| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476275
Identifier: 13476275
GI number: 13476275
Start: 6235926
End: 6237653
Strand: Direct
Name: 13476275
Synonym: mlr7554
Alternate gene names: NA
Gene position: 6235926-6237653 (Clockwise)
Preceding gene: 13476274
Following gene: 13476276
Centisome position: 88.63
GC content: 54.86
Gene sequence:
>1728_bases ATGCCGGCCACCGTTCGCACCCTCTCTATCAGCCGTTCAACCTCCGCTTTCGCGATTGCATCCGTTGGTCCGATCGCGCT GTTCCTGATTGCGCTCATCCTGACGGTGCAGGCGAGAGGTGTTCCGGACAACGACTATTGGACCATTTTCACTTCAATGG CCGGGTCGCTGGACGGGCTGCCGACGTTGTCGGACCTGTATGTAAGGGGAAACGAACATATCATTGCTGGCGCAAAACTG TTTTATCTGCTGAATTTTCATCTTACCGGCGGGGACAATGTTGGTCTGTCCGTCATCGTTGTTGCTTTCTCCCTTGTCAT AGCTTTGACTCTTTCGTGTGCATTCTCCCTCTTTGCACGATCCAGGTTAGAAGCACTTGTCATCGGGATAGCTGTTTCGC TATTTGTGTTCAGCCCACTCGCCGCTCACAATTTCTTTCTGGGCATGAGTGGGATAGCCTGGATCGGGGCAAATCTCTTC ACCGTGCTGGCTGCATTGGCTTTTTGGCGGTCGGCCGAAGAAGACAGGCCGATGGGCTATGTCGTCGCGATAGTATTGGC TGCCATTGCCTCGCAATTTTACAGCACGGGCCTGACTGCATTGTGTGCGATCGGTATCCAAGGATTTTGTGCCGACAAGA CACGGCGGCTCGGTATTTTGCTCTTCGCGGTCGGCTTGGCCTATGTGATTTTGATCGCAGTATTTCAGAAAGTCCCCGAA TATCACGCAGCACGTAATTTCGATCCGACAGAGATTGCCCTGTTCTGCCTGACATTCATTGGTGGCGGCATCGTAACAAC CGAAGCAAATGCAATTCCGCTGGGCGCAATCGGCATTGGAGCAGCGGTTCTGATCGTTGGGTTTTGCCTTTTCCGGCCCG GCGAAAGCAGGTATCGAGCGGCCTTTTGGATTGCGATCATGGCCTACGCGGTCATGTCGAGTGGGTTGGCGGCTATCGGT CGAGGGAATATGGGGGGAGACCAGGCAGCCTTGTCCAGCCGGTATGCAACCCTTCCAGCGCTTTTTTGGATCGGACTGTT CGGGGCAGCTGCTTGTCTGATCTGGCGCGTTGATTTCAATCGTCGTCTGTCGATCGCCATATTCGCGCTAGCAGTCGCGC TGCTCGTAATGAACGGCACGCCACGGGTGATGGACGCTCTTGCCAGGGCTGAAGGAAAAGATTTTGCAACATTGGAACTA TCGCTCGGCGTCAAAGACCCCGACTTGATGCAATACGTTACATCGACTGGGTTTCAGTACTACGCTGTCGAGGACGATCT GAGGAAAGCCAAACATGTCCCGTTCAACGGGAGAGATTTTGGCTGCCCCGCGCTCGGTGCGCAAGTGGCGGTCTCCGACA AGCCGGTGAGTTTGACGGGCTACATTGATATCGTGTCCCAAACACAGGATCCGCGGTGGGCGCGCGTCTTCGGTTGGGCC GCAGACCAGTTGGGCGAACACCCCCCGCTCTTGAACAACGGTCTTCTCAGCACTTATCGTTGTATTGCTTTCCTTGACGG CAACGGAACTGTCGTGGGATTGGGTTTGGGGGGGTTCCATAGGGCCGACGTGGCAAAAGCGCTTGGCCGGACACGTGACG ATTACGGCTGGAGCGGGTATATCGACCTTCAGCGTCTGAACTCCGCTCCGCGACGGATATATGCAGTTTTGCTTACGTCG TCTGGGTGGACAAGATTGCCGGAGCCTGAAATTGGATTTCAGTTTTGA
Upstream 100 bases:
>100_bases AGTATTCCGTCTGTAAAGCCCTCGAATTTCTGGTTGCGCGGTCTGGCAGTGTGTGCGAGGTGCGACCTAACAAAAAGCAC AATCAGCACACGCAGGACTG
Downstream 100 bases:
>100_bases AAAATATCTATGTAGGTGTTGTAAGATTAGCGAGGAAGGTGGCTGATCGCGGCGGATTACTTGCCGTGTTGGAGCGATCG AACAACCGCTTCGTCCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MPATVRTLSISRSTSAFAIASVGPIALFLIALILTVQARGVPDNDYWTIFTSMAGSLDGLPTLSDLYVRGNEHIIAGAKL FYLLNFHLTGGDNVGLSVIVVAFSLVIALTLSCAFSLFARSRLEALVIGIAVSLFVFSPLAAHNFFLGMSGIAWIGANLF TVLAALAFWRSAEEDRPMGYVVAIVLAAIASQFYSTGLTALCAIGIQGFCADKTRRLGILLFAVGLAYVILIAVFQKVPE YHAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESRYRAAFWIAIMAYAVMSSGLAAIG RGNMGGDQAALSSRYATLPALFWIGLFGAAACLIWRVDFNRRLSIAIFALAVALLVMNGTPRVMDALARAEGKDFATLEL SLGVKDPDLMQYVTSTGFQYYAVEDDLRKAKHVPFNGRDFGCPALGAQVAVSDKPVSLTGYIDIVSQTQDPRWARVFGWA ADQLGEHPPLLNNGLLSTYRCIAFLDGNGTVVGLGLGGFHRADVAKALGRTRDDYGWSGYIDLQRLNSAPRRIYAVLLTS SGWTRLPEPEIGFQF
Sequences:
>Translated_575_residues MPATVRTLSISRSTSAFAIASVGPIALFLIALILTVQARGVPDNDYWTIFTSMAGSLDGLPTLSDLYVRGNEHIIAGAKL FYLLNFHLTGGDNVGLSVIVVAFSLVIALTLSCAFSLFARSRLEALVIGIAVSLFVFSPLAAHNFFLGMSGIAWIGANLF TVLAALAFWRSAEEDRPMGYVVAIVLAAIASQFYSTGLTALCAIGIQGFCADKTRRLGILLFAVGLAYVILIAVFQKVPE YHAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESRYRAAFWIAIMAYAVMSSGLAAIG RGNMGGDQAALSSRYATLPALFWIGLFGAAACLIWRVDFNRRLSIAIFALAVALLVMNGTPRVMDALARAEGKDFATLEL SLGVKDPDLMQYVTSTGFQYYAVEDDLRKAKHVPFNGRDFGCPALGAQVAVSDKPVSLTGYIDIVSQTQDPRWARVFGWA ADQLGEHPPLLNNGLLSTYRCIAFLDGNGTVVGLGLGGFHRADVAKALGRTRDDYGWSGYIDLQRLNSAPRRIYAVLLTS SGWTRLPEPEIGFQF >Mature_574_residues PATVRTLSISRSTSAFAIASVGPIALFLIALILTVQARGVPDNDYWTIFTSMAGSLDGLPTLSDLYVRGNEHIIAGAKLF YLLNFHLTGGDNVGLSVIVVAFSLVIALTLSCAFSLFARSRLEALVIGIAVSLFVFSPLAAHNFFLGMSGIAWIGANLFT VLAALAFWRSAEEDRPMGYVVAIVLAAIASQFYSTGLTALCAIGIQGFCADKTRRLGILLFAVGLAYVILIAVFQKVPEY HAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESRYRAAFWIAIMAYAVMSSGLAAIGR GNMGGDQAALSSRYATLPALFWIGLFGAAACLIWRVDFNRRLSIAIFALAVALLVMNGTPRVMDALARAEGKDFATLELS LGVKDPDLMQYVTSTGFQYYAVEDDLRKAKHVPFNGRDFGCPALGAQVAVSDKPVSLTGYIDIVSQTQDPRWARVFGWAA DQLGEHPPLLNNGLLSTYRCIAFLDGNGTVVGLGLGGFHRADVAKALGRTRDDYGWSGYIDLQRLNSAPRRIYAVLLTSS GWTRLPEPEIGFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61652; Mature: 61521
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATVRTLSISRSTSAFAIASVGPIALFLIALILTVQARGVPDNDYWTIFTSMAGSLDGL CCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCC PTLSDLYVRGNEHIIAGAKLFYLLNFHLTGGDNVGLSVIVVAFSLVIALTLSCAFSLFAR CCHHHHEEECCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRLEALVIGIAVSLFVFSPLAAHNFFLGMSGIAWIGANLFTVLAALAFWRSAEEDRPMGY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VVAIVLAAIASQFYSTGLTALCAIGIQGFCADKTRRLGILLFAVGLAYVILIAVFQKVPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH YHAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESRYRA HHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHH AFWIAIMAYAVMSSGLAAIGRGNMGGDQAALSSRYATLPALFWIGLFGAAACLIWRVDFN HHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC RRLSIAIFALAVALLVMNGTPRVMDALARAEGKDFATLELSLGVKDPDLMQYVTSTGFQY CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCEE YAVEDDLRKAKHVPFNGRDFGCPALGAQVAVSDKPVSLTGYIDIVSQTQDPRWARVFGWA EEECHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCHHHHCCHH ADQLGEHPPLLNNGLLSTYRCIAFLDGNGTVVGLGLGGFHRADVAKALGRTRDDYGWSGY HHHCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCE IDLQRLNSAPRRIYAVLLTSSGWTRLPEPEIGFQF EEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PATVRTLSISRSTSAFAIASVGPIALFLIALILTVQARGVPDNDYWTIFTSMAGSLDGL CCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCC PTLSDLYVRGNEHIIAGAKLFYLLNFHLTGGDNVGLSVIVVAFSLVIALTLSCAFSLFAR CCHHHHEEECCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRLEALVIGIAVSLFVFSPLAAHNFFLGMSGIAWIGANLFTVLAALAFWRSAEEDRPMGY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VVAIVLAAIASQFYSTGLTALCAIGIQGFCADKTRRLGILLFAVGLAYVILIAVFQKVPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH YHAARNFDPTEIALFCLTFIGGGIVTTEANAIPLGAIGIGAAVLIVGFCLFRPGESRYRA HHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHH AFWIAIMAYAVMSSGLAAIGRGNMGGDQAALSSRYATLPALFWIGLFGAAACLIWRVDFN HHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC RRLSIAIFALAVALLVMNGTPRVMDALARAEGKDFATLELSLGVKDPDLMQYVTSTGFQY CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCEE YAVEDDLRKAKHVPFNGRDFGCPALGAQVAVSDKPVSLTGYIDIVSQTQDPRWARVFGWA EEECHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCHHHHCCHH ADQLGEHPPLLNNGLLSTYRCIAFLDGNGTVVGLGLGGFHRADVAKALGRTRDDYGWSGY HHHCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCE IDLQRLNSAPRRIYAVLLTSSGWTRLPEPEIGFQF EEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA