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The map label for this gene is yhhW [C]

Identifier: 13476213

GI number: 13476213

Start: 6172584

End: 6173504

Strand: Direct

Name: yhhW [C]

Synonym: mlr7473

Alternate gene names: 13476213

Gene position: 6172584-6173504 (Clockwise)

Preceding gene: 13476212

Following gene: 13476214

Centisome position: 87.73

GC content: 62.65

Gene sequence:

>921_bases
ATGAGCTTCTTTCCCGGGAAAGACCCTGAAGCCGGCGACGCCTTTGCCAGCGACCAGATCGAGTTGATGGTCATCCCGAA
CGCCAAGGACATTGGCGGCTTCGAGGTGCGCCGCGCTCTGCCGACCGCCAAAAGGCGGCTGGTCGGGCCTTTCATCTTCT
TCGACCGCATGGGCCCGGCGATCCTGCGCGCGGGCCAGGCGCTTGACGTCCGTCCGCATCCGCATATCGGGTTGTCGACG
GTGACCTATTTGTTCGACGGCAAGATCCGGCATCGCGATTCACTCGGCACCGAAATGGTCATCCAGCCCGGTGACGTGAA
TTTGATGACCGCCGGCCGCGGCATCGTGCACTCCGAGCGCACGCCGGAGGAATTGCGCGGCGCGCCGATGTCGATCTCCG
GCCTGCAGACATGGCTGGCATTGCCTGACAACAAGGAGGAAGTCGCGCCGGTGTTCGAGAACACCGCTGCCTTGCGGTTG
CCCGAGATCGATGCCGAAGGCGTCCGCGGCCGCATCGTCATCGGGGATTTTCAAGGGTTGCGCTCCCCGGTACGGGCCGA
CACCGAGACGCTTTACGCCGACCTCAGACTGGCGCCTGGCGCCAGCGTGAAGATTGCCGCCGATGCGGAAGAGCGCGCCA
TCTACACGCTAGAAGGCGAGGTTGCGATTTCGGGCGACGTCTTCCCGGCTGAACGGCTGCTGGTGTTCCGGCCCGGTGAT
GAGATCATCATATCGTCGCAAACCGGTGCGCACTTCATGCTGTTCGGTGGCGCCTCGCTCGGCTCGCAGCGCTATATCTG
GTGGAATTTCGTCTCCTCGTCCAAGGAGCGCATCGAACAGGCTAAGCAGGAATGGAAGACGGGCCGCTTCGATATCGTTC
CTGGAGATGAGAAAGAGTTCATCCCGCTGCCGGAAAGCTGA

Upstream 100 bases:

>100_bases
CGCAATCGCGAAGAGGTGGCGGCCAAACTGCGGGCAAAGGCGGCGATCCGCTTTGCCTGATGCGGCCAGAGCGGTCATCG
ACCGCTGACGAGGAGAGTTC

Downstream 100 bases:

>100_bases
GGAAGTCGGCGAGGGGACCTGATTGATCCGCGTCATCGACACGCATTTACTTTCGCCGGCCGGCGGCCTATCTCGCCGTT
GAACAGAAAGCCTGAGCTCC

Product: pirin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSFFPGKDPEAGDAFASDQIELMVIPNAKDIGGFEVRRALPTAKRRLVGPFIFFDRMGPAILRAGQALDVRPHPHIGLST
VTYLFDGKIRHRDSLGTEMVIQPGDVNLMTAGRGIVHSERTPEELRGAPMSISGLQTWLALPDNKEEVAPVFENTAALRL
PEIDAEGVRGRIVIGDFQGLRSPVRADTETLYADLRLAPGASVKIAADAEERAIYTLEGEVAISGDVFPAERLLVFRPGD
EIIISSQTGAHFMLFGGASLGSQRYIWWNFVSSSKERIEQAKQEWKTGRFDIVPGDEKEFIPLPES

Sequences:

