| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475982
Identifier: 13475982
GI number: 13475982
Start: 5930172
End: 5930603
Strand: Direct
Name: 13475982
Synonym: mlr7181
Alternate gene names: NA
Gene position: 5930172-5930603 (Clockwise)
Preceding gene: 13475981
Following gene: 13475983
Centisome position: 84.28
GC content: 63.43
Gene sequence:
>432_bases ATGAACGCCAGCAACCCGGCGCTGTTTTCGCAGGCCAGCGCCGAGGTTATCGGCCTGCATCGCTTCTTCGTCGACTGGTT CGTCGCCGCGCGAGCCGACACGGTGGACTTCACGCGCTTCGAAGGCGTCATGGGCGAAGGCTTGACCATGATCGCACCGA GCGGCCAGATCCTCGACCGTGACGCTGTGATCGATCATGTCCGCTCAAGCCGCGCCACATGCGACGACGGGTTTGCCATT TCGATCGAGGATATCAGGCCCGGTTGGCAAACCGAGGACACCATCGTCGTCCTTTACGTCGAGGCGCAGTTGCGCGCGGG CAAGCACAGCCGCCGTCAGTCGAGCGCCGTCTTCACCACCAGTTCATCGGCGCCCAACGGCGTCGAATGGCGACACCTGC ATGAAACCTGGCTGCAGGTGCCGGAACGCTGA
Upstream 100 bases:
>100_bases CGCAAAGCCAAGGTCCCCTTGGCGACGTCTACACGCTGGAGCGCGACCGTCACGGCCGCCACGGCTCGATCATGCATTAC AATTTGAACGCAGGCCGCAC
Downstream 100 bases:
>100_bases ACAGGCTCCAGAGATCAATTTAGTGCGAGTAACGAAAGGGGAACAACAATGAGAAAGACGATACTCCAACTCACCACCGC GCTTGCTCTCGTCACGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNASNPALFSQASAEVIGLHRFFVDWFVAARADTVDFTRFEGVMGEGLTMIAPSGQILDRDAVIDHVRSSRATCDDGFAI SIEDIRPGWQTEDTIVVLYVEAQLRAGKHSRRQSSAVFTTSSSAPNGVEWRHLHETWLQVPER
Sequences:
>Translated_143_residues MNASNPALFSQASAEVIGLHRFFVDWFVAARADTVDFTRFEGVMGEGLTMIAPSGQILDRDAVIDHVRSSRATCDDGFAI SIEDIRPGWQTEDTIVVLYVEAQLRAGKHSRRQSSAVFTTSSSAPNGVEWRHLHETWLQVPER >Mature_143_residues MNASNPALFSQASAEVIGLHRFFVDWFVAARADTVDFTRFEGVMGEGLTMIAPSGQILDRDAVIDHVRSSRATCDDGFAI SIEDIRPGWQTEDTIVVLYVEAQLRAGKHSRRQSSAVFTTSSSAPNGVEWRHLHETWLQVPER
Specific function: Unknown
COG id: COG4460
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15919; Mature: 15919
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASNPALFSQASAEVIGLHRFFVDWFVAARADTVDFTRFEGVMGEGLTMIAPSGQILDR CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCEECH DAVIDHVRSSRATCDDGFAISIEDIRPGWQTEDTIVVLYVEAQLRAGKHSRRQSSAVFTT HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEE SSSAPNGVEWRHLHETWLQVPER CCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MNASNPALFSQASAEVIGLHRFFVDWFVAARADTVDFTRFEGVMGEGLTMIAPSGQILDR CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCEECH DAVIDHVRSSRATCDDGFAISIEDIRPGWQTEDTIVVLYVEAQLRAGKHSRRQSSAVFTT HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEE SSSAPNGVEWRHLHETWLQVPER CCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA