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The map label for this gene is ycjP [H]

Identifier: 13476021

GI number: 13476021

Start: 5968862

End: 5969704

Strand: Direct

Name: ycjP [H]

Synonym: mlr7227

Alternate gene names: 13476021

Gene position: 5968862-5969704 (Clockwise)

Preceding gene: 13476020

Following gene: 13476022

Centisome position: 84.83

GC content: 57.65

Gene sequence:

>843_bases
ATGAGGAAAAGGCATACGTCGAAAGACAGGCTGATCACCGTCGCGCTCCATGTAGCGCTAGCAGCGGGACTCTTCTTCGC
GGCATTCCCGATCTACTGGATGCTGAGCAGTTCGTTCAAATCGAATACCGAAATCTTTGCCCTGCCGCCAACCATCCTGC
CAAAGGCCTTCACGCTGGAAGCGTATGCAGCCATCCTCGGCGACCCGGTAAAGCTGCGCTTCTTCTTCAACAGCTATTTC
GTGGCGGGAACGGTAACCGTGCTGACGGTGCTGATCGCCTTGCTGGCGGCCTACGGGTTCAGCCGCTTCAACTTCCGCGG
CAAGGGCAGCCTGAACACACTCATTATCAGCACGCAGACGATTCCGCCGATCACACTTTTGATCCCGTTCTTCGGGCTTG
TCGTCTCATACGGTATCTTCGATACCTATGTCGCACTGATCCTGACTTACCTGGTGTTCACGTTGCCGTACGCGATCCTG
CTGATGACGGGATATCTGAACACCTTGCCCCGCGATCTCGATGAAGCCGTGGCTGTCGATGGCGGCACCAGCTGGACAGC
GCTTTGGCGGGTGATCGTCCCGATTTCGCTGCCTGGTATAGTGGCGACGTCGGTCTACACCTTCCTGTTGTGCTGGAACG
AATTTCTCTTTGCGCTGACGCTGACGAAGTCAACGTCCATGCGCACCGTCCCGATCGGCATCCAGCTGTTGATGGGGCAG
CACGCCTTCGAATGGAACCAGATGATGGCGATGAGCGTGCTCGGCTCGCTCCCGCTCTTGCTGATCTACCTCGTTGCCCA
GCGGTACTTCCTCGCCGGGATGACCGCAGGCTCGGTCAAGTAG

Upstream 100 bases:

>100_bases
ACAACCTGTCACAGGCCTCGGCGAGCGCTGTGGTCATCTTGTTGATCTCTCTCGGCCTGACGCTGTTCTATATTCGCTAT
CAAAAGGCTCGGTAGTAACC

Downstream 100 bases:

>100_bases
GATGTCATTCCCACGGCGACGCAGCGTGGCATCAAGTAATAAGCGGTATCAAGGATTGAAAGCATGAACGTGAAGGACCT
TAAAGTCGGCTGCCAGACCT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRKRHTSKDRLITVALHVALAAGLFFAAFPIYWMLSSSFKSNTEIFALPPTILPKAFTLEAYAAILGDPVKLRFFFNSYF
VAGTVTVLTVLIALLAAYGFSRFNFRGKGSLNTLIISTQTIPPITLLIPFFGLVVSYGIFDTYVALILTYLVFTLPYAIL
LMTGYLNTLPRDLDEAVAVDGGTSWTALWRVIVPISLPGIVATSVYTFLLCWNEFLFALTLTKSTSMRTVPIGIQLLMGQ
HAFEWNQMMAMSVLGSLPLLLIYLVAQRYFLAGMTAGSVK

Sequences:

>Translated_280_residues
MRKRHTSKDRLITVALHVALAAGLFFAAFPIYWMLSSSFKSNTEIFALPPTILPKAFTLEAYAAILGDPVKLRFFFNSYF
VAGTVTVLTVLIALLAAYGFSRFNFRGKGSLNTLIISTQTIPPITLLIPFFGLVVSYGIFDTYVALILTYLVFTLPYAIL
LMTGYLNTLPRDLDEAVAVDGGTSWTALWRVIVPISLPGIVATSVYTFLLCWNEFLFALTLTKSTSMRTVPIGIQLLMGQ
HAFEWNQMMAMSVLGSLPLLLIYLVAQRYFLAGMTAGSVK
>Mature_280_residues
MRKRHTSKDRLITVALHVALAAGLFFAAFPIYWMLSSSFKSNTEIFALPPTILPKAFTLEAYAAILGDPVKLRFFFNSYF
VAGTVTVLTVLIALLAAYGFSRFNFRGKGSLNTLIISTQTIPPITLLIPFFGLVVSYGIFDTYVALILTYLVFTLPYAIL
LMTGYLNTLPRDLDEAVAVDGGTSWTALWRVIVPISLPGIVATSVYTFLLCWNEFLFALTLTKSTSMRTVPIGIQLLMGQ
HAFEWNQMMAMSVLGSLPLLLIYLVAQRYFLAGMTAGSVK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=278, Percent_Identity=34.5323741007194, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=28.8372093023256, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789860, Length=271, Percent_Identity=25.4612546125461, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30972; Mature: 30972

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50928 ABC_TM1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRHTSKDRLITVALHVALAAGLFFAAFPIYWMLSSSFKSNTEIFALPPTILPKAFTLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCHHHHH
AYAAILGDPVKLRFFFNSYFVAGTVTVLTVLIALLAAYGFSRFNFRGKGSLNTLIISTQT
HHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCC
IPPITLLIPFFGLVVSYGIFDTYVALILTYLVFTLPYAILLMTGYLNTLPRDLDEAVAVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GGTSWTALWRVIVPISLPGIVATSVYTFLLCWNEFLFALTLTKSTSMRTVPIGIQLLMGQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECHHHHHHHCC
HAFEWNQMMAMSVLGSLPLLLIYLVAQRYFLAGMTAGSVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKRHTSKDRLITVALHVALAAGLFFAAFPIYWMLSSSFKSNTEIFALPPTILPKAFTLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCHHHHH
AYAAILGDPVKLRFFFNSYFVAGTVTVLTVLIALLAAYGFSRFNFRGKGSLNTLIISTQT
HHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCC
IPPITLLIPFFGLVVSYGIFDTYVALILTYLVFTLPYAILLMTGYLNTLPRDLDEAVAVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GGTSWTALWRVIVPISLPGIVATSVYTFLLCWNEFLFALTLTKSTSMRTVPIGIQLLMGQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECHHHHHHHCC
HAFEWNQMMAMSVLGSLPLLLIYLVAQRYFLAGMTAGSVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]