| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475964
Identifier: 13475964
GI number: 13475964
Start: 5913252
End: 5913539
Strand: Reverse
Name: 13475964
Synonym: msl7161
Alternate gene names: NA
Gene position: 5913539-5913252 (Counterclockwise)
Preceding gene: 13475965
Following gene: 13475963
Centisome position: 84.05
GC content: 60.76
Gene sequence:
>288_bases ATGACATCTTCCCTCCTTGGTTTGGTTTGCCCCTCCTGCCGCGTCGCGCTCGTGATGAGCGAACGCCAGGGTATCGAGAT CGACTATTGTCCGCAGTGCCGTGGCGTCTGGCTTGATCGAGGCGAACTCGACAAGATCATCGAGCGTTCCGGCAGGGAGG CGTCGCCCGCGCCGCAGCCGGCAGCCTTCTCCCAGCCGCAACACGGCCGCGATGACGATTATTTGCGCTCGCAGGGCCAC CGCTATCCCAAGCGGAAGAAATCCTTCTTCGAGGAATTGTTCGATTGA
Upstream 100 bases:
>100_bases GACGATCGCTTCTGGTGATTGTGATGTCGGACCGCTTTAACGGGCCCGTTTCCACCTTTTTCGGTCAAGCGGGCTCAATC CTTTCGGTTTGGAGCCCCGT
Downstream 100 bases:
>100_bases CGCCCGGCGCCTGCTGAAACTTCCAAAAACCACATCGATAAAGGTTCACCTCCGATGATGTCTCGCACCAGCCGATTTGC AACCCTGTTTGCCGGACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTSSLLGLVCPSCRVALVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSGREASPAPQPAAFSQPQHGRDDDYLRSQGH RYPKRKKSFFEELFD
Sequences:
>Translated_95_residues MTSSLLGLVCPSCRVALVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSGREASPAPQPAAFSQPQHGRDDDYLRSQGH RYPKRKKSFFEELFD >Mature_94_residues TSSLLGLVCPSCRVALVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSGREASPAPQPAAFSQPQHGRDDDYLRSQGHR YPKRKKSFFEELFD
Specific function: Unknown
COG id: COG3809
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10858; Mature: 10727
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSLLGLVCPSCRVALVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSGREASPAPQP CCCCHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC AAFSQPQHGRDDDYLRSQGHRYPKRKKSFFEELFD CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TSSLLGLVCPSCRVALVMSERQGIEIDYCPQCRGVWLDRGELDKIIERSGREASPAPQP CCCHHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC AAFSQPQHGRDDDYLRSQGHRYPKRKKSFFEELFD CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA