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The map label for this gene is xylB [H]

Identifier: 13476054

GI number: 13476054

Start: 6005268

End: 6006821

Strand: Direct

Name: xylB [H]

Synonym: mlr7268

Alternate gene names: 13476054

Gene position: 6005268-6006821 (Clockwise)

Preceding gene: 13476053

Following gene: 13476055

Centisome position: 85.35

GC content: 68.47

Gene sequence:

>1554_bases
ATGCGCGACATACTGATCGGCATCGACGCCGGCACCTCCGTCATCAAATCCATCGCCTTCGACACGTTGGGCCGGCAGAT
TGCCGCCGCCGCCTTGCCCAACCACTATGAAACGCTGCCGGGCGGCGGCGCCGAACAGGATCTGGCGCGCACATGGAGCG
ATGCCGCCACGACCTTGCGCCAGCTAGCCGACAAAGTGCCCAATCTCGCCAACCGGACGGTGGCGATCGCGGTGACCGGG
CAAGGCGACGGCACCTGGCTGATCGACGCCAAGGGCGAGCCGGTGGCCAAGGGCTGGCTCTGGCTCGATGCACGTGCCGC
GGCCGTCGTCGAGGAAATCCGCGCGCGGCCCGAGGATCGGCTCCGCTTCGAGAAGACCGGCAGCGGGCTCGCCGCCTGCC
AGCAGGGTTCGCAATTCGTCTTCATGAAGCGCACCATGCCCGCAATGCTCGGCAAGGCGGCAACGGCATTCCACTGCAAG
GACTGGCTCTATTTCAAGCTGACCGGCGAGCGCGCCACCGATCCGTCGGAGGGCACCTTCACCTTCGGCGATTTCCACAC
CCGCGACTACAGCGACGAGGTGCTCGACGTGCTCGGCGTCGCCGATCTCAGGCATCTGCTGCCGCCGATCGTCGACGGCA
CAAGGCACAGCACCGCTCTGTCGCAGGCAGCGGCCGACGCCACCGGGATGCTGGCCGGCACGCCGGTCGTGCTCGGCTAT
GTCGACGTCGTCTGCACCGCGCTCGGCGCCGGGCTGCTGGATCGCCAGCGCAAGCCCGGCTGCTCGATCATCGGCTCCAC
CGGCATGCATATGCGGCTGGCCGAGACACCGGATGACGTGCAGCTGAACGACGCGGCGACCGGCTATACGATGGCGATGC
CGGCGCCCGGCGTGTTCGCGCAGATGCAGTCCAACATGGCGGCGACGCTCAACATCGATTGGGTGCTTGGGCTCGCCTCG
GGCATTCTCGCCTCGCAAGGCATTTCGCGCAGCAATGGCGAGATGATCGCGCTGGTCGATGCCTGGATCGCGGCCGCGCA
GCCGGCCTCGCTGCTCTATCAGCCCTATGTGTCGGAAGCCGGTGAGCGGGGGCCGTTCGTCGACGCCAACGCCCGAGCGG
GGTTCGTCGGCATTTCCTCGCGGCACGGTTATGCTGACCTCGTCCGCGCCGTCTTCGAAGGGTTGGCCTTCGCGGCACGC
GACTGCTACACCGCCATGGGGCCGCTGCCGCGCGAAGTCCGCCTCACCGGCGGCGCGGCCAGAAGCCCGGCGCTGCGCAA
GATCCTGGGTGCGGCGCTGGGTGCCGACATCCGCACCAGCGCGCGCGAGGAGGCGGGCGCGGCGGGCGCGGCGATGATCG
CCGCGGTCTGCGTGGGTCTCTACCCGTCCATGGATGCGTGCGTCGGCGAATGGGTGACGCCGCTGCTTGGTGAAGCCGAG
CCGAGCGACCGGAACCTCGCCGCGATCTACGACAAGATGACCCCGTCCTACACGTTGGCGCACCAGGCGTTGCGGCCGGT
CTGGCGCGCGATGGCTTCAGTGCAGGCAAATTGA

Upstream 100 bases:

>100_bases
ATCTGGGTGCGCCGATCAATGTCAGCATCGATCCGAAAAACCTGCATGTCTTCGACCAGGTGAGCGGCAAGGCGATTTCG
CACGGCATGGAGCTTGCCTG

Downstream 100 bases:

>100_bases
GAAGTCGAGTATGCGTAAGAGAATAGCGATCATTGGCGACAACTTCATGCTTCCGCAGGTGTTTCGCGCCAAAATCGAGA
AGGTCGCTACTGGTGACCTC

Product: xylulose kinase

Products: ADP; L-Xylulose 5-Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MRDILIGIDAGTSVIKSIAFDTLGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLRQLADKVPNLANRTVAIAVTG
QGDGTWLIDAKGEPVAKGWLWLDARAAAVVEEIRARPEDRLRFEKTGSGLAACQQGSQFVFMKRTMPAMLGKAATAFHCK
DWLYFKLTGERATDPSEGTFTFGDFHTRDYSDEVLDVLGVADLRHLLPPIVDGTRHSTALSQAAADATGMLAGTPVVLGY
VDVVCTALGAGLLDRQRKPGCSIIGSTGMHMRLAETPDDVQLNDAATGYTMAMPAPGVFAQMQSNMAATLNIDWVLGLAS
GILASQGISRSNGEMIALVDAWIAAAQPASLLYQPYVSEAGERGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAAR
DCYTAMGPLPREVRLTGGAARSPALRKILGAALGADIRTSAREEAGAAGAAMIAAVCVGLYPSMDACVGEWVTPLLGEAE
PSDRNLAAIYDKMTPSYTLAHQALRPVWRAMASVQAN

Sequences:

>Translated_517_residues
MRDILIGIDAGTSVIKSIAFDTLGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLRQLADKVPNLANRTVAIAVTG
QGDGTWLIDAKGEPVAKGWLWLDARAAAVVEEIRARPEDRLRFEKTGSGLAACQQGSQFVFMKRTMPAMLGKAATAFHCK
DWLYFKLTGERATDPSEGTFTFGDFHTRDYSDEVLDVLGVADLRHLLPPIVDGTRHSTALSQAAADATGMLAGTPVVLGY
VDVVCTALGAGLLDRQRKPGCSIIGSTGMHMRLAETPDDVQLNDAATGYTMAMPAPGVFAQMQSNMAATLNIDWVLGLAS
GILASQGISRSNGEMIALVDAWIAAAQPASLLYQPYVSEAGERGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAAR
DCYTAMGPLPREVRLTGGAARSPALRKILGAALGADIRTSAREEAGAAGAAMIAAVCVGLYPSMDACVGEWVTPLLGEAE
PSDRNLAAIYDKMTPSYTLAHQALRPVWRAMASVQAN
>Mature_517_residues
MRDILIGIDAGTSVIKSIAFDTLGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLRQLADKVPNLANRTVAIAVTG
QGDGTWLIDAKGEPVAKGWLWLDARAAAVVEEIRARPEDRLRFEKTGSGLAACQQGSQFVFMKRTMPAMLGKAATAFHCK
DWLYFKLTGERATDPSEGTFTFGDFHTRDYSDEVLDVLGVADLRHLLPPIVDGTRHSTALSQAAADATGMLAGTPVVLGY
VDVVCTALGAGLLDRQRKPGCSIIGSTGMHMRLAETPDDVQLNDAATGYTMAMPAPGVFAQMQSNMAATLNIDWVLGLAS
GILASQGISRSNGEMIALVDAWIAAAQPASLLYQPYVSEAGERGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAAR
DCYTAMGPLPREVRLTGGAARSPALRKILGAALGADIRTSAREEAGAAGAAMIAAVCVGLYPSMDACVGEWVTPLLGEAE
PSDRNLAAIYDKMTPSYTLAHQALRPVWRAMASVQAN

Specific function: L-lyxose utilization. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1790005, Length=468, Percent_Identity=25.2136752136752, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789987, Length=519, Percent_Identity=27.7456647398844, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787789, Length=482, Percent_Identity=25.3112033195021, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1789168, Length=478, Percent_Identity=23.2217573221757, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.53 [C]

Molecular weight: Translated: 54583; Mature: 54583

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00445 FGGY_KINASES_2 ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDILIGIDAGTSVIKSIAFDTLGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLR
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QLADKVPNLANRTVAIAVTGQGDGTWLIDAKGEPVAKGWLWLDARAAAVVEEIRARPEDR
HHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCHHH
LRFEKTGSGLAACQQGSQFVFMKRTMPAMLGKAATAFHCKDWLYFKLTGERATDPSEGTF
EEEHHCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCE
TFGDFHTRDYSDEVLDVLGVADLRHLLPPIVDGTRHSTALSQAAADATGMLAGTPVVLGY
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
VDVVCTALGAGLLDRQRKPGCSIIGSTGMHMRLAETPDDVQLNDAATGYTMAMPAPGVFA
HHHHHHHHCCHHHHCCCCCCCCEECCCCCEEEECCCCCCCEECCCCCCEEEECCCCCHHH
QMQSNMAATLNIDWVLGLASGILASQGISRSNGEMIALVDAWIAAAQPASLLYQPYVSEA
HHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHC
GERGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAARDCYTAMGPLPREVRLTGGAA
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
RSPALRKILGAALGADIRTSAREEAGAAGAAMIAAVCVGLYPSMDACVGEWVTPLLGEAE
CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PSDRNLAAIYDKMTPSYTLAHQALRPVWRAMASVQAN
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDILIGIDAGTSVIKSIAFDTLGRQIAAAALPNHYETLPGGGAEQDLARTWSDAATTLR
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QLADKVPNLANRTVAIAVTGQGDGTWLIDAKGEPVAKGWLWLDARAAAVVEEIRARPEDR
HHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCHHH
LRFEKTGSGLAACQQGSQFVFMKRTMPAMLGKAATAFHCKDWLYFKLTGERATDPSEGTF
EEEHHCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCCE
TFGDFHTRDYSDEVLDVLGVADLRHLLPPIVDGTRHSTALSQAAADATGMLAGTPVVLGY
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
VDVVCTALGAGLLDRQRKPGCSIIGSTGMHMRLAETPDDVQLNDAATGYTMAMPAPGVFA
HHHHHHHHCCHHHHCCCCCCCCEECCCCCEEEECCCCCCCEECCCCCCEEEECCCCCHHH
QMQSNMAATLNIDWVLGLASGILASQGISRSNGEMIALVDAWIAAAQPASLLYQPYVSEA
HHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHC
GERGPFVDANARAGFVGISSRHGYADLVRAVFEGLAFAARDCYTAMGPLPREVRLTGGAA
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
RSPALRKILGAALGADIRTSAREEAGAAGAAMIAAVCVGLYPSMDACVGEWVTPLLGEAE
CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PSDRNLAAIYDKMTPSYTLAHQALRPVWRAMASVQAN
CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-Xylulose [C]

Specific reaction: ATP + L-Xylulose = ADP + L-Xylulose 5-Phosphate. [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA