| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476208
Identifier: 13476208
GI number: 13476208
Start: 6168917
End: 6169900
Strand: Direct
Name: 13476208
Synonym: mlr7467
Alternate gene names: NA
Gene position: 6168917-6169900 (Clockwise)
Preceding gene: 13476207
Following gene: 13476210
Centisome position: 87.68
GC content: 62.2
Gene sequence:
>984_bases ATGTGGGATTTCGATATCGGCAGGTCGGTGTCCATCATGATGCGGACCTGGCCTTTCATTGTCTTTCGCATGATCATCTA TTTCGGCATCACGCTGGCCTATATCGTGGCGACCGGCACCGGTGCGTCGGTCGGCTATGGCGTCGGCCATATCTCCACCG ATCCCGACGGGCCGATGTCCTTTGCCCTATGGGGCGGCGTGGTCGGCTTTGGCGTCGTCTCGATCGCCGTCTACTGGATC CGCGAATACATCCTCTACGTCGTCAAGGCGGGCCATATCGCCGTCATGGTCCATCTGATCGACGGCCGGGATGTTCCCGA CGGCCAGAACCAGATCGCCTATGCCAGGCAGGTCGTGACCGAGCGTTTCGCCGAGGCCAACATCCTTTTCGTCGTTGACC AGTTGGTCAAGGGCGCCATCCGCGCCATCACCGGCCTGCTCGGCGGCATCGCCGCCTTCCTGCCCATTCCGGGCCTGAGC GGCCTCGTCTCCTTCATCAACACGGTGATCCGCCTGTCGCTCACCTATGTCGACGAGATCATCCTCGGCTACAACATCCG CATCAATTCGTCCTCGCCGTTCGAGACGGCCCGGCAAGGCGTCGTGCTCTACGCGCAGAACGGCAAGACCATGGTCAAGA ACGCCGTCTGGCTGGCGGTCATCATGTGGGGCGTCTCATTCGTCATCTTCCTGCTGATGCTGGCCCCGGCCGCCGCTATT CTTTTCCTCATGCCAGGGCAACTCGCCGGCTGGGCTTTCGTGCTCGCCATCGTCTTTGCCTGGGCCTTCAAGGCCGCGTT CATCGAGCCCTTCGCCATCGCTTGCCTGATGCAGGTTTATTTCAAGACCATCGCCGGCCAAGTGCCTGATCCGGCCTGGG ATATCAGGCTGGCCGAGGCGTCGTCGAAGTTCCGGGAGTTGAAGGACAAAGCGCTGGCCTCCTTCGGCGGCTCGCGCTGG GGCACGGCCGGCGCGACGCACTGA
Upstream 100 bases:
>100_bases ACTAAAACCCCCGTCGGGCGCTCCGCTAATCACAGCCCGCGATTGACAATCCCGGGGGTGAGCGCATCCTTCCCAGCCAT CTCTGAGGGGAGATTCGGGC
Downstream 100 bases:
>100_bases TCGGCGGGATTCGCCTGCGCAGCAGCAACGGTGTTGAGGCGCGCCACCGCCGACTTGAGTGGCGCTTCACCTTGCCCGCA AAAAGTCTCGCTCATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MWDFDIGRSVSIMMRTWPFIVFRMIIYFGITLAYIVATGTGASVGYGVGHISTDPDGPMSFALWGGVVGFGVVSIAVYWI REYILYVVKAGHIAVMVHLIDGRDVPDGQNQIAYARQVVTERFAEANILFVVDQLVKGAIRAITGLLGGIAAFLPIPGLS GLVSFINTVIRLSLTYVDEIILGYNIRINSSSPFETARQGVVLYAQNGKTMVKNAVWLAVIMWGVSFVIFLLMLAPAAAI LFLMPGQLAGWAFVLAIVFAWAFKAAFIEPFAIACLMQVYFKTIAGQVPDPAWDIRLAEASSKFRELKDKALASFGGSRW GTAGATH
Sequences:
>Translated_327_residues MWDFDIGRSVSIMMRTWPFIVFRMIIYFGITLAYIVATGTGASVGYGVGHISTDPDGPMSFALWGGVVGFGVVSIAVYWI REYILYVVKAGHIAVMVHLIDGRDVPDGQNQIAYARQVVTERFAEANILFVVDQLVKGAIRAITGLLGGIAAFLPIPGLS GLVSFINTVIRLSLTYVDEIILGYNIRINSSSPFETARQGVVLYAQNGKTMVKNAVWLAVIMWGVSFVIFLLMLAPAAAI LFLMPGQLAGWAFVLAIVFAWAFKAAFIEPFAIACLMQVYFKTIAGQVPDPAWDIRLAEASSKFRELKDKALASFGGSRW GTAGATH >Mature_327_residues MWDFDIGRSVSIMMRTWPFIVFRMIIYFGITLAYIVATGTGASVGYGVGHISTDPDGPMSFALWGGVVGFGVVSIAVYWI REYILYVVKAGHIAVMVHLIDGRDVPDGQNQIAYARQVVTERFAEANILFVVDQLVKGAIRAITGLLGGIAAFLPIPGLS GLVSFINTVIRLSLTYVDEIILGYNIRINSSSPFETARQGVVLYAQNGKTMVKNAVWLAVIMWGVSFVIFLLMLAPAAAI LFLMPGQLAGWAFVLAIVFAWAFKAAFIEPFAIACLMQVYFKTIAGQVPDPAWDIRLAEASSKFRELKDKALASFGGSRW GTAGATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35604; Mature: 35604
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDFDIGRSVSIMMRTWPFIVFRMIIYFGITLAYIVATGTGASVGYGVGHISTDPDGPMS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH FALWGGVVGFGVVSIAVYWIREYILYVVKAGHIAVMVHLIDGRDVPDGQNQIAYARQVVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH ERFAEANILFVVDQLVKGAIRAITGLLGGIAAFLPIPGLSGLVSFINTVIRLSLTYVDEI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ILGYNIRINSSSPFETARQGVVLYAQNGKTMVKNAVWLAVIMWGVSFVIFLLMLAPAAAI HHCCEEEECCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLMPGQLAGWAFVLAIVFAWAFKAAFIEPFAIACLMQVYFKTIAGQVPDPAWDIRLAEA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH SSKFRELKDKALASFGGSRWGTAGATH HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MWDFDIGRSVSIMMRTWPFIVFRMIIYFGITLAYIVATGTGASVGYGVGHISTDPDGPMS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH FALWGGVVGFGVVSIAVYWIREYILYVVKAGHIAVMVHLIDGRDVPDGQNQIAYARQVVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH ERFAEANILFVVDQLVKGAIRAITGLLGGIAAFLPIPGLSGLVSFINTVIRLSLTYVDEI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ILGYNIRINSSSPFETARQGVVLYAQNGKTMVKNAVWLAVIMWGVSFVIFLLMLAPAAAI HHCCEEEECCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLMPGQLAGWAFVLAIVFAWAFKAAFIEPFAIACLMQVYFKTIAGQVPDPAWDIRLAEA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH SSKFRELKDKALASFGGSRWGTAGATH HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA