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The map label for this gene is glcD [H]

Identifier: 13475985

GI number: 13475985

Start: 5932125

End: 5933528

Strand: Direct

Name: glcD [H]

Synonym: mlr7184

Alternate gene names: 13475985

Gene position: 5932125-5933528 (Clockwise)

Preceding gene: 13475983

Following gene: 13475994

Centisome position: 84.31

GC content: 67.95

Gene sequence:

>1404_bases
ATGTCGCCTGAAACGCAACGGCTTCTCTCCGCCCTTGGCGATCGGCTGGGCGCGGGCGGCGTGCTTGCCGGTTCCGATGT
CGACCAGCGCTATCGCGACGATCCCGACGGCAAGCTTGGCGTACTGCCCGAAGTGGTGCTGCGTCCGCGCGATGCCGTTG
GTGTCGCGGCAGCGCTCGCCGGCTGCCACGCTGTCGGCCAGCCGGTCGTCGTCCAGGGCGGACGCACCGGGCTGGCCGGC
GGCACGCGGGTCCAGCCCGGCGAGATCGTGCTGTCGCTGGAGCGTATGAGCGGCCTCGCCGCTCCGGACACCCAAGCCGC
CAGTATTGTCGCCGAAGCGGGTGCGACGCTGCAGGCGGTGCAGGAGGCGGCCGACGACGCCGGGCTGATGTTCGGTGTCG
ATATCGGCGCGCGCGGCTCGGCTACGGTCGGGGGCAACATCGCCACCAATGCCGGCGGCATCCGCGTGCTGCGTTATGGC
ATGTACCGCGCACAGGTGCTTGGGCTGGAGGCCGTGCTGGCCGACGGCAGCGTGCTGTCCTCGCTGAAGGGCCTGCCCAA
GGACAATTCCGGCTACGACCTCGGCCAACTCTTCATCGGCGCGGAAGGGACGCTCGGCGTCGTCACCCGCGCCGCGCTCC
GGCTGCATCCGAAGCCGGCCTCCGAGGTGAACGCCTTCTGCGCGCTCGCTTCGCTCGACGCGGCGATCGCCTTGCTCGGA
CTGCTGCGGCAAAGGCTCGGTCCGTTATTGTCGGCCTATGAGGTGAATTTCGCACCGCTCTATGACGTGATGGCTGCCAG
CATGGCCATGCCCGCGCCGTTGCCTGTGGGCTCACCCGTCTATGTGCTGGCCGAAATCCAGGGCAACGAGCCCGAGCGCG
ACGGCGAGCGCTTCGCCGAGGTTCTCATGCAGGCGGTCGAGGATGGCGTGGTCGACGATGTCGTCGTCTCGCAGTCGCCG
CGTGAATTCCGGGCGCTCTGGGACGTGCGGGAGGACGCCAATCGCGTTCTGTTTTCGATCAAAGGCCTGATCGGCGTCGA
CATCAGCATCCCGCTGGCGCGCATGGGCGCGTTCCTGCAAGAAGCCGACGCCGCCATCCATGCCGTCGATCCCAGCGCCG
ACATCTATGTCTTCGGCCATCTCGGCGACGGCAATCTGCACTATCAGGTGCTGACGGCGGATCCGGCGGCCGCCTACGGC
ATCGTCTATCGCGGCGTGGCGGCGGCCGGAGGCGGCGTTTCGGCCGAGCATGGCATCGGCCTCGATAAGAAACAGTGGCT
GCATCTGGTGCGCAGCGACGCCGAGATCGCCACGATGCGGCGGCTGAAGACGGCGCTCGACCCGAAGAACATCCTTAATC
CGGGACGTGTCTTCGACCTCGATCCAGCTGCCGTCCCCCGATGA

Upstream 100 bases:

>100_bases
GCAATTGAAGGATGGCGAGCGTGTCGGACGGAAATACTCATCGGCCCATCCGGTCGCGGGACGCGGACGACGCGCTTCGC
CACGCAGGCGCCTGAGCCCG

Downstream 100 bases:

>100_bases
CAAATGTCGTCCTGTAGGCCGGCAGTCAGCTCCGCTCCGTCGCCATCTGCCTGGGGATCAGAAAACGGGCGGCAAGCACG
CAGAGCAGCACGGTGAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSPETQRLLSALGDRLGAGGVLAGSDVDQRYRDDPDGKLGVLPEVVLRPRDAVGVAAALAGCHAVGQPVVVQGGRTGLAG
GTRVQPGEIVLSLERMSGLAAPDTQAASIVAEAGATLQAVQEAADDAGLMFGVDIGARGSATVGGNIATNAGGIRVLRYG
MYRAQVLGLEAVLADGSVLSSLKGLPKDNSGYDLGQLFIGAEGTLGVVTRAALRLHPKPASEVNAFCALASLDAAIALLG
LLRQRLGPLLSAYEVNFAPLYDVMAASMAMPAPLPVGSPVYVLAEIQGNEPERDGERFAEVLMQAVEDGVVDDVVVSQSP
REFRALWDVREDANRVLFSIKGLIGVDISIPLARMGAFLQEADAAIHAVDPSADIYVFGHLGDGNLHYQVLTADPAAAYG
IVYRGVAAAGGGVSAEHGIGLDKKQWLHLVRSDAEIATMRRLKTALDPKNILNPGRVFDLDPAAVPR

Sequences:

>Translated_467_residues
MSPETQRLLSALGDRLGAGGVLAGSDVDQRYRDDPDGKLGVLPEVVLRPRDAVGVAAALAGCHAVGQPVVVQGGRTGLAG
GTRVQPGEIVLSLERMSGLAAPDTQAASIVAEAGATLQAVQEAADDAGLMFGVDIGARGSATVGGNIATNAGGIRVLRYG
MYRAQVLGLEAVLADGSVLSSLKGLPKDNSGYDLGQLFIGAEGTLGVVTRAALRLHPKPASEVNAFCALASLDAAIALLG
LLRQRLGPLLSAYEVNFAPLYDVMAASMAMPAPLPVGSPVYVLAEIQGNEPERDGERFAEVLMQAVEDGVVDDVVVSQSP
REFRALWDVREDANRVLFSIKGLIGVDISIPLARMGAFLQEADAAIHAVDPSADIYVFGHLGDGNLHYQVLTADPAAAYG
IVYRGVAAAGGGVSAEHGIGLDKKQWLHLVRSDAEIATMRRLKTALDPKNILNPGRVFDLDPAAVPR
>Mature_466_residues
SPETQRLLSALGDRLGAGGVLAGSDVDQRYRDDPDGKLGVLPEVVLRPRDAVGVAAALAGCHAVGQPVVVQGGRTGLAGG
TRVQPGEIVLSLERMSGLAAPDTQAASIVAEAGATLQAVQEAADDAGLMFGVDIGARGSATVGGNIATNAGGIRVLRYGM
YRAQVLGLEAVLADGSVLSSLKGLPKDNSGYDLGQLFIGAEGTLGVVTRAALRLHPKPASEVNAFCALASLDAAIALLGL
LRQRLGPLLSAYEVNFAPLYDVMAASMAMPAPLPVGSPVYVLAEIQGNEPERDGERFAEVLMQAVEDGVVDDVVVSQSPR
EFRALWDVREDANRVLFSIKGLIGVDISIPLARMGAFLQEADAAIHAVDPSADIYVFGHLGDGNLHYQVLTADPAAAYGI
VYRGVAAAGGGVSAEHGIGLDKKQWLHLVRSDAEIATMRRLKTALDPKNILNPGRVFDLDPAAVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=452, Percent_Identity=36.283185840708, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI37595756, Length=467, Percent_Identity=30.8351177730193, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI37595754, Length=490, Percent_Identity=29.5918367346939, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI4501993, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1789351, Length=431, Percent_Identity=29.2343387470998, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI48994907, Length=467, Percent_Identity=23.982869379015, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17534361, Length=423, Percent_Identity=31.2056737588652, Blast_Score=208, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI71992373, Length=483, Percent_Identity=28.7784679089027, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI71992381, Length=483, Percent_Identity=27.7432712215321, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71992392, Length=402, Percent_Identity=28.8557213930348, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17556096, Length=195, Percent_Identity=25.1282051282051, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320023, Length=440, Percent_Identity=34.0909090909091, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6320764, Length=426, Percent_Identity=32.3943661971831, Blast_Score=224, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6320027, Length=437, Percent_Identity=29.0617848970252, Blast_Score=167, Evalue=4e-42,
Organism=Drosophila melanogaster, GI18921117, Length=424, Percent_Identity=37.0283018867925, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24639277, Length=424, Percent_Identity=37.0283018867925, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24639275, Length=424, Percent_Identity=37.0283018867925, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24653753, Length=218, Percent_Identity=25.6880733944954, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 48509; Mature: 48378

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPETQRLLSALGDRLGAGGVLAGSDVDQRYRDDPDGKLGVLPEVVLRPRDAVGVAAALA
CCCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHH
GCHAVGQPVVVQGGRTGLAGGTRVQPGEIVLSLERMSGLAAPDTQAASIVAEAGATLQAV
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHCCHHHHHH
QEAADDAGLMFGVDIGARGSATVGGNIATNAGGIRVLRYGMYRAQVLGLEAVLADGSVLS
HHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH
SLKGLPKDNSGYDLGQLFIGAEGTLGVVTRAALRLHPKPASEVNAFCALASLDAAIALLG
HHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLRQRLGPLLSAYEVNFAPLYDVMAASMAMPAPLPVGSPVYVLAEIQGNEPERDGERFAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
VLMQAVEDGVVDDVVVSQSPREFRALWDVREDANRVLFSIKGLIGVDISIPLARMGAFLQ
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHEEECCCCCHHHHHHHHH
EADAAIHAVDPSADIYVFGHLGDGNLHYQVLTADPAAAYGIVYRGVAAAGGGVSAEHGIG
HHCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
LDKKQWLHLVRSDAEIATMRRLKTALDPKNILNPGRVFDLDPAAVPR
CCHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SPETQRLLSALGDRLGAGGVLAGSDVDQRYRDDPDGKLGVLPEVVLRPRDAVGVAAALA
CCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHH
GCHAVGQPVVVQGGRTGLAGGTRVQPGEIVLSLERMSGLAAPDTQAASIVAEAGATLQAV
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHCCHHHHHH
QEAADDAGLMFGVDIGARGSATVGGNIATNAGGIRVLRYGMYRAQVLGLEAVLADGSVLS
HHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH
SLKGLPKDNSGYDLGQLFIGAEGTLGVVTRAALRLHPKPASEVNAFCALASLDAAIALLG
HHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLRQRLGPLLSAYEVNFAPLYDVMAASMAMPAPLPVGSPVYVLAEIQGNEPERDGERFAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
VLMQAVEDGVVDDVVVSQSPREFRALWDVREDANRVLFSIKGLIGVDISIPLARMGAFLQ
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEHHHEEECCCCCHHHHHHHHH
EADAAIHAVDPSADIYVFGHLGDGNLHYQVLTADPAAAYGIVYRGVAAAGGGVSAEHGIG
HHCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
LDKKQWLHLVRSDAEIATMRRLKTALDPKNILNPGRVFDLDPAAVPR
CCHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]