAGCGGCATATGGTTGACAATCTGCTGAATAGCCGTGGCTACGTGCACAATGTGTTGGATATGTTTCA
CGACAACCCGTCAGTCGGACTGGCCATTCCGCCTATCTTTCATATCTCATATCCGACCATGGGGTTCTCGTGGTTTGCCA
ACAAGCCAAAGGTTGAGGAAACCGCGCGGCTTTTGAACATCAACGTCAAGTTCGACGAGAACACTCCGGTGGCTGCGTAT
GGTACCATGTTCTGGTTCCGGCCACGCGCCCTGCGCAAAATGTTCGAACACAAGTGGAAATGGGAGGAGTTCAATGCCGA
GCCGGATCATGTCGACGGCGGCTTCGCTCATGCGCTGGAGCGGCTGATCGCCTACGCGGTTCAGAATGCTGGATATACGA
CGCAGCACATCATGTGCGCGCATCAGGCAGAGCACAACTACACCATGCTGGAGTTCAAGCTGCAAAAGCTCGCCAGCTTC
ATGCCGTCAGGGGACTTCCCTTTGCAGTGTCATATGGTGTCTGAGTGGAGAAAGGGCGGCTATCCCTTGGGAAGCCATGT
ATCGGCTACTCCCGCACCAATGCCGACGTCGGTGAAGCATTCTCTGGCAGAACTCAATTTGGCTGTTAAAAGCTCTCTGA
GGTTCAGAGCGCCTATCCTGTTCAGAGCACTACGGCCGATCTATCGCGGCACGAGGGCGATCCTGAAACCGAACTCTCGG
CGTAGTGGCGGATGA

Upstream 100 bases:

>100_bases
ATTATGACATCGTGACAACGGAAGCGTTCTGCCGTCGAGATGCCTCCATGGGAGACGTGGTCCCTATATCACGTGGATCT
GATTTTGCAGGGAATTGGCA

Downstream 100 bases:

>100_bases
TGGCGAGCATCAGACACGTAAGGTTCACGGTCTAGTCAGGAGCATCAAGGGTGCGTCGTATTGCCGTATTTTCTCTCTAC
AACGAGCATGGAATTGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD
KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY
WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD
LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN
IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM
GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY
GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF
MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR
RSGG

Sequences:

>Translated_644_residues
MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD
KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY
WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD
LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN
IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM
GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY
GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF
MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR
RSGG
>Mature_644_residues
MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD
KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY
WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD
LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN
IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM
GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY
GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF
MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR
RSGG

Specific function: Unknown

COG id: COG3754

COG function: function code M; Lipopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007739 [H]

Pfam domain/function: PF05045 RgpF [H]

EC number: NA

Molecular weight: Translated: 73865; Mature: 73865

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIR
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
ENTGFDVGAYRDGLEFIGYDKLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGIS
CCCCCCCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
DHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNYWERMPKITDYAESVLLHESR
CCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCHH
LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCEE
VCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQ
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSMGNLFKRHMVDNLLNSRGYVH
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
NVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY
HHHHHHCCCCCCCEECCCEEEECCCCCCCHHCCCCCCHHHHHEEEEEEEEECCCCCEEEE
GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCA
HHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEH
HQAEHNYTMLEFKLQKLASFMPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKH
HHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSRRSGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure
MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIR
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
ENTGFDVGAYRDGLEFIGYDKLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGIS
CCCCCCCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
DHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNYWERMPKITDYAESVLLHESR
CCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCHH
LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCEE
VCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQ
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSMGNLFKRHMVDNLLNSRGYVH
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
NVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY
HHHHHHCCCCCCCEECCCEEEECCCCCCCHHCCCCCCHHHHHEEEEEEEEECCCCCEEEE
GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCA
HHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEH
HQAEHNYTMLEFKLQKLASFMPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKH
HHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSRRSGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]