>Translated_306_residues
MSFFPGKDPEAGDAFASDQIELMVIPNAKDIGGFEVRRALPTAKRRLVGPFIFFDRMGPAILRAGQALDVRPHPHIGLST
VTYLFDGKIRHRDSLGTEMVIQPGDVNLMTAGRGIVHSERTPEELRGAPMSISGLQTWLALPDNKEEVAPVFENTAALRL
PEIDAEGVRGRIVIGDFQGLRSPVRADTETLYADLRLAPGASVKIAADAEERAIYTLEGEVAISGDVFPAERLLVFRPGD
EIIISSQTGAHFMLFGGASLGSQRYIWWNFVSSSKERIEQAKQEWKTGRFDIVPGDEKEFIPLPES
>Mature_305_residues
SFFPGKDPEAGDAFASDQIELMVIPNAKDIGGFEVRRALPTAKRRLVGPFIFFDRMGPAILRAGQALDVRPHPHIGLSTV
TYLFDGKIRHRDSLGTEMVIQPGDVNLMTAGRGIVHSERTPEELRGAPMSISGLQTWLALPDNKEEVAPVFENTAALRLP
EIDAEGVRGRIVIGDFQGLRSPVRADTETLYADLRLAPGASVKIAADAEERAIYTLEGEVAISGDVFPAERLLVFRPGDE
IIISSQTGAHFMLFGGASLGSQRYIWWNFVSSSKERIEQAKQEWKTGRFDIVPGDEKEFIPLPES

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=283, Percent_Identity=28.9752650176678, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI4505823, Length=283, Percent_Identity=28.9752650176678, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 33643; Mature: 33512

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFPGKDPEAGDAFASDQIELMVIPNAKDIGGFEVRRALPTAKRRLVGPFIFFDRMGPA
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHCCEEEECCCCHH
ILRAGQALDVRPHPHIGLSTVTYLFDGKIRHRDSLGTEMVIQPGDVNLMTAGRGIVHSER
HHHCCCEEECCCCCCCCHHEEEEEECCCEEECCCCCCEEEEECCCEEEEECCCCEEECCC
TPEELRGAPMSISGLQTWLALPDNKEEVAPVFENTAALRLPEIDAEGVRGRIVIGDFQGL
CHHHHCCCCCCHHCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHC
RSPVRADTETLYADLRLAPGASVKIAADAEERAIYTLEGEVAISGDVFPAERLLVFRPGD
CCCCCCCCHHEEEEEEECCCCCEEEEECCCCCEEEEEECCEEEECCCCCCCEEEEECCCC
EIIISSQTGAHFMLFGGASLGSQRYIWWNFVSSSKERIEQAKQEWKTGRFDIVPGDEKEF
CEEEECCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCE
IPLPES
ECCCCC
>Mature Secondary Structure 
SFFPGKDPEAGDAFASDQIELMVIPNAKDIGGFEVRRALPTAKRRLVGPFIFFDRMGPA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHCCEEEECCCCHH
ILRAGQALDVRPHPHIGLSTVTYLFDGKIRHRDSLGTEMVIQPGDVNLMTAGRGIVHSER
HHHCCCEEECCCCCCCCHHEEEEEECCCEEECCCCCCEEEEECCCEEEEECCCCEEECCC
TPEELRGAPMSISGLQTWLALPDNKEEVAPVFENTAALRLPEIDAEGVRGRIVIGDFQGL
CHHHHCCCCCCHHCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCHHC
RSPVRADTETLYADLRLAPGASVKIAADAEERAIYTLEGEVAISGDVFPAERLLVFRPGD
CCCCCCCCHHEEEEEEECCCCCEEEEECCCCCEEEEEECCEEEECCCCCCCEEEEECCCC
EIIISSQTGAHFMLFGGASLGSQRYIWWNFVSSSKERIEQAKQEWKTGRFDIVPGDEKEF
CEEEECCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCE
IPLPES
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]