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The map label for this gene is 13476168

Identifier: 13476168

GI number: 13476168

Start: 6129990

End: 6131060

Strand: Reverse

Name: 13476168

Synonym: mll7417

Alternate gene names: NA

Gene position: 6131060-6129990 (Counterclockwise)

Preceding gene: 13476170

Following gene: 13476167

Centisome position: 87.14

GC content: 64.52

Gene sequence:

>1071_bases
ATGCGTATCCGTCCAGACCGCAACCGCGGCCGGTCGGCAGGGATCAATCCGTCCGGCCGCTTCGAACCGGTCAGCCGGCA
TGTCTTCGACGATGGCTGGAGTTCGCTGGAGGAACTGCCGCCGTTCAAGACCGAAGTGCAGGTGGAAAAGCCGCGCACCA
TCATCACCCGCAACGAATCGCCCGACATCTCTTTCGACCGGTCGATCAACCCCTATCGCGGCTGCGAACATGGCTGCGTC
TATTGCTTCGCTCGGCCGACGCATGCGTTCATGGGCCTGTCGCCGGGGTTGGATTTCGAAACCAAGCTGTTCGCCAAGCC
GGATGCGGCGCGGCTGCTCGACAAGGAACTGTCCAAGGAGGGCTACCAGCCGCGCACCATCGCCATCGGCACCAACACCG
ATCCCTACCAGCCGATCGAGAAACAGTACCGGATCATGCGCGAGATCCTCGAAGTGCTGGAAGCGCGCGGCCATCCGGTC
GGCATCGTCACCAAATCCGCCCTGGTGACGCGCGACATCGACATCTTGTCGCGCATGGCCGAACGCGGACTGGCCAAGGT
GGCGCTGTCGGTGACGACATTGGACCGCATGCTGGCCAGGACGATGGAGCCCCGCGCGTCGACGCCGACCAAGCGGCTCG
AGGCGATCCGGCAGCTTTCGGATGCCGGCATTCCGACTTCGGTCATGGTGGCGCCGATCATCCCCGGCCTCACCGACCAG
GAGATGGAGCGGATCCTCGATTCGGCCTACGCCGCCGGTGCGCGCGAGGCGGGTTACGTCGTGCTGCGCCTGCCGCTGGA
GGTCAGCCCGATCTTCAAGGACTGGCTGCTGCGCCACTATCCCGACCGCTATCGCCACGTGATGTCGCTGATCCGGTCGA
TGCGCGACGGCAAGGATTACGATTCGGAATGGGGCAAGCGCATGAAGGGCGCCGGGCCCTACGCCTGGCAGATCGGCCGG
CGATTCGAAATCACCGCCAAGCGGCTTGGCCTCAATATCGAACGGCGCACGCTGCGCACCGACCAGTTCGTCGCCGCCGG
AAAGGACCAGGAACAGCTGATGCTGCTCTAA

Upstream 100 bases:

>100_bases
CTGGGAGCGGGCCAAGATGGAACCGATCGTGCGTGCCGACATTGCAGCCTTCGGGGCAGGACGAGCCGAAATGGCCAATG
CGATGATCGAGCAGAGCGGC

Downstream 100 bases:

>100_bases
GACTGCAATTCGCCGCGGCGGTTTGAGCTGCCACGGCAGGAATCCCGTCCGGCCTGCCCCGGCCTGCAGACGGTGCCCTC
CCGGTCCGGCGCCCCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRIRPDRNRGRSAGINPSGRFEPVSRHVFDDGWSSLEELPPFKTEVQVEKPRTIITRNESPDISFDRSINPYRGCEHGCV
YCFARPTHAFMGLSPGLDFETKLFAKPDAARLLDKELSKEGYQPRTIAIGTNTDPYQPIEKQYRIMREILEVLEARGHPV
GIVTKSALVTRDIDILSRMAERGLAKVALSVTTLDRMLARTMEPRASTPTKRLEAIRQLSDAGIPTSVMVAPIIPGLTDQ
EMERILDSAYAAGAREAGYVVLRLPLEVSPIFKDWLLRHYPDRYRHVMSLIRSMRDGKDYDSEWGKRMKGAGPYAWQIGR
RFEITAKRLGLNIERRTLRTDQFVAAGKDQEQLMLL

