| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475979
Identifier: 13475979
GI number: 13475979
Start: 5928280
End: 5928768
Strand: Direct
Name: 13475979
Synonym: mlr7178
Alternate gene names: NA
Gene position: 5928280-5928768 (Clockwise)
Preceding gene: 13475978
Following gene: 13475980
Centisome position: 84.26
GC content: 65.03
Gene sequence:
>489_bases ATGAACAAGCCGGCTATCAGGATCACCGAACCGAGCTCGAAGCTTTCCGTGACGGCGCTGCTGCTGCCCGAAAAGGCGCC GGAAAACGTGGCTTTCCTTTTGGCGTATCTCACCGCCCCACGCGTGGTCCCCGGCATCCATGCCATGTGGACGGGACCTG AGATTTCCTGCCCGGTTCCATCAGCTGATCTCGATGGCCAGTCCTATGCCAGGCCATTGCCGGCGGAGAACGCGACGCTG ACGCCGCAGCCCGGCGACATTGTGCTGTCCTACGTGCCGCCGCGCATGTGGGGTGGCAACCCCAATGCCATTTTCGACAT CGGCCTCTATTACGGGCAGGGCGCGCGGCTTCTGTTCCCGATCGGCTGGCTGGCCGGCAGCGTGGTGGCGCAGGTGCTGC CGCAGGAGCGTGAGCAGTTCGCTGCCGCCTGTGGCGTCATCCGCCGCAACGGCGCCTGCGACATCACCTTCAGCCTGGTG GAGGCCTGA
Upstream 100 bases:
>100_bases AGGATGCGCAAGCGGCGCGCGAGGCGCTGGTGGCCGATATCAGCCGGCCTTTTGCCTTCCTGCGCGACAAGCTTCAATCC GCCGCCGCGAAAGACCACAC
Downstream 100 bases:
>100_bases CATGGCCGACGACAGTTTCGAGCTCTTCGACCTTCGCGTCGAGGCGGTCATCCCCGAGGGCAAGCCGATCTATTGCGGCG CCAAGGCGGGTGATTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNKPAIRITEPSSKLSVTALLLPEKAPENVAFLLAYLTAPRVVPGIHAMWTGPEISCPVPSADLDGQSYARPLPAENATL TPQPGDIVLSYVPPRMWGGNPNAIFDIGLYYGQGARLLFPIGWLAGSVVAQVLPQEREQFAAACGVIRRNGACDITFSLV EA
Sequences:
>Translated_162_residues MNKPAIRITEPSSKLSVTALLLPEKAPENVAFLLAYLTAPRVVPGIHAMWTGPEISCPVPSADLDGQSYARPLPAENATL TPQPGDIVLSYVPPRMWGGNPNAIFDIGLYYGQGARLLFPIGWLAGSVVAQVLPQEREQFAAACGVIRRNGACDITFSLV EA >Mature_162_residues MNKPAIRITEPSSKLSVTALLLPEKAPENVAFLLAYLTAPRVVPGIHAMWTGPEISCPVPSADLDGQSYARPLPAENATL TPQPGDIVLSYVPPRMWGGNPNAIFDIGLYYGQGARLLFPIGWLAGSVVAQVLPQEREQFAAACGVIRRNGACDITFSLV EA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17312; Mature: 17312
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPAIRITEPSSKLSVTALLLPEKAPENVAFLLAYLTAPRVVPGIHAMWTGPEISCPVP CCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC SADLDGQSYARPLPAENATLTPQPGDIVLSYVPPRMWGGNPNAIFDIGLYYGQGARLLFP CCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEE IGWLAGSVVAQVLPQEREQFAAACGVIRRNGACDITFSLVEA HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MNKPAIRITEPSSKLSVTALLLPEKAPENVAFLLAYLTAPRVVPGIHAMWTGPEISCPVP CCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC SADLDGQSYARPLPAENATLTPQPGDIVLSYVPPRMWGGNPNAIFDIGLYYGQGARLLFP CCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEE IGWLAGSVVAQVLPQEREQFAAACGVIRRNGACDITFSLVEA HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA