| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is wxcX [H]
Identifier: 13476280
GI number: 13476280
Start: 6241568
End: 6243502
Strand: Direct
Name: wxcX [H]
Synonym: mlr7559
Alternate gene names: 13476280
Gene position: 6241568-6243502 (Clockwise)
Preceding gene: 13476279
Following gene: 13476281
Centisome position: 88.71
GC content: 51.42
Gene sequence:
>1935_bases ATGCGGCGTGCAGCGATATTTTTCTTCTATGACGAACGCGGCCAGGTTGATGACTATATATTCTACCTTCTAGAAAAATT GCGGCCATTCGTGGAGACGATTATTTTTGTCTCAAACGGAGAAATTTCACAATCATCGGAGGCTTCACTGCGATCCACCG TTGACGAGACTATTATCCGTGAGAATACAGGATTTGACGTTGGGGCGTATCGCGACGGGCTCGAGTTCATCGGTTACGAC AAGCTCGGCGATTATGATGAAATCCTTTTGCTTAACCACACATTCTACGGACCTGTTTTCCCGTTCTCGGAAATGTTTTC GGAAATGGAACGCCGGGCCTGCGATTTTTGGGGCATATCCGATCACAAGGAGGTAAGCCCCAATCCTTTCACTGGAGCAG GGGTTTTGCCCCGCCATCTGAACTCTCATTTTATCGCCGTGAGAAAGGCGATGCTTGAGTCGATCGCTTTTCGAAACTAT TGGGAGAGAATGCCGAAAATCACAGACTATGCGGAGTCTGTTCTCTTGCATGAGTCGCGTTTTACAGGTTTTTTCGAGAA CCTGGGATACAAATCTGAAACGTATCTTGACTCGGATAAATACAATTCCGCGTATCCTGTGATGATCGATGTCGATCAGA TTTACAATGATAGAAGCCCAATTTTAAAGCGTCGTCTTTTTTTCAATGATCCAACATTTTTGGATAAGAACGCCGTCGAT TTGCCGCGTGCTTTGCGGGTGCTGAAAGAGACATCCGACTACGACCTCAATCTGATTTGGCGCAATGTCCTGCGCTCTTC GGATTTGAGAACCCTCAACACCAATGCGGCGCTGATGAGTGTCTTGCCGGACAAGCGGATTAAAGGCGACGGTGCTGCTG CCGACTATGGCAAGATCGCTGTCTGCGCGCATATCTACTACACCGATATGCTCGACGAGATACTGGGCCTGACTGGCAAT ATCCCGGTACCCTATGATTTCATTGCCACCACGAATACGCCGGAGAAAAAGGCCGAAATCGAAACCGCCCTGGCGAACCG CCCTGGTGTGAAGAACGTCATCGTCCGGGTTGTCGAGCAGAACCGCGGCCGTGACATGTCCTCACTTTTCATCTCCTTGC GCGATCTGCTGGTCGACGATCGCTATGACCTTGTCTGTCGCCTGCATACAAAAAAATCGCCTCAAGTGCAGTCGTCGATG GGCAACCTGTTCAAGCGGCATATGGTTGACAATCTGCTGAATAGCCGTGGCTACGTGCACAATGTGTTGGATATGTTTCA CGACAACCCGTCAGTCGGACTGGCCATTCCGCCTATCTTTCATATCTCATATCCGACCATGGGGTTCTCGTGGTTTGCCA ACAAGCCAAAGGTTGAGGAAACCGCGCGGCTTTTGAACATCAACGTCAAGTTCGACGAGAACACTCCGGTGGCTGCGTAT GGTACCATGTTCTGGTTCCGGCCACGCGCCCTGCGCAAAATGTTCGAACACAAGTGGAAATGGGAGGAGTTCAATGCCGA GCCGGATCATGTCGACGGCGGCTTCGCTCATGCGCTGGAGCGGCTGATCGCCTACGCGGTTCAGAATGCTGGATATACGA CGCAGCACATCATGTGCGCGCATCAGGCAGAGCACAACTACACCATGCTGGAGTTCAAGCTGCAAAAGCTCGCCAGCTTC ATGCCGTCAGGGGACTTCCCTTTGCAGTGTCATATGGTGTCTGAGTGGAGAAAGGGCGGCTATCCCTTGGGAAGCCATGT ATCGGCTACTCCCGCACCAATGCCGACGTCGGTGAAGCATTCTCTGGCAGAACTCAATTTGGCTGTTAAAAGCTCTCTGA GGTTCAGAGCGCCTATCCTGTTCAGAGCACTACGGCCGATCTATCGCGGCACGAGGGCGATCCTGAAACCGAACTCTCGG CGTAGTGGCGGATGA
Upstream 100 bases:
>100_bases ATTATGACATCGTGACAACGGAAGCGTTCTGCCGTCGAGATGCCTCCATGGGAGACGTGGTCCCTATATCACGTGGATCT GATTTTGCAGGGAATTGGCA
Downstream 100 bases:
>100_bases TGGCGAGCATCAGACACGTAAGGTTCACGGTCTAGTCAGGAGCATCAAGGGTGCGTCGTATTGCCGTATTTTCTCTCTAC AACGAGCATGGAATTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR RSGG
Sequences:
>Translated_644_residues MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR RSGG >Mature_644_residues MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIRENTGFDVGAYRDGLEFIGYD KLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNY WERMPKITDYAESVLLHESRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIAVCAHIYYTDMLDEILGLTGN IPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSM GNLFKRHMVDNLLNSRGYVHNVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCAHQAEHNYTMLEFKLQKLASF MPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKHSLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSR RSGG
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007739 [H]
Pfam domain/function: PF05045 RgpF [H]
EC number: NA
Molecular weight: Translated: 73865; Mature: 73865
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIR CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH ENTGFDVGAYRDGLEFIGYDKLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGIS CCCCCCCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC DHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNYWERMPKITDYAESVLLHESR CCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCHH LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIA HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCEE VCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSMGNLFKRHMVDNLLNSRGYVH CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH NVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY HHHHHHCCCCCCCEECCCEEEECCCCCCCHHCCCCCCHHHHHEEEEEEEEECCCCCEEEE GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCA HHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEH HQAEHNYTMLEFKLQKLASFMPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKH HHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHH SLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSRRSGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC >Mature Secondary Structure MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRSTVDETIIR CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH ENTGFDVGAYRDGLEFIGYDKLGDYDEILLLNHTFYGPVFPFSEMFSEMERRACDFWGIS CCCCCCCCCHHCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC DHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNYWERMPKITDYAESVLLHESR CCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNAVD HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCHH LPRALRVLKETSDYDLNLIWRNVLRSSDLRTLNTNAALMSVLPDKRIKGDGAAADYGKIA HHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCEE VCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGVKNVIVRVVEQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSMGNLFKRHMVDNLLNSRGYVH CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH NVLDMFHDNPSVGLAIPPIFHISYPTMGFSWFANKPKVEETARLLNINVKFDENTPVAAY HHHHHHCCCCCCCEECCCEEEECCCCCCCHHCCCCCCHHHHHEEEEEEEEECCCCCEEEE GTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIAYAVQNAGYTTQHIMCA HHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEH HQAEHNYTMLEFKLQKLASFMPSGDFPLQCHMVSEWRKGGYPLGSHVSATPAPMPTSVKH HHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHH SLAELNLAVKSSLRFRAPILFRALRPIYRGTRAILKPNSRRSGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9385134 [H]