Sequences:

>Translated_356_residues
MRIRPDRNRGRSAGINPSGRFEPVSRHVFDDGWSSLEELPPFKTEVQVEKPRTIITRNESPDISFDRSINPYRGCEHGCV
YCFARPTHAFMGLSPGLDFETKLFAKPDAARLLDKELSKEGYQPRTIAIGTNTDPYQPIEKQYRIMREILEVLEARGHPV
GIVTKSALVTRDIDILSRMAERGLAKVALSVTTLDRMLARTMEPRASTPTKRLEAIRQLSDAGIPTSVMVAPIIPGLTDQ
EMERILDSAYAAGAREAGYVVLRLPLEVSPIFKDWLLRHYPDRYRHVMSLIRSMRDGKDYDSEWGKRMKGAGPYAWQIGR
RFEITAKRLGLNIERRTLRTDQFVAAGKDQEQLMLL
>Mature_356_residues
MRIRPDRNRGRSAGINPSGRFEPVSRHVFDDGWSSLEELPPFKTEVQVEKPRTIITRNESPDISFDRSINPYRGCEHGCV
YCFARPTHAFMGLSPGLDFETKLFAKPDAARLLDKELSKEGYQPRTIAIGTNTDPYQPIEKQYRIMREILEVLEARGHPV
GIVTKSALVTRDIDILSRMAERGLAKVALSVTTLDRMLARTMEPRASTPTKRLEAIRQLSDAGIPTSVMVAPIIPGLTDQ
EMERILDSAYAAGAREAGYVVLRLPLEVSPIFKDWLLRHYPDRYRHVMSLIRSMRDGKDYDSEWGKRMKGAGPYAWQIGR
RFEITAKRLGLNIERRTLRTDQFVAAGKDQEQLMLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40499; Mature: 40499

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRPDRNRGRSAGINPSGRFEPVSRHVFDDGWSSLEELPPFKTEVQVEKPRTIITRNES
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC
PDISFDRSINPYRGCEHGCVYCFARPTHAFMGLSPGLDFETKLFAKPDAARLLDKELSKE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHC
GYQPRTIAIGTNTDPYQPIEKQYRIMREILEVLEARGHPVGIVTKSALVTRDIDILSRMA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
ERGLAKVALSVTTLDRMLARTMEPRASTPTKRLEAIRQLSDAGIPTSVMVAPIIPGLTDQ
HCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
EMERILDSAYAAGAREAGYVVLRLPLEVSPIFKDWLLRHYPDRYRHVMSLIRSMRDGKDY
HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
DSEWGKRMKGAGPYAWQIGRRFEITAKRLGLNIERRTLRTDQFVAAGKDQEQLMLL
HHHHHHHHCCCCCCHHHCCCEEEEEHHHHCCCHHHHHHCCHHHHCCCCCCCCEECC
>Mature Secondary Structure
MRIRPDRNRGRSAGINPSGRFEPVSRHVFDDGWSSLEELPPFKTEVQVEKPRTIITRNES
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCC
PDISFDRSINPYRGCEHGCVYCFARPTHAFMGLSPGLDFETKLFAKPDAARLLDKELSKE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHC
GYQPRTIAIGTNTDPYQPIEKQYRIMREILEVLEARGHPVGIVTKSALVTRDIDILSRMA
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
ERGLAKVALSVTTLDRMLARTMEPRASTPTKRLEAIRQLSDAGIPTSVMVAPIIPGLTDQ
HCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
EMERILDSAYAAGAREAGYVVLRLPLEVSPIFKDWLLRHYPDRYRHVMSLIRSMRDGKDY
HHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
DSEWGKRMKGAGPYAWQIGRRFEITAKRLGLNIERRTLRTDQFVAAGKDQEQLMLL
HHHHHHHHCCCCCCHHHCCCEEEEEHHHHCCCHHHHHHCCHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]