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The map label for this gene is 13476212

Identifier: 13476212

GI number: 13476212

Start: 6172277

End: 6172543

Strand: Direct

Name: 13476212

Synonym: msr7471

Alternate gene names: NA

Gene position: 6172277-6172543 (Clockwise)

Preceding gene: 13476211

Following gene: 13476213

Centisome position: 87.72

GC content: 59.18

Gene sequence:

>267_bases
ATGTGCAGAAACATCAAGACCCTGTTCAATTTTGATCCGCCGGCAACCAATGACGAAGTCCGCGACGCGGCCCTTCAGTT
CGTCCGCAAGCTGAGCGGAACGACACGGCCGTCGAAACAGAACCAGCATGCGTTTGACCACGCCGTCGAAGCCATTGCGG
CATCGGCGCGAGAGCTTCTCGATTCGCTCGAAACCAACCAGCATCCACGCAATCGCGAAGAGGTGGCGGCCAAACTGCGG
GCAAAGGCGGCGATCCGCTTTGCCTGA

Upstream 100 bases:

>100_bases
AGGCACGGAACAGCCTTACCGGTTTTTGGACACGATCGTGGTTGAGGATTAAGCTCGTCCCGATTGAAACGGCTCCAGGA
CAAGAGGAGATACGGAAGCG

Downstream 100 bases:

>100_bases
TGCGGCCAGAGCGGTCATCGACCGCTGACGAGGAGAGTTCATGAGCTTCTTTCCCGGGAAAGACCCTGAAGCCGGCGACG
CCTTTGCCAGCGACCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MCRNIKTLFNFDPPATNDEVRDAALQFVRKLSGTTRPSKQNQHAFDHAVEAIAASARELLDSLETNQHPRNREEVAAKLR
AKAAIRFA

Sequences:

>Translated_88_residues
MCRNIKTLFNFDPPATNDEVRDAALQFVRKLSGTTRPSKQNQHAFDHAVEAIAASARELLDSLETNQHPRNREEVAAKLR
AKAAIRFA
>Mature_88_residues
MCRNIKTLFNFDPPATNDEVRDAALQFVRKLSGTTRPSKQNQHAFDHAVEAIAASARELLDSLETNQHPRNREEVAAKLR
AKAAIRFA

Specific function: Unknown

COG id: COG5552

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9887; Mature: 9887

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRNIKTLFNFDPPATNDEVRDAALQFVRKLSGTTRPSKQNQHAFDHAVEAIAASARELL
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DSLETNQHPRNREEVAAKLRAKAAIRFA
HHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCRNIKTLFNFDPPATNDEVRDAALQFVRKLSGTTRPSKQNQHAFDHAVEAIAASARELL
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DSLETNQHPRNREEVAAKLRAKAAIRFA
HHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA